RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 ZNF818PQ6ZRF7 136 aa17.25■□□□□ 0.35
SF1-220ENST00000626028 TMEM17Q86X19 198 aa17.25■□□□□ 0.35
SF1-220ENST00000626028 CMTM1Q8IZ96 169 aa17.25■□□□□ 0.35
SF1-220ENST00000626028 DCUN1D4Q92564 292 aa17.25■□□□□ 0.35
SF1-220ENST00000626028 ZNF2Q9BSG1 426 aaPredicted RBP17.25■□□□□ 0.35
SF1-220ENST00000626028 ALX4Q9H161 411 aaPredicted RBP17.25■□□□□ 0.35
SF1-220ENST00000626028 PLEKHA2Q9HB19 425 aa17.25■□□□□ 0.35
SF1-220ENST00000626028 COA4Q9NYJ1 87 aa17.25■□□□□ 0.35
SF1-220ENST00000626028 IGHV4OR15-8A0A075B7B6 117 aa17.24■□□□□ 0.35
SF1-220ENST00000626028 A0A087WW49 117 aa17.24■□□□□ 0.35
SF1-220ENST00000626028 TNFSF12O43508 249 aa17.24■□□□□ 0.35
SF1-220ENST00000626028 PMP2P02689 132 aa17.24■□□□□ 0.35
SF1-220ENST00000626028 HRH1P35367 487 aa17.24■□□□□ 0.35
SF1-220ENST00000626028 FAM209BQ5JX69 171 aa17.24■□□□□ 0.35
SF1-220ENST00000626028 TTC9CQ8N5M4 171 aa17.24■□□□□ 0.35
SF1-220ENST00000626028 RAB2BQ8WUD1 216 aa17.24■□□□□ 0.35
SF1-220ENST00000626028 COMMD9Q9P000 198 aa17.24■□□□□ 0.35
SF1-220ENST00000626028 WI2-2373I1.2A0A1W2PRP0 233 aa17.23■□□□□ 0.35
SF1-220ENST00000626028 FAM223BA6NKX1 122 aa17.23■□□□□ 0.35
SF1-220ENST00000626028 IGHV3-11P01762 117 aa17.23■□□□□ 0.35
SF1-220ENST00000626028 NQO2P16083 231 aa17.23■□□□□ 0.35
SF1-220ENST00000626028 ZNF343Q6P1L6 599 aa17.23■□□□□ 0.35
SF1-220ENST00000626028 FAM223AQ8IWN6 122 aa17.23■□□□□ 0.35
SF1-220ENST00000626028 VKORC1L1Q8N0U8 176 aa17.23■□□□□ 0.35
SF1-220ENST00000626028 CADM3Q8N126 398 aa17.23■□□□□ 0.35
SF1-220ENST00000626028 DLX4Q92988 240 aaPredicted RBP17.23■□□□□ 0.35
SF1-220ENST00000626028 ZNF257Q9Y2Q1 563 aa17.23■□□□□ 0.35
SF1-220ENST00000626028 TRBV9A0A0B4J1U6 114 aa17.22■□□□□ 0.35
SF1-220ENST00000626028 FAM25AB3EWG3 89 aa17.22■□□□□ 0.35
SF1-220ENST00000626028 FAM25CB3EWG5 89 aa17.22■□□□□ 0.35
SF1-220ENST00000626028 FAM25GB3EWG6 89 aa17.22■□□□□ 0.35
SF1-220ENST00000626028 S100GP29377 79 aa17.22■□□□□ 0.35
SF1-220ENST00000626028 TMBIM6P55061 237 aa17.22■□□□□ 0.35
SF1-220ENST00000626028 RPL8P62917 257 aaKnown RBP17.22■□□□□ 0.35
SF1-220ENST00000626028 AADACL3Q5VUY0 350 aa17.22■□□□□ 0.35
SF1-220ENST00000626028 ACSM6Q6P461 480 aa17.22■□□□□ 0.35
SF1-220ENST00000626028 SNX29P2Q8IUI4 249 aa17.22■□□□□ 0.35
SF1-220ENST00000626028 GPHA2Q96T91 129 aa17.22■□□□□ 0.35
SF1-220ENST00000626028 FAM212BQ9NTI7 297 aaPredicted RBP17.22■□□□□ 0.35
SF1-220ENST00000626028 GPR31O00270 319 aa17.21■□□□□ 0.35
SF1-220ENST00000626028 ZNF735P0CB33 412 aa17.21■□□□□ 0.35
SF1-220ENST00000626028 TBPP20226 339 aa17.21■□□□□ 0.35
SF1-220ENST00000626028 HLA-DMAP28067 261 aa17.21■□□□□ 0.35
SF1-220ENST00000626028 RPL27AP46776 148 aaKnown RBP17.21■□□□□ 0.35
SF1-220ENST00000626028 SLURP1P55000 103 aa17.21■□□□□ 0.35
SF1-220ENST00000626028 TSPAN5P62079 268 aa17.21■□□□□ 0.35
SF1-220ENST00000626028 VAX1Q5SQQ9 334 aa17.21■□□□□ 0.35
SF1-220ENST00000626028 OR4A47Q6IF82 309 aa17.21■□□□□ 0.35
SF1-220ENST00000626028 NECAP1Q8NC96 275 aa17.21■□□□□ 0.35
SF1-220ENST00000626028 SLC2A9Q9NRM0 540 aa17.21■□□□□ 0.35
SF1-220ENST00000626028 NPIPB5A8MRT5 1133 aa17.2■□□□□ 0.34
SF1-220ENST00000626028 PGLYRP1O75594 196 aaPredicted RBP17.2■□□□□ 0.34
SF1-220ENST00000626028 DHFRP00374 187 aa17.2■□□□□ 0.34
SF1-220ENST00000626028 F2RP25116 425 aa17.2■□□□□ 0.34
SF1-220ENST00000626028 UCP3P55916 312 aa17.2■□□□□ 0.34
SF1-220ENST00000626028 OR51H1Q8NH63 302 aa17.2■□□□□ 0.34
SF1-220ENST00000626028 SRSF8Q9BRL6 282 aaKnown RBP17.2■□□□□ 0.34
SF1-220ENST00000626028 PEF1Q9UBV8 284 aaKnown RBP17.2■□□□□ 0.34
SF1-220ENST00000626028 COL7A1Q02388 2944 aa17.19■□□□□ 0.34
SF1-220ENST00000626028 TEX22C9J3V5 150 aa17.19■□□□□ 0.34
SF1-220ENST00000626028 IL6RP08887 468 aaPredicted RBP17.19■□□□□ 0.34
SF1-220ENST00000626028 HLA-GP17693 338 aa17.19■□□□□ 0.34
SF1-220ENST00000626028 RPL5P46777 297 aaKnown RBP17.19■□□□□ 0.34
SF1-220ENST00000626028 KLK9Q2XQG4 91 aa17.19■□□□□ 0.34
SF1-220ENST00000626028 DEFB121Q5J5C9 76 aa17.19■□□□□ 0.34
SF1-220ENST00000626028 DGCR14Q96DF8 476 aaKnown RBP17.19■□□□□ 0.34
SF1-220ENST00000626028 HRASLSQ9HDD0 168 aa17.19■□□□□ 0.34
SF1-220ENST00000626028 RABL2AQ9UBK7 228 aaPredicted RBP17.19■□□□□ 0.34
SF1-220ENST00000626028 EXTL2Q9UBQ6 330 aa17.19■□□□□ 0.34
SF1-220ENST00000626028 KLK9Q9UKQ9 250 aa17.19■□□□□ 0.34
SF1-220ENST00000626028 RABL2BQ9UNT1 228 aa17.19■□□□□ 0.34
SF1-220ENST00000626028 ZNF256Q9Y2P7 627 aaPredicted RBP17.19■□□□□ 0.34
SF1-220ENST00000626028 CRYGCP07315 174 aa17.18■□□□□ 0.34
SF1-220ENST00000626028 APELAP0DMC3 54 aa17.18■□□□□ 0.34
SF1-220ENST00000626028 ECI1P42126 302 aa17.18■□□□□ 0.34
SF1-220ENST00000626028 MRPS10P82664 201 aaKnown RBP17.18■□□□□ 0.34
SF1-220ENST00000626028 SSBP1Q04837 148 aaKnown RBP17.18■□□□□ 0.34
SF1-220ENST00000626028 C10orf55Q5SWW7 151 aa17.18■□□□□ 0.34
SF1-220ENST00000626028 THOC7Q6I9Y2 204 aaKnown RBP17.18■□□□□ 0.34
SF1-220ENST00000626028 SSX9Q7RTT3 188 aa17.18■□□□□ 0.34
SF1-220ENST00000626028 ELOVL1Q9BW60 279 aa17.18■□□□□ 0.34
SF1-220ENST00000626028 FXYD6Q9H0Q3 95 aa17.18■□□□□ 0.34
SF1-220ENST00000626028 MTFP1Q9UDX5 166 aa17.18■□□□□ 0.34
SF1-220ENST00000626028 DPPA5A6NC42 116 aa17.17■□□□□ 0.34
SF1-220ENST00000626028 SAP30O75446 220 aa17.17■□□□□ 0.34
SF1-220ENST00000626028 RLN1P04808 185 aa17.17■□□□□ 0.34
SF1-220ENST00000626028 ERVK-16P61578 105 aa17.17■□□□□ 0.34
SF1-220ENST00000626028 RHOGP84095 191 aa17.17■□□□□ 0.34
SF1-220ENST00000626028 KLF5Q13887 457 aaPredicted RBP17.17■□□□□ 0.34
SF1-220ENST00000626028 CLVS1Q8IUQ0 354 aaPredicted RBP17.17■□□□□ 0.34
SF1-220ENST00000626028 SLC38A6Q8IZM9 456 aa17.17■□□□□ 0.34
SF1-220ENST00000626028 ARRDC1Q8N5I2 433 aa17.17■□□□□ 0.34
SF1-220ENST00000626028 OR6Q1Q8NGQ2 317 aa17.17■□□□□ 0.34
SF1-220ENST00000626028 FCAMRQ8WWV6 532 aa17.17■□□□□ 0.34
SF1-220ENST00000626028 OR4C12Q96R67 309 aa17.17■□□□□ 0.34
SF1-220ENST00000626028 RSRP1Q9BUV0 290 aa17.17■□□□□ 0.34
SF1-220ENST00000626028 AKIP1Q9NQ31 210 aa17.17■□□□□ 0.34
SF1-220ENST00000626028 CCDC59Q9P031 241 aaKnown RBP17.17■□□□□ 0.34
SF1-220ENST00000626028 UPK2O00526 184 aa17.16■□□□□ 0.34
SF1-220ENST00000626028 RGS5O15539 181 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms