RNA–Protein interactions for RNA: ENST00000624341.3

ERCC6-213, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

TSL 1 (best)

Gene ERCC6, Length 5,761 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-213ENST00000624341 CDC42EP3Q9UKI2 254 aa4.8□□□□□ -1.64
ERCC6-213ENST00000624341 F11RQ9Y624 299 aaKnown RBP4.8□□□□□ -1.64
ERCC6-213ENST00000624341 FGF16O43320 207 aa4.79□□□□□ -1.64
ERCC6-213ENST00000624341 HIST1H2BKO60814 126 aa4.79□□□□□ -1.64
ERCC6-213ENST00000624341 HIST1H2BJP06899 126 aa4.79□□□□□ -1.64
ERCC6-213ENST00000624341 FGF5P12034 268 aa4.79□□□□□ -1.64
ERCC6-213ENST00000624341 HIST1H2BOP23527 126 aa4.79□□□□□ -1.64
ERCC6-213ENST00000624341 UCP1P25874 307 aa4.79□□□□□ -1.64
ERCC6-213ENST00000624341 HIST1H2BBP33778 126 aa4.79□□□□□ -1.64
ERCC6-213ENST00000624341 HIST1H2BDP58876 126 aa4.79□□□□□ -1.64
ERCC6-213ENST00000624341 HIST1H2BCP62807 126 aa4.79□□□□□ -1.64
ERCC6-213ENST00000624341 TRIP6Q15654 476 aaKnown RBP4.79□□□□□ -1.64
ERCC6-213ENST00000624341 HIST2H2BEQ16778 126 aa4.79□□□□□ -1.64
ERCC6-213ENST00000624341 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.79□□□□□ -1.64
ERCC6-213ENST00000624341 STPG3Q8N7X2 389 aa4.79□□□□□ -1.64
ERCC6-213ENST00000624341 SRSF12Q8WXF0 261 aaKnown RBP4.79□□□□□ -1.64
ERCC6-213ENST00000624341 HIST1H2BHQ93079 126 aa4.79□□□□□ -1.64
ERCC6-213ENST00000624341 ST6GALNAC6Q969X2 333 aa4.79□□□□□ -1.64
ERCC6-213ENST00000624341 HIST1H2BNQ99877 126 aa4.79□□□□□ -1.64
ERCC6-213ENST00000624341 HIST1H2BMQ99879 126 aa4.79□□□□□ -1.64
ERCC6-213ENST00000624341 TM2D1Q9BX74 207 aa4.79□□□□□ -1.64
ERCC6-213ENST00000624341 RALYQ9UKM9 306 aaKnown RBP4.79□□□□□ -1.64
ERCC6-213ENST00000624341 NPIPB13A6NJU9 1138 aa4.79□□□□□ -1.64
ERCC6-213ENST00000624341 NPIPB4C9JG80 1138 aa4.79□□□□□ -1.64
ERCC6-213ENST00000624341 CRXO43186 299 aaPredicted RBP4.79□□□□□ -1.64
ERCC6-213ENST00000624341 SNAI2O43623 268 aa4.79□□□□□ -1.64
ERCC6-213ENST00000624341 HLA-DRB1P01911 266 aa4.79□□□□□ -1.64
ERCC6-213ENST00000624341 ATP5G3P48201 142 aa4.79□□□□□ -1.64
ERCC6-213ENST00000624341 TFF3Q07654 80 aa4.79□□□□□ -1.64
ERCC6-213ENST00000624341 ZNF658BQ4V348 819 aaPredicted RBP4.79□□□□□ -1.64
ERCC6-213ENST00000624341 WDR31Q8NA23 367 aa4.79□□□□□ -1.64
ERCC6-213ENST00000624341 SCARF2Q96GP6 870 aaPredicted RBP4.79□□□□□ -1.64
ERCC6-213ENST00000624341 KCNS1Q96KK3 526 aa4.79□□□□□ -1.64
ERCC6-213ENST00000624341 PRDM14Q9GZV8 571 aa4.79□□□□□ -1.64
ERCC6-213ENST00000624341 DUSP15Q9H1R2 295 aaPredicted RBP4.79□□□□□ -1.64
ERCC6-213ENST00000624341 CALYQ9NYX4 217 aa4.79□□□□□ -1.64
ERCC6-213ENST00000624341 TBL2Q9Y4P3 447 aaKnown RBP4.79□□□□□ -1.64
ERCC6-213ENST00000624341 MPDZO75970 2070 aa4.79□□□□□ -1.64
ERCC6-213ENST00000624341 PPIAL4EA0A075B759 164 aa4.79□□□□□ -1.64
ERCC6-213ENST00000624341 CGB1A6NKQ9 187 aa4.79□□□□□ -1.64
ERCC6-213ENST00000624341 C21orf140B9A014 251 aa4.79□□□□□ -1.64
ERCC6-213ENST00000624341 PPIAL4DF5H284 164 aa4.79□□□□□ -1.64
ERCC6-213ENST00000624341 F8VVB4 439 aa4.79□□□□□ -1.64
ERCC6-213ENST00000624341 F8VWA3 439 aa4.79□□□□□ -1.64
ERCC6-213ENST00000624341 M0R3E3 92 aa4.79□□□□□ -1.64
ERCC6-213ENST00000624341 SLC25A17O43808 307 aa4.79□□□□□ -1.64
ERCC6-213ENST00000624341 VENTXO95231 258 aa4.79□□□□□ -1.64
ERCC6-213ENST00000624341 TIAF1O95411 115 aa4.79□□□□□ -1.64
ERCC6-213ENST00000624341 CD3EP07766 207 aa4.79□□□□□ -1.64
ERCC6-213ENST00000624341 PPIAL4FP0DN26 164 aa4.79□□□□□ -1.64
ERCC6-213ENST00000624341 FAM214BQ7L5A3 538 aa4.79□□□□□ -1.64
ERCC6-213ENST00000624341 FAM19A2Q8N3H0 131 aa4.79□□□□□ -1.64
ERCC6-213ENST00000624341 ZNF837Q96EG3 531 aaPredicted RBP4.79□□□□□ -1.64
ERCC6-213ENST00000624341 WDYHV1Q96HA8 205 aa4.79□□□□□ -1.64
ERCC6-213ENST00000624341 SCNM1Q9BWG6 230 aa4.79□□□□□ -1.64
ERCC6-213ENST00000624341 NPCDR1Q9BY65 106 aa4.79□□□□□ -1.64
ERCC6-213ENST00000624341 ZNF430Q9H8G1 570 aaPredicted RBP4.79□□□□□ -1.64
ERCC6-213ENST00000624341 PPIAL4AQ9Y536 164 aa4.79□□□□□ -1.64
ERCC6-213ENST00000624341 AUP1Q9Y679 476 aa4.79□□□□□ -1.64
ERCC6-213ENST00000624341 TET1Q8NFU7 2136 aa4.79□□□□□ -1.64
ERCC6-213ENST00000624341 WNK2Q9Y3S1 2297 aa4.79□□□□□ -1.64
ERCC6-213ENST00000624341 LOC390937A0A1W2PQ73 354 aa4.79□□□□□ -1.64
ERCC6-213ENST00000624341 ZNF815PA8K554 130 aa4.79□□□□□ -1.64
ERCC6-213ENST00000624341 COLCA2A8K830 154 aa4.79□□□□□ -1.64
ERCC6-213ENST00000624341 H7C2G1 150 aa4.79□□□□□ -1.64
ERCC6-213ENST00000624341 REG1AP05451 166 aa4.79□□□□□ -1.64
ERCC6-213ENST00000624341 ERVFRD-1P60508 538 aa4.79□□□□□ -1.64
ERCC6-213ENST00000624341 LCN2P80188 198 aa4.79□□□□□ -1.64
ERCC6-213ENST00000624341 ECSCRQ19T08 205 aa4.79□□□□□ -1.64
ERCC6-213ENST00000624341 SLC25A53Q5H9E4 307 aa4.79□□□□□ -1.64
ERCC6-213ENST00000624341 C10orf128Q5T292 105 aa4.79□□□□□ -1.64
ERCC6-213ENST00000624341 ERASQ7Z444 233 aa4.79□□□□□ -1.64
ERCC6-213ENST00000624341 SAXO1Q8IYX7 474 aa4.79□□□□□ -1.64
ERCC6-213ENST00000624341 OR8G5Q8NG78 346 aa4.79□□□□□ -1.64
ERCC6-213ENST00000624341 OPN3Q9H1Y3 402 aaPredicted RBP4.79□□□□□ -1.64
ERCC6-213ENST00000624341 AKIRIN1Q9H9L7 192 aaPredicted RBP4.79□□□□□ -1.64
ERCC6-213ENST00000624341 ABCA7Q8IZY2 2146 aa4.78□□□□□ -1.64
ERCC6-213ENST00000624341 A0A087WWC5 75 aa4.78□□□□□ -1.64
ERCC6-213ENST00000624341 WNT9BO14905 357 aa4.78□□□□□ -1.64
ERCC6-213ENST00000624341 LYPD3O95274 346 aa4.78□□□□□ -1.64
ERCC6-213ENST00000624341 CGAP01215 116 aa4.78□□□□□ -1.64
ERCC6-213ENST00000624341 AREGP15514 252 aa4.78□□□□□ -1.64
ERCC6-213ENST00000624341 ICAM4Q14773 271 aa4.78□□□□□ -1.64
ERCC6-213ENST00000624341 GFI1BQ5VTD9 330 aa4.78□□□□□ -1.64
ERCC6-213ENST00000624341 PAQR4Q8N4S7 273 aaPredicted RBP4.78□□□□□ -1.64
ERCC6-213ENST00000624341 KLF14Q8TD94 323 aaPredicted RBP4.78□□□□□ -1.64
ERCC6-213ENST00000624341 ZCCHC14Q8WYQ9 949 aaKnown RBP4.78□□□□□ -1.64
ERCC6-213ENST00000624341 NPIPB3Q92617 1050 aa4.78□□□□□ -1.64
ERCC6-213ENST00000624341 ZNF714Q96N38 554 aa4.78□□□□□ -1.64
ERCC6-213ENST00000624341 REG4Q9BYZ8 158 aa4.78□□□□□ -1.64
ERCC6-213ENST00000624341 SCO2A0A1W2PP80 73 aa4.78□□□□□ -1.64
ERCC6-213ENST00000624341 STAG3L2P0CL84 134 aa4.78□□□□□ -1.64
ERCC6-213ENST00000624341 PRR33A8MZF0 331 aa4.78□□□□□ -1.64
ERCC6-213ENST00000624341 UBE2CO00762 179 aa4.78□□□□□ -1.64
ERCC6-213ENST00000624341 TNFSF10P50591 281 aa4.78□□□□□ -1.64
ERCC6-213ENST00000624341 RPL23P62829 140 aaKnown RBP4.78□□□□□ -1.64
ERCC6-213ENST00000624341 P2RY6Q15077 328 aa4.78□□□□□ -1.64
ERCC6-213ENST00000624341 C2orf83Q53S99 150 aa4.78□□□□□ -1.64
ERCC6-213ENST00000624341 TCF23Q7RTU1 214 aa4.78□□□□□ -1.64
ERCC6-213ENST00000624341 WFDC3Q8IUB2 231 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms