RNA–Protein interactions for RNA: ENST00000623253.4

CD99-211, Transcript of CD99 molecule (Xg blood group), humanhuman

TSL 1 (best)

Gene CD99, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD99-211ENST00000623253 ST6GALNAC5Q9BVH7 336 aa12.16□□□□□ -0.46
CD99-211ENST00000623253 KRTAP17-1Q9BYP8 105 aa12.16□□□□□ -0.46
CD99-211ENST00000623253 TXNL4BQ9NX01 149 aaKnown RBP12.16□□□□□ -0.46
CD99-211ENST00000623253 DPPA5A6NC42 116 aa12.15□□□□□ -0.46
CD99-211ENST00000623253 HMX3A6NHT5 357 aa12.15□□□□□ -0.46
CD99-211ENST00000623253 FCGR3BO75015 233 aa12.15□□□□□ -0.46
CD99-211ENST00000623253 SCGNO76038 276 aa12.15□□□□□ -0.46
CD99-211ENST00000623253 SAA1P0DJI8 122 aaPredicted RBP12.15□□□□□ -0.46
CD99-211ENST00000623253 CBLN1P23435 193 aa12.15□□□□□ -0.46
CD99-211ENST00000623253 CDK10Q15131 360 aa12.15□□□□□ -0.46
CD99-211ENST00000623253 CDNFQ49AH0 187 aa12.15□□□□□ -0.46
CD99-211ENST00000623253 FAM209BQ5JX69 171 aa12.15□□□□□ -0.46
CD99-211ENST00000623253 HACD4Q5VWC8 232 aa12.15□□□□□ -0.46
CD99-211ENST00000623253 SLC25A42Q86VD7 318 aa12.15□□□□□ -0.46
CD99-211ENST00000623253 MMD2Q8IY49 270 aa12.15□□□□□ -0.46
CD99-211ENST00000623253 OVOL2Q9BRP0 275 aa12.15□□□□□ -0.46
CD99-211ENST00000623253 GGTLC1Q9BX51 225 aa12.15□□□□□ -0.46
CD99-211ENST00000623253 YTHDF1Q9BYJ9 559 aaKnown RBP12.15□□□□□ -0.46
CD99-211ENST00000623253 FBXL7Q9UJT9 491 aa12.15□□□□□ -0.46
CD99-211ENST00000623253 SSR3Q9UNL2 185 aa12.15□□□□□ -0.46
CD99-211ENST00000623253 S4R3C0 116 aa12.15□□□□□ -0.46
CD99-211ENST00000623253 ALMS1Q8TCU4 4167 aa12.14□□□□□ -0.47
CD99-211ENST00000623253 IGKV1D-8A0A087WSZ0 117 aa12.14□□□□□ -0.47
CD99-211ENST00000623253 LOC102724200A0A096LPH7 203 aaPredicted RBP12.14□□□□□ -0.47
CD99-211ENST00000623253 SCAF4O95104 1147 aaKnown RBP12.14□□□□□ -0.47
CD99-211ENST00000623253 CTXN2P0C2S0 81 aa12.14□□□□□ -0.47
CD99-211ENST00000623253 OR2B11Q5JQS5 317 aa12.14□□□□□ -0.47
CD99-211ENST00000623253 ZNF57Q68EA5 555 aaPredicted RBP12.14□□□□□ -0.47
CD99-211ENST00000623253 CLEC19AQ6UXS0 136 aa12.14□□□□□ -0.47
CD99-211ENST00000623253 C19orf35Q6ZS72 473 aa12.14□□□□□ -0.47
CD99-211ENST00000623253 TMEM61Q8N0U2 210 aa12.14□□□□□ -0.47
CD99-211ENST00000623253 FYTTD1Q96QD9 318 aaKnown RBP12.14□□□□□ -0.47
CD99-211ENST00000623253 DCSTAMPQ9H295 470 aa12.14□□□□□ -0.47
CD99-211ENST00000623253 ELF5Q9UKW6 265 aaPredicted RBP12.14□□□□□ -0.47
CD99-211ENST00000623253 DMRT1Q9Y5R6 373 aa12.14□□□□□ -0.47
CD99-211ENST00000623253 LGALS9O00182 355 aa12.13□□□□□ -0.47
CD99-211ENST00000623253 ARL3P36405 182 aa12.13□□□□□ -0.47
CD99-211ENST00000623253 GPHB5Q86YW7 130 aa12.13□□□□□ -0.47
CD99-211ENST00000623253 VKORC1L1Q8N0U8 176 aa12.13□□□□□ -0.47
CD99-211ENST00000623253 UXS1Q8NBZ7 420 aa12.13□□□□□ -0.47
CD99-211ENST00000623253 DAPK2Q9UIK4 370 aa12.13□□□□□ -0.47
CD99-211ENST00000623253 ZNF257Q9Y2Q1 563 aa12.13□□□□□ -0.47
CD99-211ENST00000623253 TMEM235A6NFC5 223 aa12.12□□□□□ -0.47
CD99-211ENST00000623253 SLC22A5O76082 557 aa12.12□□□□□ -0.47
CD99-211ENST00000623253 NDUFB8O95169 186 aa12.12□□□□□ -0.47
CD99-211ENST00000623253 GNG2P59768 71 aa12.12□□□□□ -0.47
CD99-211ENST00000623253 FAM106AQ4KMX7 169 aa12.12□□□□□ -0.47
CD99-211ENST00000623253 SFXN4Q6P4A7 337 aa12.12□□□□□ -0.47
CD99-211ENST00000623253 ZNF773Q6PK81 442 aa12.12□□□□□ -0.47
CD99-211ENST00000623253 ZNF645Q8N7E2 425 aa12.12□□□□□ -0.47
CD99-211ENST00000623253 OR51E2Q9H255 320 aa12.12□□□□□ -0.47
CD99-211ENST00000623253 MLXQ9UH92 298 aa12.12□□□□□ -0.47
CD99-211ENST00000623253 RRP15Q9Y3B9 282 aaKnown RBP12.12□□□□□ -0.47
CD99-211ENST00000623253 OR2W1Q9Y3N9 320 aa12.12□□□□□ -0.47
CD99-211ENST00000623253 A0A0J9YWU9 116 aa12.11□□□□□ -0.47
CD99-211ENST00000623253 NUPR2A6NF83 97 aa12.11□□□□□ -0.47
CD99-211ENST00000623253 CD36P16671 472 aa12.11□□□□□ -0.47
CD99-211ENST00000623253 NFYAP23511 347 aaPredicted RBP12.11□□□□□ -0.47
CD99-211ENST00000623253 ANKRD55Q3KP44 614 aa12.11□□□□□ -0.47
CD99-211ENST00000623253 TM4SF20Q53R12 229 aa12.11□□□□□ -0.47
CD99-211ENST00000623253 CNIH2Q6PI25 160 aa12.11□□□□□ -0.47
CD99-211ENST00000623253 KCTD9Q7L273 389 aa12.11□□□□□ -0.47
CD99-211ENST00000623253 LGALS14Q8TCE9 139 aa12.11□□□□□ -0.47
CD99-211ENST00000623253 NUDCD2Q8WVJ2 157 aa12.11□□□□□ -0.47
CD99-211ENST00000623253 MRPS7Q9Y2R9 242 aaKnown RBP12.11□□□□□ -0.47
CD99-211ENST00000623253 PRELID3BQ9Y3B1 194 aa12.11□□□□□ -0.47
CD99-211ENST00000623253 TMEM213A2RRL7 107 aa12.1□□□□□ -0.47
CD99-211ENST00000623253 TEX22C9J3V5 150 aa12.1□□□□□ -0.47
CD99-211ENST00000623253 HLA-DQB1P01920 261 aa12.1□□□□□ -0.47
CD99-211ENST00000623253 SDC2P34741 201 aa12.1□□□□□ -0.47
CD99-211ENST00000623253 RPL27AP46776 148 aaKnown RBP12.1□□□□□ -0.47
CD99-211ENST00000623253 SCAND1P57086 179 aa12.1□□□□□ -0.47
CD99-211ENST00000623253 BTNL8Q6UX41 500 aa12.1□□□□□ -0.47
CD99-211ENST00000623253 RBPMS2Q6ZRY4 209 aaKnown RBP12.1□□□□□ -0.47
CD99-211ENST00000623253 EEF1AKMT3Q96AZ1 226 aa12.1□□□□□ -0.47
CD99-211ENST00000623253 CCDC140Q96MF4 163 aa12.1□□□□□ -0.47
CD99-211ENST00000623253 RHBDL2Q9NX52 303 aa12.1□□□□□ -0.47
CD99-211ENST00000623253 RBMX2Q9Y388 322 aaKnown RBP12.1□□□□□ -0.47
CD99-211ENST00000623253 NPIPB5A8MRT5 1133 aa12.09□□□□□ -0.47
CD99-211ENST00000623253 E7EUB6 86 aa12.09□□□□□ -0.47
CD99-211ENST00000623253 DHFRP00374 187 aa12.09□□□□□ -0.47
CD99-211ENST00000623253 IL6RP08887 468 aaPredicted RBP12.09□□□□□ -0.47
CD99-211ENST00000623253 AREGP15514 252 aa12.09□□□□□ -0.47
CD99-211ENST00000623253 RPL30P62888 115 aaKnown RBP12.09□□□□□ -0.47
CD99-211ENST00000623253 EWSR1Q01844 656 aaKnown RBP eCLIP12.09□□□□□ -0.47
CD99-211ENST00000623253 OR4A47Q6IF82 309 aa12.09□□□□□ -0.47
CD99-211ENST00000623253 CEMP1Q6PRD7 247 aaPredicted RBP12.09□□□□□ -0.47
CD99-211ENST00000623253 LYG2Q86SG7 212 aa12.09□□□□□ -0.47
CD99-211ENST00000623253 VSTM2AQ8TAG5 236 aa12.09□□□□□ -0.47
CD99-211ENST00000623253 OR2A7Q96R45 310 aa12.09□□□□□ -0.47
CD99-211ENST00000623253 HSD17B10Q99714 261 aaKnown RBP12.09□□□□□ -0.47
CD99-211ENST00000623253 ANXA10Q9UJ72 324 aa12.09□□□□□ -0.47
CD99-211ENST00000623253 ETV7Q9Y603 341 aa12.09□□□□□ -0.47
CD99-211ENST00000623253 IGKV1D-13A0A0B4J2D9 117 aa12.08□□□□□ -0.48
CD99-211ENST00000623253 LOC100506127A0A0U1RQW1 187 aa12.08□□□□□ -0.48
CD99-211ENST00000623253 SPRY2O43597 315 aa12.08□□□□□ -0.48
CD99-211ENST00000623253 SSX5O60225 188 aa12.08□□□□□ -0.48
CD99-211ENST00000623253 KBTBD11O94819 623 aa12.08□□□□□ -0.48
CD99-211ENST00000623253 IGLV2-14P01704 120 aa12.08□□□□□ -0.48
CD99-211ENST00000623253 REG1AP05451 166 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms