RNA–Protein interactions for RNA: ENST00000629380.2

SYNGAP1-208, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SYNGAP1, Length 9,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-208ENST00000629380 CGB1A6NKQ9 187 aa11.39□□□□□ -0.59
SYNGAP1-208ENST00000629380 DCAF10Q5QP82 559 aa11.39□□□□□ -0.59
SYNGAP1-208ENST00000629380 ZNF385CQ66K41 422 aaPredicted RBP11.39□□□□□ -0.59
SYNGAP1-208ENST00000629380 G6PC2Q9NQR9 355 aa11.39□□□□□ -0.59
SYNGAP1-208ENST00000629380 AGRNO00468 2067 aa11.39□□□□□ -0.59
SYNGAP1-208ENST00000629380 OR4C45A6NMZ5 311 aa11.39□□□□□ -0.59
SYNGAP1-208ENST00000629380 PRRC2AP48634 2157 aaKnown RBP11.38□□□□□ -0.59
SYNGAP1-208ENST00000629380 CDC42EP2O14613 210 aa11.38□□□□□ -0.59
SYNGAP1-208ENST00000629380 FCGR2BP31994 310 aaPredicted RBP11.38□□□□□ -0.59
SYNGAP1-208ENST00000629380 IGKV3D-15A0A087WSY6 115 aa11.38□□□□□ -0.59
SYNGAP1-208ENST00000629380 A0A0G2JLM5 398 aa11.38□□□□□ -0.59
SYNGAP1-208ENST00000629380 IGKV3-15P01624 115 aa11.38□□□□□ -0.59
SYNGAP1-208ENST00000629380 ZNF324BQ6AW86 544 aaPredicted RBP11.38□□□□□ -0.59
SYNGAP1-208ENST00000629380 CLDND2Q8NHS1 167 aa11.38□□□□□ -0.59
SYNGAP1-208ENST00000629380 FMC1Q96HJ9 113 aa11.38□□□□□ -0.59
SYNGAP1-208ENST00000629380 LINC00470Q9BZP3 86 aa11.38□□□□□ -0.59
SYNGAP1-208ENST00000629380 HOXA3O43365 443 aaPredicted RBP11.38□□□□□ -0.59
SYNGAP1-208ENST00000629380 MYF5P13349 255 aa11.38□□□□□ -0.59
SYNGAP1-208ENST00000629380 DTX1Q86Y01 620 aa11.38□□□□□ -0.59
SYNGAP1-208ENST00000629380 TNFRSF12AQ9NP84 129 aa11.38□□□□□ -0.59
SYNGAP1-208ENST00000629380 PRR33A8MZF0 331 aa11.38□□□□□ -0.59
SYNGAP1-208ENST00000629380 CRPP02741 224 aa11.38□□□□□ -0.59
SYNGAP1-208ENST00000629380 SAXO1Q8IYX7 474 aa11.38□□□□□ -0.59
SYNGAP1-208ENST00000629380 RGP1Q92546 391 aaPredicted RBP11.38□□□□□ -0.59
SYNGAP1-208ENST00000629380 KIAA1671Q9BY89 1806 aa11.38□□□□□ -0.59
SYNGAP1-208ENST00000629380 NPIPB11E5RHQ5 1161 aa11.38□□□□□ -0.59
SYNGAP1-208ENST00000629380 ST6GAL2Q96JF0 529 aa11.38□□□□□ -0.59
SYNGAP1-208ENST00000629380 RNF115Q9Y4L5 304 aa11.38□□□□□ -0.59
SYNGAP1-208ENST00000629380 IGKV3OR2-268A0A0C4DH90 116 aa11.38□□□□□ -0.59
SYNGAP1-208ENST00000629380 TMEM50AO95807 157 aa11.38□□□□□ -0.59
SYNGAP1-208ENST00000629380 SRIP30626 198 aa11.38□□□□□ -0.59
SYNGAP1-208ENST00000629380 TRBV20OR9-2A0A075B6H5 130 aa11.37□□□□□ -0.59
SYNGAP1-208ENST00000629380 MPZL1O95297 269 aa11.37□□□□□ -0.59
SYNGAP1-208ENST00000629380 PRSS53Q2L4Q9 553 aa11.37□□□□□ -0.59
SYNGAP1-208ENST00000629380 DTX2Q86UW9 622 aa11.37□□□□□ -0.59
SYNGAP1-208ENST00000629380 HDHD3Q9BSH5 251 aaPredicted RBP11.37□□□□□ -0.59
SYNGAP1-208ENST00000629380 IGHV5-10-1A0A0J9YXX1 117 aa11.37□□□□□ -0.59
SYNGAP1-208ENST00000629380 CD1AP06126 327 aa11.37□□□□□ -0.59
SYNGAP1-208ENST00000629380 ST6GALNAC2Q9UJ37 374 aa11.37□□□□□ -0.59
SYNGAP1-208ENST00000629380 SLC25A53Q5H9E4 307 aa11.37□□□□□ -0.59
SYNGAP1-208ENST00000629380 FAM27BQ5VT28 67 aa11.37□□□□□ -0.59
SYNGAP1-208ENST00000629380 FGF12P61328 243 aa11.37□□□□□ -0.59
SYNGAP1-208ENST00000629380 AMER3Q8N944 861 aa11.37□□□□□ -0.59
SYNGAP1-208ENST00000629380 YAE1D1Q9NRH1 226 aa11.37□□□□□ -0.59
SYNGAP1-208ENST00000629380 V9GYH0 126 aa11.37□□□□□ -0.59
SYNGAP1-208ENST00000629380 SPAARA0A1B0GVQ0 90 aa11.37□□□□□ -0.59
SYNGAP1-208ENST00000629380 NGFRP08138 427 aa11.37□□□□□ -0.59
SYNGAP1-208ENST00000629380 CYB5R2Q6BCY4 276 aa11.37□□□□□ -0.59
SYNGAP1-208ENST00000629380 KLK15Q9H2R5 256 aa11.37□□□□□ -0.59
SYNGAP1-208ENST00000629380 SYNGR3O43761 229 aa11.37□□□□□ -0.59
SYNGAP1-208ENST00000629380 THY1P04216 161 aa11.37□□□□□ -0.59
SYNGAP1-208ENST00000629380 DRD3P35462 400 aa11.37□□□□□ -0.59
SYNGAP1-208ENST00000629380 TMEM170BQ5T4T1 132 aa11.37□□□□□ -0.59
SYNGAP1-208ENST00000629380 LINC01555Q8NAE3 123 aa11.37□□□□□ -0.59
SYNGAP1-208ENST00000629380 ASPDHA6ND91 283 aa11.37□□□□□ -0.59
SYNGAP1-208ENST00000629380 TTTY12Q9BZ98 90 aa11.37□□□□□ -0.59
SYNGAP1-208ENST00000629380 PTPRQQ9UMZ3 2332 aa11.37□□□□□ -0.59
SYNGAP1-208ENST00000629380 NPPCP23582 126 aa11.37□□□□□ -0.59
SYNGAP1-208ENST00000629380 SPAG8Q99932 426 aaPredicted RBP11.37□□□□□ -0.59
SYNGAP1-208ENST00000629380 FOXC2Q99958 501 aa11.37□□□□□ -0.59
SYNGAP1-208ENST00000629380 RRHO14718 337 aa11.36□□□□□ -0.59
SYNGAP1-208ENST00000629380 AGAP20933 346 aa11.36□□□□□ -0.59
SYNGAP1-208ENST00000629380 MVDP53602 400 aa11.36□□□□□ -0.59
SYNGAP1-208ENST00000629380 TNFRSF9Q07011 255 aa11.36□□□□□ -0.59
SYNGAP1-208ENST00000629380 EAF1Q96JC9 268 aaPredicted RBP11.36□□□□□ -0.59
SYNGAP1-208ENST00000629380 KCNS1Q96KK3 526 aa11.36□□□□□ -0.59
SYNGAP1-208ENST00000629380 ALX4Q9H161 411 aaPredicted RBP11.36□□□□□ -0.59
SYNGAP1-208ENST00000629380 PTGDSP41222 190 aa11.36□□□□□ -0.59
SYNGAP1-208ENST00000629380 CSPG4Q6UVK1 2322 aa11.36□□□□□ -0.59
SYNGAP1-208ENST00000629380 PATE4P0C8F1 98 aa11.36□□□□□ -0.59
SYNGAP1-208ENST00000629380 FCARP24071 287 aa11.36□□□□□ -0.59
SYNGAP1-208ENST00000629380 OR51M1Q9H341 326 aa11.36□□□□□ -0.59
SYNGAP1-208ENST00000629380 RCC1P18754 421 aaPredicted RBP11.36□□□□□ -0.59
SYNGAP1-208ENST00000629380 CXCL3P19876 107 aa11.36□□□□□ -0.59
SYNGAP1-208ENST00000629380 PDLIM4P50479 330 aa11.36□□□□□ -0.59
SYNGAP1-208ENST00000629380 C19orf67A6NJJ6 358 aa11.36□□□□□ -0.59
SYNGAP1-208ENST00000629380 HCP5Q6MZN7 132 aa11.36□□□□□ -0.59
SYNGAP1-208ENST00000629380 PRR13Q9NZ81 148 aa11.36□□□□□ -0.59
SYNGAP1-208ENST00000629380 HOXB1P14653 301 aaPredicted RBP11.35□□□□□ -0.59
SYNGAP1-208ENST00000629380 TGIF2-C20orf24A0A0A6YYL0 155 aa11.35□□□□□ -0.59
SYNGAP1-208ENST00000629380 BGLAPP02818 100 aa11.35□□□□□ -0.59
SYNGAP1-208ENST00000629380 SP9P0CG40 484 aa11.35□□□□□ -0.59
SYNGAP1-208ENST00000629380 ACSF3Q4G176 576 aaPredicted RBP11.35□□□□□ -0.59
SYNGAP1-208ENST00000629380 KLK13Q9UKR3 277 aa11.35□□□□□ -0.59
SYNGAP1-208ENST00000629380 A0A1B0GV90 55 aa11.35□□□□□ -0.59
SYNGAP1-208ENST00000629380 MPV17P39210 176 aa11.35□□□□□ -0.59
SYNGAP1-208ENST00000629380 HIST1H2BAQ96A08 127 aa11.35□□□□□ -0.59
SYNGAP1-208ENST00000629380 RHOVQ96L33 236 aa11.35□□□□□ -0.59
SYNGAP1-208ENST00000629380 LOC105371242A0A075B767 164 aa11.35□□□□□ -0.59
SYNGAP1-208ENST00000629380 ODAMA1E959 279 aa11.35□□□□□ -0.59
SYNGAP1-208ENST00000629380 AHRRA9YTQ3 701 aa11.35□□□□□ -0.59
SYNGAP1-208ENST00000629380 MUC1P15941 1255 aaPredicted RBP11.35□□□□□ -0.59
SYNGAP1-208ENST00000629380 VKORC1L1Q8N0U8 176 aa11.35□□□□□ -0.59
SYNGAP1-208ENST00000629380 NRXN2Q9P2S2 1712 aa11.35□□□□□ -0.59
SYNGAP1-208ENST00000629380 C8orf88P0DMB2 117 aa11.35□□□□□ -0.59
SYNGAP1-208ENST00000629380 GDF15Q99988 308 aa11.35□□□□□ -0.59
SYNGAP1-208ENST00000629380 MOSPD3O75425 235 aa11.35□□□□□ -0.59
SYNGAP1-208ENST00000629380 FAM209BQ5JX69 171 aa11.35□□□□□ -0.59
SYNGAP1-208ENST00000629380 OR11H7Q8NGC8 314 aa11.35□□□□□ -0.59
SYNGAP1-208ENST00000629380 A0A0G2JMZ2 1700 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms