RNA–Protein interactions for RNA: ENST00000629912.1

NEK3-211, Transcript of NIMA related kinase 3, humanhuman

TSL 5 BASIC

Gene NEK3, Length 141 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-211ENST00000629912 LILRB2Q8N423 598 aa4.54□□□□□ -1.68
NEK3-211ENST00000629912 LY6G5BQ8NDX9 201 aa4.54□□□□□ -1.68
NEK3-211ENST00000629912 OR10G4Q8NGN3 311 aa4.54□□□□□ -1.68
NEK3-211ENST00000629912 OR13D1Q8NGV5 346 aa4.54□□□□□ -1.68
NEK3-211ENST00000629912 OR4A5Q8NH83 315 aa4.54□□□□□ -1.68
NEK3-211ENST00000629912 OR9G1Q8NH87 305 aa4.54□□□□□ -1.68
NEK3-211ENST00000629912 H1FXQ92522 213 aaKnown RBP4.54□□□□□ -1.68
NEK3-211ENST00000629912 LHX4Q969G2 390 aa4.54□□□□□ -1.68
NEK3-211ENST00000629912 ZDHHC16Q969W1 377 aa4.54□□□□□ -1.68
NEK3-211ENST00000629912 NABP2Q9BQ15 211 aa4.54□□□□□ -1.68
NEK3-211ENST00000629912 EIF5A2Q9GZV4 153 aaKnown RBP4.54□□□□□ -1.68
NEK3-211ENST00000629912 SLC35B3Q9H1N7 401 aa4.54□□□□□ -1.68
NEK3-211ENST00000629912 TMEM231Q9H6L2 316 aa4.54□□□□□ -1.68
NEK3-211ENST00000629912 HEYLQ9NQ87 328 aaPredicted RBP4.54□□□□□ -1.68
NEK3-211ENST00000629912 SLC35D1Q9NTN3 355 aa4.54□□□□□ -1.68
NEK3-211ENST00000629912 BET1LQ9NYM9 111 aa4.54□□□□□ -1.68
NEK3-211ENST00000629912 MIOXQ9UGB7 285 aa4.54□□□□□ -1.68
NEK3-211ENST00000629912 TCF19Q9Y242 345 aa4.54□□□□□ -1.68
NEK3-211ENST00000629912 WDR83OSQ9Y284 106 aa4.54□□□□□ -1.68
NEK3-211ENST00000629912 PKDREJQ9NTG1 2253 aa4.54□□□□□ -1.68
NEK3-211ENST00000629912 SPTA1P02549 2419 aa4.53□□□□□ -1.68
NEK3-211ENST00000629912 TEX50A0A1B0GTY4 177 aa4.53□□□□□ -1.68
NEK3-211ENST00000629912 SRRM4A7MD48 611 aaKnown RBP4.53□□□□□ -1.68
NEK3-211ENST00000629912 PRSS46E5RG02 174 aa4.53□□□□□ -1.68
NEK3-211ENST00000629912 C17orf112F2Z3M2 114 aa4.53□□□□□ -1.68
NEK3-211ENST00000629912 INS-IGF2F8WCM5 200 aa4.53□□□□□ -1.68
NEK3-211ENST00000629912 H0YJW9 148 aa4.53□□□□□ -1.68
NEK3-211ENST00000629912 IFNA10P01566 189 aa4.53□□□□□ -1.68
NEK3-211ENST00000629912 APOA2P02652 100 aa4.53□□□□□ -1.68
NEK3-211ENST00000629912 HSPB1P04792 205 aaKnown RBP4.53□□□□□ -1.68
NEK3-211ENST00000629912 CD1BP29016 333 aa4.53□□□□□ -1.68
NEK3-211ENST00000629912 PRRX1P54821 245 aa4.53□□□□□ -1.68
NEK3-211ENST00000629912 OR2B8PP59922 312 aa4.53□□□□□ -1.68
NEK3-211ENST00000629912 ERVFRD-1P60508 538 aa4.53□□□□□ -1.68
NEK3-211ENST00000629912 TMEM249Q2WGJ8 235 aa4.53□□□□□ -1.68
NEK3-211ENST00000629912 OR8G2PQ6IF36 304 aa4.53□□□□□ -1.68
NEK3-211ENST00000629912 ETV3LQ6ZN32 361 aa4.53□□□□□ -1.68
NEK3-211ENST00000629912 SSX9Q7RTT3 188 aa4.53□□□□□ -1.68
NEK3-211ENST00000629912 DTX2Q86UW9 622 aa4.53□□□□□ -1.68
NEK3-211ENST00000629912 PDPNQ86YL7 162 aa4.53□□□□□ -1.68
NEK3-211ENST00000629912 VKORC1L1Q8N0U8 176 aa4.53□□□□□ -1.68
NEK3-211ENST00000629912 ABHD12Q8N2K0 398 aa4.53□□□□□ -1.68
NEK3-211ENST00000629912 CLRN3Q8NCR9 226 aa4.53□□□□□ -1.68
NEK3-211ENST00000629912 CLDND2Q8NHS1 167 aa4.53□□□□□ -1.68
NEK3-211ENST00000629912 SFT2D1Q8WV19 159 aa4.53□□□□□ -1.68
NEK3-211ENST00000629912 RAB1CQ92928 201 aa4.53□□□□□ -1.68
NEK3-211ENST00000629912 NEIL1Q96FI4 390 aaPredicted RBP4.53□□□□□ -1.68
NEK3-211ENST00000629912 RSG1Q9BU20 258 aa4.53□□□□□ -1.68
NEK3-211ENST00000629912 TMEM133Q9H2Q1 129 aa4.53□□□□□ -1.68
NEK3-211ENST00000629912 UNKLQ9H9P5 680 aaKnown RBP4.53□□□□□ -1.68
NEK3-211ENST00000629912 OR51B2Q9Y5P1 312 aa4.53□□□□□ -1.68
NEK3-211ENST00000629912 ABCA4P78363 2273 aa4.53□□□□□ -1.68
NEK3-211ENST00000629912 MALRD1Q5VYJ5 2156 aa4.53□□□□□ -1.68
NEK3-211ENST00000629912 TNCP24821 2201 aa4.52□□□□□ -1.69
NEK3-211ENST00000629912 CTXND1A0A1B0GTU2 59 aa4.52□□□□□ -1.69
NEK3-211ENST00000629912 UBE2L5PA0A1B0GUS4 154 aa4.52□□□□□ -1.69
NEK3-211ENST00000629912 LOC102723971A0A1B0GUV8 181 aa4.52□□□□□ -1.69
NEK3-211ENST00000629912 hCG_1809904A0A1W2PP81 198 aa4.52□□□□□ -1.69
NEK3-211ENST00000629912 A0A1W2PPE2 198 aa4.52□□□□□ -1.69
NEK3-211ENST00000629912 A0A1W2PR64 198 aa4.52□□□□□ -1.69
NEK3-211ENST00000629912 A0A1W2PRV1 198 aa4.52□□□□□ -1.69
NEK3-211ENST00000629912 MED19A0JLT2 244 aaPredicted RBP4.52□□□□□ -1.69
NEK3-211ENST00000629912 LYNX1G3V0Z9 82 aa4.52□□□□□ -1.69
NEK3-211ENST00000629912 H7C2Y5 167 aa4.52□□□□□ -1.69
NEK3-211ENST00000629912 RRHO14718 337 aa4.52□□□□□ -1.69
NEK3-211ENST00000629912 CYB5BO43169 146 aa4.52□□□□□ -1.69
NEK3-211ENST00000629912 IGLV1-47P01700 117 aa4.52□□□□□ -1.69
NEK3-211ENST00000629912 IGKV1-16P04430 117 aa4.52□□□□□ -1.69
NEK3-211ENST00000629912 SRP19P09132 144 aaKnown RBP4.52□□□□□ -1.69
NEK3-211ENST00000629912 LYNX1P0DP58 116 aa4.52□□□□□ -1.69
NEK3-211ENST00000629912 FGF7P21781 194 aa4.52□□□□□ -1.69
NEK3-211ENST00000629912 IL3RAP26951 378 aa4.52□□□□□ -1.69
NEK3-211ENST00000629912 TAGLN2P37802 199 aaKnown RBP4.52□□□□□ -1.69
NEK3-211ENST00000629912 LGALS7P47929 136 aa4.52□□□□□ -1.69
NEK3-211ENST00000629912 PRCDQ00LT1 54 aa4.52□□□□□ -1.69
NEK3-211ENST00000629912 ICAM4Q14773 271 aa4.52□□□□□ -1.69
NEK3-211ENST00000629912 ZNF726P1Q15940 193 aa4.52□□□□□ -1.69
NEK3-211ENST00000629912 BSXQ3C1V8 233 aa4.52□□□□□ -1.69
NEK3-211ENST00000629912 C2orf83Q53S99 150 aa4.52□□□□□ -1.69
NEK3-211ENST00000629912 WDR25Q64LD2 544 aaPredicted RBP4.52□□□□□ -1.69
NEK3-211ENST00000629912 RBMS3Q6XE24 437 aaKnown RBP4.52□□□□□ -1.69
NEK3-211ENST00000629912 C1orf122Q6ZSJ8 110 aa4.52□□□□□ -1.69
NEK3-211ENST00000629912 RPP25LQ8N5L8 163 aaKnown RBP4.52□□□□□ -1.69
NEK3-211ENST00000629912 Q8N7P7 452 aa4.52□□□□□ -1.69
NEK3-211ENST00000629912 ZNF709Q8N972 641 aa4.52□□□□□ -1.69
NEK3-211ENST00000629912 TEX45Q8NA69 505 aa4.52□□□□□ -1.69
NEK3-211ENST00000629912 BEND2Q8NDZ0 799 aa4.52□□□□□ -1.69
NEK3-211ENST00000629912 OR4C13Q8NGP0 309 aa4.52□□□□□ -1.69
NEK3-211ENST00000629912 OR10X1Q8NGY0 326 aa4.52□□□□□ -1.69
NEK3-211ENST00000629912 OR5B3Q8NH48 314 aa4.52□□□□□ -1.69
NEK3-211ENST00000629912 VSTM2AQ8TAG5 236 aa4.52□□□□□ -1.69
NEK3-211ENST00000629912 TMEM167AQ8TBQ9 72 aa4.52□□□□□ -1.69
NEK3-211ENST00000629912 TMEM170AQ8WVE7 144 aa4.52□□□□□ -1.69
NEK3-211ENST00000629912 ITLN2Q8WWU7 325 aaPredicted RBP4.52□□□□□ -1.69
NEK3-211ENST00000629912 FLYWCH2Q96CP2 140 aaKnown RBP4.52□□□□□ -1.69
NEK3-211ENST00000629912 TIMD4Q96H15 378 aa4.52□□□□□ -1.69
NEK3-211ENST00000629912 RCC1LQ96I51 464 aaKnown RBP4.52□□□□□ -1.69
NEK3-211ENST00000629912 P2RX4Q99571 388 aa4.52□□□□□ -1.69
NEK3-211ENST00000629912 RNF5Q99942 180 aa4.52□□□□□ -1.69
NEK3-211ENST00000629912 RARRES2Q99969 163 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms