RNA–Protein interactions for RNA: ENST00000634451.2

LINC00339-206, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-206ENST00000634451 KCTD9Q7L273 389 aa9.55□□□□□ -0.88
LINC00339-206ENST00000634451 SSX9Q7RTT3 188 aa9.55□□□□□ -0.88
LINC00339-206ENST00000634451 GPHB5Q86YW7 130 aa9.55□□□□□ -0.88
LINC00339-206ENST00000634451 MMD2Q8IY49 270 aa9.55□□□□□ -0.88
LINC00339-206ENST00000634451 C10orf67Q8IYJ2 551 aa9.55□□□□□ -0.88
LINC00339-206ENST00000634451 OR10R2Q8NGX6 335 aa9.55□□□□□ -0.88
LINC00339-206ENST00000634451 ZNF257Q9Y2Q1 563 aa9.55□□□□□ -0.88
LINC00339-206ENST00000634451 NUPR2A6NF83 97 aa9.54□□□□□ -0.88
LINC00339-206ENST00000634451 NPIPB5A8MRT5 1133 aa9.54□□□□□ -0.88
LINC00339-206ENST00000634451 KBTBD11O94819 623 aa9.54□□□□□ -0.88
LINC00339-206ENST00000634451 ZNF735P0CB33 412 aa9.54□□□□□ -0.88
LINC00339-206ENST00000634451 RPL35AP18077 110 aaKnown RBP9.54□□□□□ -0.88
LINC00339-206ENST00000634451 RPL27AP46776 148 aaKnown RBP9.54□□□□□ -0.88
LINC00339-206ENST00000634451 MRPS15P82914 257 aaKnown RBP9.54□□□□□ -0.88
LINC00339-206ENST00000634451 EIF4EBP1Q13541 118 aaPredicted RBP9.54□□□□□ -0.88
LINC00339-206ENST00000634451 TPBGQ13641 420 aa9.54□□□□□ -0.88
LINC00339-206ENST00000634451 ZNF124Q15973 351 aa9.54□□□□□ -0.88
LINC00339-206ENST00000634451 ZNF585BQ52M93 769 aa9.54□□□□□ -0.88
LINC00339-206ENST00000634451 OGFRL1Q5TC84 451 aaPredicted RBP9.54□□□□□ -0.88
LINC00339-206ENST00000634451 NR2C2APQ86WQ0 139 aa9.54□□□□□ -0.88
LINC00339-206ENST00000634451 PUSL1Q8N0Z8 303 aaKnown RBP9.54□□□□□ -0.88
LINC00339-206ENST00000634451 ADTRPQ96IZ2 230 aa9.54□□□□□ -0.88
LINC00339-206ENST00000634451 OR51E2Q9H255 320 aa9.54□□□□□ -0.88
LINC00339-206ENST00000634451 RAB22AQ9UL26 194 aa9.54□□□□□ -0.88
LINC00339-206ENST00000634451 SPATA2Q9UM82 520 aa9.54□□□□□ -0.88
LINC00339-206ENST00000634451 RBMX2Q9Y388 322 aaKnown RBP9.54□□□□□ -0.88
LINC00339-206ENST00000634451 V9GY05 133 aa9.54□□□□□ -0.88
LINC00339-206ENST00000634451 HECTD4Q9Y4D8 3996 aa9.54□□□□□ -0.88
LINC00339-206ENST00000634451 IGLV11-55A0A075B6I3 123 aa9.53□□□□□ -0.88
LINC00339-206ENST00000634451 IGHV3OR16-8A0A075B7F1 116 aa9.53□□□□□ -0.88
LINC00339-206ENST00000634451 TRAV3A0A0B4J244 114 aa9.53□□□□□ -0.88
LINC00339-206ENST00000634451 SPRY2O43597 315 aa9.53□□□□□ -0.88
LINC00339-206ENST00000634451 CLEC3BP05452 202 aa9.53□□□□□ -0.88
LINC00339-206ENST00000634451 PTHLHP12272 177 aa9.53□□□□□ -0.88
LINC00339-206ENST00000634451 RPA2P15927 270 aa9.53□□□□□ -0.88
LINC00339-206ENST00000634451 PSMB6P28072 239 aa9.53□□□□□ -0.88
LINC00339-206ENST00000634451 FCGR2BP31994 310 aaPredicted RBP9.53□□□□□ -0.88
LINC00339-206ENST00000634451 GPR183P32249 361 aa9.53□□□□□ -0.88
LINC00339-206ENST00000634451 ODF3L2Q3SX64 289 aa9.53□□□□□ -0.88
LINC00339-206ENST00000634451 ZNF645Q8N7E2 425 aa9.53□□□□□ -0.88
LINC00339-206ENST00000634451 TMEM167AQ8TBQ9 72 aa9.53□□□□□ -0.88
LINC00339-206ENST00000634451 NUDCD2Q8WVJ2 157 aa9.53□□□□□ -0.88
LINC00339-206ENST00000634451 SLC2A9Q9NRM0 540 aa9.53□□□□□ -0.88
LINC00339-206ENST00000634451 TAS2R8Q9NYW2 309 aa9.53□□□□□ -0.88
LINC00339-206ENST00000634451 DNAH6Q9C0G6 4158 aa9.52□□□□□ -0.89
LINC00339-206ENST00000634451 DPPA5A6NC42 116 aa9.52□□□□□ -0.89
LINC00339-206ENST00000634451 TNFSF12O43508 249 aa9.52□□□□□ -0.89
LINC00339-206ENST00000634451 CRYGCP07315 174 aa9.52□□□□□ -0.89
LINC00339-206ENST00000634451 C8orf88P0DMB2 117 aa9.52□□□□□ -0.89
LINC00339-206ENST00000634451 CTRB1P17538 263 aa9.52□□□□□ -0.89
LINC00339-206ENST00000634451 CRHBPP24387 322 aa9.52□□□□□ -0.89
LINC00339-206ENST00000634451 ARFRP1Q13795 201 aa9.52□□□□□ -0.89
LINC00339-206ENST00000634451 SSX1Q16384 188 aa9.52□□□□□ -0.89
LINC00339-206ENST00000634451 CTRB2Q6GPI1 263 aa9.52□□□□□ -0.89
LINC00339-206ENST00000634451 WFDC3Q8IUB2 231 aa9.52□□□□□ -0.89
LINC00339-206ENST00000634451 OR1L6Q8NGR2 347 aa9.52□□□□□ -0.89
LINC00339-206ENST00000634451 TCTEX1D2Q8WW35 142 aa9.52□□□□□ -0.89
LINC00339-206ENST00000634451 EEF1AKMT3Q96AZ1 226 aa9.52□□□□□ -0.89
LINC00339-206ENST00000634451 OR2A7Q96R45 310 aa9.52□□□□□ -0.89
LINC00339-206ENST00000634451 RYR1P21817 5038 aa9.51□□□□□ -0.89
LINC00339-206ENST00000634451 IGHV3-21A0A0B4J1V1 117 aa9.51□□□□□ -0.89
LINC00339-206ENST00000634451 ZNF207O43670 478 aaKnown RBP9.51□□□□□ -0.89
LINC00339-206ENST00000634451 ARL6IP5O75915 188 aa9.51□□□□□ -0.89
LINC00339-206ENST00000634451 DIRAS3O95661 229 aa9.51□□□□□ -0.89
LINC00339-206ENST00000634451 HLA-DQB1P01920 261 aa9.51□□□□□ -0.89
LINC00339-206ENST00000634451 FAM106AQ4KMX7 169 aa9.51□□□□□ -0.89
LINC00339-206ENST00000634451 FAM209BQ5JX69 171 aa9.51□□□□□ -0.89
LINC00339-206ENST00000634451 SLC25A42Q86VD7 318 aa9.51□□□□□ -0.89
LINC00339-206ENST00000634451 ZNF502Q8TBZ5 544 aa9.51□□□□□ -0.89
LINC00339-206ENST00000634451 PHLDA1Q8WV24 401 aaPredicted RBP9.51□□□□□ -0.89
LINC00339-206ENST00000634451 ZNF414Q96IQ9 312 aa9.51□□□□□ -0.89
LINC00339-206ENST00000634451 OR2W1Q9Y3N9 320 aa9.51□□□□□ -0.89
LINC00339-206ENST00000634451 IGLC7A0M8Q6 106 aa9.5□□□□□ -0.89
LINC00339-206ENST00000634451 IFITM5A6NNB3 132 aa9.5□□□□□ -0.89
LINC00339-206ENST00000634451 SSX5O60225 188 aa9.5□□□□□ -0.89
LINC00339-206ENST00000634451 BMI1P35226 326 aa9.5□□□□□ -0.89
LINC00339-206ENST00000634451 TALDO1P37837 337 aa9.5□□□□□ -0.89
LINC00339-206ENST00000634451 PSMD7P51665 324 aa9.5□□□□□ -0.89
LINC00339-206ENST00000634451 NANOS2P60321 138 aaKnown RBP9.5□□□□□ -0.89
LINC00339-206ENST00000634451 KLK9Q2XQG4 91 aa9.5□□□□□ -0.89
LINC00339-206ENST00000634451 ZNF773Q6PK81 442 aa9.5□□□□□ -0.89
LINC00339-206ENST00000634451 RBPMS2Q6ZRY4 209 aaKnown RBP9.5□□□□□ -0.89
LINC00339-206ENST00000634451 Q6ZS49 121 aa9.5□□□□□ -0.89
LINC00339-206ENST00000634451 Q6ZWC4 215 aa9.5□□□□□ -0.89
LINC00339-206ENST00000634451 OR5B3Q8NH48 314 aa9.5□□□□□ -0.89
LINC00339-206ENST00000634451 RNF183Q96D59 192 aa9.5□□□□□ -0.89
LINC00339-206ENST00000634451 C8orf4Q9NR00 106 aa9.5□□□□□ -0.89
LINC00339-206ENST00000634451 KLK9Q9UKQ9 250 aa9.5□□□□□ -0.89
LINC00339-206ENST00000634451 TMEM235A6NFC5 223 aa9.49□□□□□ -0.89
LINC00339-206ENST00000634451 CASQ2O14958 399 aaPredicted RBP9.49□□□□□ -0.89
LINC00339-206ENST00000634451 CREBL2O60519 120 aaPredicted RBP9.49□□□□□ -0.89
LINC00339-206ENST00000634451 FCER2P06734 321 aa9.49□□□□□ -0.89
LINC00339-206ENST00000634451 HLA-GP17693 338 aa9.49□□□□□ -0.89
LINC00339-206ENST00000634451 GADD45AP24522 165 aa9.49□□□□□ -0.89
LINC00339-206ENST00000634451 OR2B8PP59922 312 aa9.49□□□□□ -0.89
LINC00339-206ENST00000634451 RPL8P62917 257 aaKnown RBP9.49□□□□□ -0.89
LINC00339-206ENST00000634451 MLLT11Q13015 90 aaPredicted RBP9.49□□□□□ -0.89
LINC00339-206ENST00000634451 TIMM50Q3ZCQ8 353 aa9.49□□□□□ -0.89
LINC00339-206ENST00000634451 CDNFQ49AH0 187 aa9.49□□□□□ -0.89
LINC00339-206ENST00000634451 OR4A47Q6IF82 309 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms