RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 BMPR1BO00238 502 aa7.5□□□□□ -1.21
HDAC9-229ENST00000622668 HOXA3O43365 443 aaPredicted RBP7.5□□□□□ -1.21
HDAC9-229ENST00000622668 H2AFB1P0C5Y9 115 aa7.5□□□□□ -1.21
HDAC9-229ENST00000622668 CFHR2P36980 270 aa7.5□□□□□ -1.21
HDAC9-229ENST00000622668 HABP2Q14520 560 aaPredicted RBP7.5□□□□□ -1.21
HDAC9-229ENST00000622668 HLA-DRB5Q30154 266 aa7.5□□□□□ -1.21
HDAC9-229ENST00000622668 ZNF529Q6P280 563 aa7.5□□□□□ -1.21
HDAC9-229ENST00000622668 ALKAL2Q6UX46 152 aa7.5□□□□□ -1.21
HDAC9-229ENST00000622668 TCTEX1D1Q8N7M0 179 aa7.5□□□□□ -1.21
HDAC9-229ENST00000622668 C16orf92Q96LL3 132 aa7.5□□□□□ -1.21
HDAC9-229ENST00000622668 CHD9Q3L8U1 2897 aa7.5□□□□□ -1.21
HDAC9-229ENST00000622668 FAM181BA6NEQ2 426 aa7.5□□□□□ -1.21
HDAC9-229ENST00000622668 I3L521 148 aa7.5□□□□□ -1.21
HDAC9-229ENST00000622668 B3GALNT1O75752 331 aa7.5□□□□□ -1.21
HDAC9-229ENST00000622668 RD3LP0DJH9 198 aa7.5□□□□□ -1.21
HDAC9-229ENST00000622668 NPPCP23582 126 aa7.5□□□□□ -1.21
HDAC9-229ENST00000622668 HIST1H3AP68431 136 aa7.5□□□□□ -1.21
HDAC9-229ENST00000622668 PLAC9Q5JTB6 97 aa7.5□□□□□ -1.21
HDAC9-229ENST00000622668 FAM120AOSQ5T036 256 aa7.5□□□□□ -1.21
HDAC9-229ENST00000622668 TPTE2P1Q5T6R2 138 aa7.5□□□□□ -1.21
HDAC9-229ENST00000622668 HIST2H3PS2Q5TEC6 136 aa7.5□□□□□ -1.21
HDAC9-229ENST00000622668 HIST2H3AQ71DI3 136 aa7.5□□□□□ -1.21
HDAC9-229ENST00000622668 C16orf82Q7Z2V1 217 aa7.5□□□□□ -1.21
HDAC9-229ENST00000622668 SRSF12Q8WXF0 261 aaKnown RBP7.5□□□□□ -1.21
HDAC9-229ENST00000622668 DEDD2Q8WXF8 326 aa7.5□□□□□ -1.21
HDAC9-229ENST00000622668 SLC25A38Q96DW6 304 aa7.5□□□□□ -1.21
HDAC9-229ENST00000622668 WDR89Q96FK6 387 aaPredicted RBP7.5□□□□□ -1.21
HDAC9-229ENST00000622668 IGKV1-27A0A075B6S5 117 aa7.5□□□□□ -1.21
HDAC9-229ENST00000622668 INAFM1C9JVW0 142 aa7.5□□□□□ -1.21
HDAC9-229ENST00000622668 ALX3O95076 343 aa7.5□□□□□ -1.21
HDAC9-229ENST00000622668 HLA-DQB1P01920 261 aa7.5□□□□□ -1.21
HDAC9-229ENST00000622668 HLA-GP17693 338 aa7.5□□□□□ -1.21
HDAC9-229ENST00000622668 TMEM50BP56557 158 aa7.5□□□□□ -1.21
HDAC9-229ENST00000622668 FFAR4Q5NUL3 377 aa7.5□□□□□ -1.21
HDAC9-229ENST00000622668 FAM78BQ5VT40 261 aa7.5□□□□□ -1.21
HDAC9-229ENST00000622668 LCNL1Q6ZST4 164 aa7.5□□□□□ -1.21
HDAC9-229ENST00000622668 LHFPL4Q7Z7J7 247 aa7.5□□□□□ -1.21
HDAC9-229ENST00000622668 OR4D10Q8NGI6 311 aa7.5□□□□□ -1.21
HDAC9-229ENST00000622668 TNFRSF14Q92956 283 aa7.5□□□□□ -1.21
HDAC9-229ENST00000622668 TCF19Q9Y242 345 aa7.5□□□□□ -1.21
HDAC9-229ENST00000622668 YPEL1O60688 119 aa7.49□□□□□ -1.21
HDAC9-229ENST00000622668 CA2P00918 260 aa7.49□□□□□ -1.21
HDAC9-229ENST00000622668 UBE2E1P51965 193 aa7.49□□□□□ -1.21
HDAC9-229ENST00000622668 SPCS3P61009 180 aa7.49□□□□□ -1.21
HDAC9-229ENST00000622668 UBE2KP61086 200 aa7.49□□□□□ -1.21
HDAC9-229ENST00000622668 ZNF818PQ6ZRF7 136 aa7.49□□□□□ -1.21
HDAC9-229ENST00000622668 YPEL2Q96QA6 119 aa7.49□□□□□ -1.21
HDAC9-229ENST00000622668 SETXQ7Z333 2677 aaKnown RBP7.49□□□□□ -1.21
HDAC9-229ENST00000622668 IGHV3-66A0A0C4DH42 116 aa7.49□□□□□ -1.21
HDAC9-229ENST00000622668 JTBO76095 146 aa7.49□□□□□ -1.21
HDAC9-229ENST00000622668 MBP02144 154 aa7.49□□□□□ -1.21
HDAC9-229ENST00000622668 S100A11P31949 105 aa7.49□□□□□ -1.21
HDAC9-229ENST00000622668 DUX4L9Q6RFH8 374 aaPredicted RBP7.49□□□□□ -1.21
HDAC9-229ENST00000622668 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.49□□□□□ -1.21
HDAC9-229ENST00000622668 RNF138Q8WVD3 245 aa7.49□□□□□ -1.21
HDAC9-229ENST00000622668 MED9Q9NWA0 146 aa7.49□□□□□ -1.21
HDAC9-229ENST00000622668 RCC2Q9P258 522 aaKnown RBP7.49□□□□□ -1.21
HDAC9-229ENST00000622668 OPN4Q9UHM6 478 aa7.49□□□□□ -1.21
HDAC9-229ENST00000622668 MMP24Q9Y5R2 645 aa7.49□□□□□ -1.21
HDAC9-229ENST00000622668 KIAA1549LQ6ZVL6 1849 aa7.49□□□□□ -1.21
HDAC9-229ENST00000622668 TRAV41A0A0B4J266 112 aa7.49□□□□□ -1.21
HDAC9-229ENST00000622668 CGB1A6NKQ9 187 aa7.49□□□□□ -1.21
HDAC9-229ENST00000622668 IGHV2-5P01817 119 aa7.49□□□□□ -1.21
HDAC9-229ENST00000622668 SLC25A5P05141 298 aaKnown RBP7.49□□□□□ -1.21
HDAC9-229ENST00000622668 FCGR2BP31994 310 aaPredicted RBP7.49□□□□□ -1.21
HDAC9-229ENST00000622668 ZP1P60852 638 aa7.49□□□□□ -1.21
HDAC9-229ENST00000622668 UBE2L3P68036 154 aaKnown RBP7.49□□□□□ -1.21
HDAC9-229ENST00000622668 RELQ04864 619 aaPredicted RBP7.49□□□□□ -1.21
HDAC9-229ENST00000622668 HSD17B13Q7Z5P4 300 aaPredicted RBP7.49□□□□□ -1.21
HDAC9-229ENST00000622668 C21orf62Q9NYP8 219 aa7.49□□□□□ -1.21
HDAC9-229ENST00000622668 PEMTQ9UBM1 199 aa7.49□□□□□ -1.21
HDAC9-229ENST00000622668 C17orf98A8MV24 154 aa7.49□□□□□ -1.21
HDAC9-229ENST00000622668 HIST1H1BP16401 226 aaKnown RBP7.49□□□□□ -1.21
HDAC9-229ENST00000622668 COMPP49747 757 aaPredicted RBP7.49□□□□□ -1.21
HDAC9-229ENST00000622668 RHOGP84095 191 aa7.49□□□□□ -1.21
HDAC9-229ENST00000622668 TIGITQ495A1 244 aa7.49□□□□□ -1.21
HDAC9-229ENST00000622668 VAX1Q5SQQ9 334 aa7.49□□□□□ -1.21
HDAC9-229ENST00000622668 BTNL8Q6UX41 500 aa7.49□□□□□ -1.21
HDAC9-229ENST00000622668 ZNF497Q6ZNH5 498 aa7.49□□□□□ -1.21
HDAC9-229ENST00000622668 LINC00299Q6ZSB3 139 aa7.49□□□□□ -1.21
HDAC9-229ENST00000622668 TMED6Q8WW62 240 aa7.49□□□□□ -1.21
HDAC9-229ENST00000622668 TMEM158Q8WZ71 300 aa7.49□□□□□ -1.21
HDAC9-229ENST00000622668 GNG13Q9P2W3 67 aa7.49□□□□□ -1.21
HDAC9-229ENST00000622668 A0A0A6YYJ9 748 aa7.48□□□□□ -1.21
HDAC9-229ENST00000622668 A0A1B0GU03 582 aa7.48□□□□□ -1.21
HDAC9-229ENST00000622668 OOSP1A8MZH6 123 aa7.48□□□□□ -1.21
HDAC9-229ENST00000622668 H0Y980 276 aa7.48□□□□□ -1.21
HDAC9-229ENST00000622668 S100A6P06703 90 aa7.48□□□□□ -1.21
HDAC9-229ENST00000622668 SRSF7Q16629 238 aaKnown RBP eCLIP7.48□□□□□ -1.21
HDAC9-229ENST00000622668 TEX38Q6PEX7 206 aa7.48□□□□□ -1.21
HDAC9-229ENST00000622668 C1orf122Q6ZSJ8 110 aa7.48□□□□□ -1.21
HDAC9-229ENST00000622668 FRZBQ92765 325 aa7.48□□□□□ -1.21
HDAC9-229ENST00000622668 TM2D1Q9BX74 207 aa7.48□□□□□ -1.21
HDAC9-229ENST00000622668 MIXL1Q9H2W2 232 aa7.48□□□□□ -1.21
HDAC9-229ENST00000622668 SLA2Q9H6Q3 261 aa7.48□□□□□ -1.21
HDAC9-229ENST00000622668 SLC2A8Q9NY64 477 aa7.48□□□□□ -1.21
HDAC9-229ENST00000622668 TBL2Q9Y4P3 447 aaKnown RBP7.48□□□□□ -1.21
HDAC9-229ENST00000622668 SELENOKQ9Y6D0 94 aa7.48□□□□□ -1.21
HDAC9-229ENST00000622668 U3KQ87 197 aa7.48□□□□□ -1.21
HDAC9-229ENST00000622668 IGHV1-3A0A0C4DH29 117 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms