RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 DGAT2L7PQ6IED9 249 aa7.79□□□□□ -1.16
GGA3-223ENST00000621870 C11orf44Q8N8P7 122 aa7.79□□□□□ -1.16
GGA3-223ENST00000621870 C5orf17Q8NAS9 161 aa7.79□□□□□ -1.16
GGA3-223ENST00000621870 ST6GALNAC3Q8NDV1 305 aa7.79□□□□□ -1.16
GGA3-223ENST00000621870 RBKSQ9H477 322 aa7.79□□□□□ -1.16
GGA3-223ENST00000621870 SRD5A3Q9H8P0 318 aa7.79□□□□□ -1.16
GGA3-223ENST00000621870 CLDN16Q9Y5I7 305 aa7.79□□□□□ -1.16
GGA3-223ENST00000621870 PXMP4Q9Y6I8 212 aa7.79□□□□□ -1.16
GGA3-223ENST00000621870 POLQO75417 2590 aa7.78□□□□□ -1.16
GGA3-223ENST00000621870 LOC102723971A0A1B0GUV8 181 aa7.78□□□□□ -1.16
GGA3-223ENST00000621870 C7orf66A4D0T2 115 aa7.78□□□□□ -1.16
GGA3-223ENST00000621870 LINC00862A6NCI5 91 aa7.78□□□□□ -1.16
GGA3-223ENST00000621870 MBD3L4A6NDZ8 208 aaPredicted RBP7.78□□□□□ -1.16
GGA3-223ENST00000621870 MBD3L3A6NE82 208 aaPredicted RBP7.78□□□□□ -1.16
GGA3-223ENST00000621870 MBD3L5A6NJ08 208 aaPredicted RBP7.78□□□□□ -1.16
GGA3-223ENST00000621870 NPIPB11E5RHQ5 1161 aa7.78□□□□□ -1.16
GGA3-223ENST00000621870 PTBP3O95758 552 aaKnown RBP7.78□□□□□ -1.16
GGA3-223ENST00000621870 RAB5AP20339 215 aa7.78□□□□□ -1.16
GGA3-223ENST00000621870 RPL30P62888 115 aaKnown RBP7.78□□□□□ -1.16
GGA3-223ENST00000621870 ZNF474Q6S9Z5 364 aaPredicted RBP7.78□□□□□ -1.16
GGA3-223ENST00000621870 MBD3L2Q8NHZ7 208 aaPredicted RBP7.78□□□□□ -1.16
GGA3-223ENST00000621870 NPIPB3Q92617 1050 aa7.78□□□□□ -1.16
GGA3-223ENST00000621870 C16orf92Q96LL3 132 aa7.78□□□□□ -1.16
GGA3-223ENST00000621870 C5orf42Q9H799 3197 aa7.78□□□□□ -1.16
GGA3-223ENST00000621870 IGHV3OR16-8A0A075B7F1 116 aa7.78□□□□□ -1.16
GGA3-223ENST00000621870 RBFOX3A6NFN3 312 aa7.78□□□□□ -1.16
GGA3-223ENST00000621870 C1QL1O75973 258 aa7.78□□□□□ -1.16
GGA3-223ENST00000621870 F12P00748 615 aaPredicted RBP7.78□□□□□ -1.16
GGA3-223ENST00000621870 MBPP02686 304 aaPredicted RBP7.78□□□□□ -1.16
GGA3-223ENST00000621870 GAS1P54826 345 aa7.78□□□□□ -1.16
GGA3-223ENST00000621870 TM4SF20Q53R12 229 aa7.78□□□□□ -1.16
GGA3-223ENST00000621870 PIP4P1Q86T03 277 aa7.78□□□□□ -1.16
GGA3-223ENST00000621870 METTL26Q96S19 204 aa7.78□□□□□ -1.16
GGA3-223ENST00000621870 FAM103A1Q9BTL3 118 aaKnown RBP7.78□□□□□ -1.16
GGA3-223ENST00000621870 PQLC2LA1A4F0 135 aa7.78□□□□□ -1.16
GGA3-223ENST00000621870 IGHG3P01860 377 aa7.78□□□□□ -1.16
GGA3-223ENST00000621870 TRGV3P03979 118 aa7.78□□□□□ -1.16
GGA3-223ENST00000621870 HOXA4Q00056 320 aaPredicted RBP7.78□□□□□ -1.16
GGA3-223ENST00000621870 TNFRSF9Q07011 255 aa7.78□□□□□ -1.16
GGA3-223ENST00000621870 RPEL1Q2QD12 228 aa7.78□□□□□ -1.16
GGA3-223ENST00000621870 TMEM30BQ3MIR4 351 aa7.78□□□□□ -1.16
GGA3-223ENST00000621870 MIC13Q5XKP0 118 aa7.78□□□□□ -1.16
GGA3-223ENST00000621870 LSM10Q969L4 123 aaKnown RBP7.78□□□□□ -1.16
GGA3-223ENST00000621870 PHYHIPLQ96FC7 376 aa7.78□□□□□ -1.16
GGA3-223ENST00000621870 OR10C1Q96KK4 312 aa7.78□□□□□ -1.16
GGA3-223ENST00000621870 PAXXQ9BUH6 204 aa7.78□□□□□ -1.16
GGA3-223ENST00000621870 NPDC1Q9NQX5 325 aaPredicted RBP7.78□□□□□ -1.16
GGA3-223ENST00000621870 MMP26Q9NRE1 261 aa7.78□□□□□ -1.16
GGA3-223ENST00000621870 SLC25A15Q9Y619 301 aa7.78□□□□□ -1.16
GGA3-223ENST00000621870 LINC00312Q9Y6C7 94 aa7.78□□□□□ -1.16
GGA3-223ENST00000621870 YLPM1P49750 1951 aaKnown RBP7.77□□□□□ -1.16
GGA3-223ENST00000621870 H3BTX0 84 aa7.77□□□□□ -1.17
GGA3-223ENST00000621870 CLDN34H7C241 214 aa7.77□□□□□ -1.17
GGA3-223ENST00000621870 MEF2CQ06413 473 aaPredicted RBP7.77□□□□□ -1.17
GGA3-223ENST00000621870 LRRC75BQ2VPJ9 315 aa7.77□□□□□ -1.17
GGA3-223ENST00000621870 PLPPR1Q8TBJ4 325 aa7.77□□□□□ -1.17
GGA3-223ENST00000621870 LYZL4Q96KX0 146 aa7.77□□□□□ -1.17
GGA3-223ENST00000621870 FREM1Q5H8C1 2179 aa7.77□□□□□ -1.17
GGA3-223ENST00000621870 TRAV40A0A0B4J280 105 aa7.77□□□□□ -1.17
GGA3-223ENST00000621870 CTXND1A0A1B0GTU2 59 aa7.77□□□□□ -1.17
GGA3-223ENST00000621870 A0A1W2PS18 150 aa7.77□□□□□ -1.17
GGA3-223ENST00000621870 ID1P41134 155 aa7.77□□□□□ -1.17
GGA3-223ENST00000621870 FA2HQ7L5A8 372 aa7.77□□□□□ -1.17
GGA3-223ENST00000621870 DUX5Q96PT3 197 aa7.77□□□□□ -1.17
GGA3-223ENST00000621870 TCEAL7Q9BRU2 100 aa7.77□□□□□ -1.17
GGA3-223ENST00000621870 FLNBO75369 2602 aaKnown RBP7.77□□□□□ -1.17
GGA3-223ENST00000621870 BMPR1BO00238 502 aa7.77□□□□□ -1.17
GGA3-223ENST00000621870 TM4SF5O14894 197 aa7.77□□□□□ -1.17
GGA3-223ENST00000621870 HKR1P10072 659 aa7.77□□□□□ -1.17
GGA3-223ENST00000621870 BSXQ3C1V8 233 aa7.77□□□□□ -1.17
GGA3-223ENST00000621870 EBLN2Q6P2I7 272 aa7.77□□□□□ -1.17
GGA3-223ENST00000621870 BPIFA4PQ86YQ2 179 aa7.77□□□□□ -1.17
GGA3-223ENST00000621870 OR5AU1Q8NGC0 362 aa7.77□□□□□ -1.17
GGA3-223ENST00000621870 OR52M1Q8NGK5 317 aa7.77□□□□□ -1.17
GGA3-223ENST00000621870 TP53RKQ96S44 253 aa7.77□□□□□ -1.17
GGA3-223ENST00000621870 TRAF4Q9BUZ4 470 aaPredicted RBP7.77□□□□□ -1.17
GGA3-223ENST00000621870 TOLLIPQ9H0E2 274 aa7.77□□□□□ -1.17
GGA3-223ENST00000621870 PTPRDP23468 1912 aa7.77□□□□□ -1.17
GGA3-223ENST00000621870 ANAPC1Q9H1A4 1944 aa7.77□□□□□ -1.17
GGA3-223ENST00000621870 A0A1W2PRX2 142 aa7.76□□□□□ -1.17
GGA3-223ENST00000621870 DPRXA6NFQ7 191 aa7.76□□□□□ -1.17
GGA3-223ENST00000621870 IGHV3-11P01762 117 aa7.76□□□□□ -1.17
GGA3-223ENST00000621870 CSN3P07498 182 aa7.76□□□□□ -1.17
GGA3-223ENST00000621870 HIST1H1EP10412 219 aaKnown RBP7.76□□□□□ -1.17
GGA3-223ENST00000621870 ZP3P21754 424 aa7.76□□□□□ -1.17
GGA3-223ENST00000621870 B3GALT5-AS1P59052 145 aa7.76□□□□□ -1.17
GGA3-223ENST00000621870 ZNF273Q14593 569 aa7.76□□□□□ -1.17
GGA3-223ENST00000621870 LGALSLQ3ZCW2 172 aaPredicted RBP7.76□□□□□ -1.17
GGA3-223ENST00000621870 LDLRAD3Q86YD5 345 aa7.76□□□□□ -1.17
GGA3-223ENST00000621870 LHFPL5Q8TAF8 219 aa7.76□□□□□ -1.17
GGA3-223ENST00000621870 NEUROG1Q92886 237 aa7.76□□□□□ -1.17
GGA3-223ENST00000621870 NABP1Q96AH0 204 aa7.76□□□□□ -1.17
GGA3-223ENST00000621870 ZNF430Q9H8G1 570 aaPredicted RBP7.76□□□□□ -1.17
GGA3-223ENST00000621870 UNC80Q8N2C7 3258 aa7.76□□□□□ -1.17
GGA3-223ENST00000621870 TMEM8BA6NDV4 472 aa7.76□□□□□ -1.17
GGA3-223ENST00000621870 HELTA6NFD8 242 aa7.76□□□□□ -1.17
GGA3-223ENST00000621870 C17orf98A8MV24 154 aa7.76□□□□□ -1.17
GGA3-223ENST00000621870 ZNF207O43670 478 aaKnown RBP7.76□□□□□ -1.17
GGA3-223ENST00000621870 CRYGSP22914 178 aa7.76□□□□□ -1.17
GGA3-223ENST00000621870 ATP5G2Q06055 141 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms