RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 LY86O95711 162 aa17.38■□□□□ 0.37
SPAST-204ENST00000621856 HOXA1P49639 335 aaPredicted RBP17.38■□□□□ 0.37
SPAST-204ENST00000621856 ARL16Q0P5N6 197 aa17.38■□□□□ 0.37
SPAST-204ENST00000621856 KLRD1Q13241 179 aa17.38■□□□□ 0.37
SPAST-204ENST00000621856 OR8G2PQ6IF36 304 aa17.38■□□□□ 0.37
SPAST-204ENST00000621856 SLC25A24Q6NUK1 477 aa17.38■□□□□ 0.37
SPAST-204ENST00000621856 CLEC2AQ6UVW9 174 aa17.38■□□□□ 0.37
SPAST-204ENST00000621856 MOB3BQ86TA1 216 aa17.38■□□□□ 0.37
SPAST-204ENST00000621856 HAPLN4Q86UW8 402 aa17.38■□□□□ 0.37
SPAST-204ENST00000621856 OR11H6Q8NGC7 330 aa17.38■□□□□ 0.37
SPAST-204ENST00000621856 MS4A7Q9GZW8 240 aaPredicted RBP17.38■□□□□ 0.37
SPAST-204ENST00000621856 TMEM14BQ9NUH8 114 aa17.38■□□□□ 0.37
SPAST-204ENST00000621856 BET1LQ9NYM9 111 aa17.38■□□□□ 0.37
SPAST-204ENST00000621856 OR51B2Q9Y5P1 312 aa17.38■□□□□ 0.37
SPAST-204ENST00000621856 IGHV3-72A0A0B4J1Y9 119 aa17.37■□□□□ 0.37
SPAST-204ENST00000621856 IFNA5P01569 189 aa17.37■□□□□ 0.37
SPAST-204ENST00000621856 SEC11BP0C7V7 166 aa17.37■□□□□ 0.37
SPAST-204ENST00000621856 PDLIM3Q53GG5 364 aaPredicted RBP17.37■□□□□ 0.37
SPAST-204ENST00000621856 C1orf122Q6ZSJ8 110 aa17.37■□□□□ 0.37
SPAST-204ENST00000621856 STPG2Q8N412 459 aa17.37■□□□□ 0.37
SPAST-204ENST00000621856 SH3BGRL3Q9H299 93 aa17.37■□□□□ 0.37
SPAST-204ENST00000621856 HIPK2Q9H2X6 1198 aa17.37■□□□□ 0.37
SPAST-204ENST00000621856 HEYLQ9NQ87 328 aaPredicted RBP17.37■□□□□ 0.37
SPAST-204ENST00000621856 KPTNQ9Y664 436 aa17.37■□□□□ 0.37
SPAST-204ENST00000621856 IGHV1-3A0A0C4DH29 117 aa17.36■□□□□ 0.37
SPAST-204ENST00000621856 IGHV2-70DA0A0C4DH43 119 aa17.36■□□□□ 0.37
SPAST-204ENST00000621856 ZNF705EA8MWA4 302 aaPredicted RBP17.36■□□□□ 0.37
SPAST-204ENST00000621856 IL6RP08887 468 aaPredicted RBP17.36■□□□□ 0.37
SPAST-204ENST00000621856 FAM157CP0CG43 387 aa17.36■□□□□ 0.37
SPAST-204ENST00000621856 SPP1P10451 314 aa17.36■□□□□ 0.37
SPAST-204ENST00000621856 SULT1A2P50226 295 aa17.36■□□□□ 0.37
SPAST-204ENST00000621856 HSPE1P61604 102 aaKnown RBP17.36■□□□□ 0.37
SPAST-204ENST00000621856 SLC38A11Q08AI6 406 aa17.36■□□□□ 0.37
SPAST-204ENST00000621856 VMO1Q7Z5L0 202 aa17.36■□□□□ 0.37
SPAST-204ENST00000621856 PUSL1Q8N0Z8 303 aaKnown RBP17.36■□□□□ 0.37
SPAST-204ENST00000621856 C10orf105Q8TEF2 133 aa17.36■□□□□ 0.37
SPAST-204ENST00000621856 MARVELD3Q96A59 401 aa17.36■□□□□ 0.37
SPAST-204ENST00000621856 ENY2Q9NPA8 101 aa17.36■□□□□ 0.37
SPAST-204ENST00000621856 MED9Q9NWA0 146 aa17.36■□□□□ 0.37
SPAST-204ENST00000621856 COL12A1Q99715 3063 aa17.36■□□□□ 0.37
SPAST-204ENST00000621856 TEX46H3BTG2 121 aa17.35■□□□□ 0.37
SPAST-204ENST00000621856 NDUFS8O00217 210 aa17.35■□□□□ 0.37
SPAST-204ENST00000621856 FOXH1O75593 365 aa17.35■□□□□ 0.37
SPAST-204ENST00000621856 KBTBD11O94819 623 aa17.35■□□□□ 0.37
SPAST-204ENST00000621856 FGF2P09038 288 aa17.35■□□□□ 0.37
SPAST-204ENST00000621856 HTR1DP28221 377 aa17.35■□□□□ 0.37
SPAST-204ENST00000621856 RPP30P78346 268 aaKnown RBP17.35■□□□□ 0.37
SPAST-204ENST00000621856 PERPQ96FX8 193 aa17.35■□□□□ 0.37
SPAST-204ENST00000621856 ATP6V0CP27449 155 aa17.35■□□□□ 0.37
SPAST-204ENST00000621856 VDAC2P45880 294 aaPredicted RBP17.35■□□□□ 0.37
SPAST-204ENST00000621856 TPTE2P1Q5T6R2 138 aa17.35■□□□□ 0.37
SPAST-204ENST00000621856 VSTM2AQ8TAG5 236 aa17.35■□□□□ 0.37
SPAST-204ENST00000621856 NRGNQ92686 78 aa17.35■□□□□ 0.37
SPAST-204ENST00000621856 HINT2Q9BX68 163 aa17.35■□□□□ 0.37
SPAST-204ENST00000621856 FKBP11Q9NYL4 201 aa17.35■□□□□ 0.37
SPAST-204ENST00000621856 LY6LH3BQJ8 138 aa17.34■□□□□ 0.37
SPAST-204ENST00000621856 IFNA10P01566 189 aa17.34■□□□□ 0.37
SPAST-204ENST00000621856 MYOD1P15172 320 aa17.34■□□□□ 0.37
SPAST-204ENST00000621856 PAX2Q02962 417 aa17.34■□□□□ 0.37
SPAST-204ENST00000621856 VMA21Q3ZAQ7 101 aa17.34■□□□□ 0.37
SPAST-204ENST00000621856 HCP5Q6MZN7 132 aa17.34■□□□□ 0.37
SPAST-204ENST00000621856 OR10P1Q8NGE3 313 aa17.34■□□□□ 0.37
SPAST-204ENST00000621856 SCGB1C1Q8TD33 95 aa17.34■□□□□ 0.37
SPAST-204ENST00000621856 PLA2G2EQ9NZK7 142 aa17.34■□□□□ 0.37
SPAST-204ENST00000621856 DPM3Q9P2X0 92 aa17.34■□□□□ 0.37
SPAST-204ENST00000621856 A0A1W2PRD5 423 aa17.33■□□□□ 0.37
SPAST-204ENST00000621856 A0A1W2PRF3 423 aa17.33■□□□□ 0.37
SPAST-204ENST00000621856 A0A1W2PRM7 423 aa17.33■□□□□ 0.37
SPAST-204ENST00000621856 CEACAM3P40198 252 aa17.33■□□□□ 0.37
SPAST-204ENST00000621856 OR4A5Q8NH83 315 aa17.33■□□□□ 0.37
SPAST-204ENST00000621856 GNPNAT1Q96EK6 184 aaPredicted RBP17.33■□□□□ 0.37
SPAST-204ENST00000621856 SIRPDQ9H106 197 aa17.33■□□□□ 0.37
SPAST-204ENST00000621856 MMP26Q9NRE1 261 aa17.33■□□□□ 0.37
SPAST-204ENST00000621856 ZNF257Q9Y2Q1 563 aa17.33■□□□□ 0.37
SPAST-204ENST00000621856 ANKRD34BA5PLL1 514 aa17.33■□□□□ 0.36
SPAST-204ENST00000621856 C15orf62A8K5M9 175 aa17.33■□□□□ 0.36
SPAST-204ENST00000621856 ODF3BA8MYP8 253 aa17.33■□□□□ 0.36
SPAST-204ENST00000621856 OR8U8P0C7N1 319 aa17.33■□□□□ 0.36
SPAST-204ENST00000621856 USF1P22415 310 aaPredicted RBP17.33■□□□□ 0.36
SPAST-204ENST00000621856 LGALS7P47929 136 aa17.33■□□□□ 0.36
SPAST-204ENST00000621856 TMEM182Q6ZP80 229 aaPredicted RBP17.33■□□□□ 0.36
SPAST-204ENST00000621856 OR2G3Q8NGZ4 309 aa17.33■□□□□ 0.36
SPAST-204ENST00000621856 SAT2Q96F10 170 aaPredicted RBP17.33■□□□□ 0.36
SPAST-204ENST00000621856 UNKLQ9H9P5 680 aaKnown RBP17.33■□□□□ 0.36
SPAST-204ENST00000621856 TOX4O94842 621 aa17.32■□□□□ 0.36
SPAST-204ENST00000621856 SCAF4O95104 1147 aaKnown RBP17.32■□□□□ 0.36
SPAST-204ENST00000621856 IGLV2-23P01705 113 aa17.32■□□□□ 0.36
SPAST-204ENST00000621856 OPN1MWP04001 364 aa17.32■□□□□ 0.36
SPAST-204ENST00000621856 OPN1MW2P0DN77 364 aa17.32■□□□□ 0.36
SPAST-204ENST00000621856 OPN1MW3P0DN78 364 aa17.32■□□□□ 0.36
SPAST-204ENST00000621856 HOXB4P17483 251 aaPredicted RBP17.32■□□□□ 0.36
SPAST-204ENST00000621856 RUNX1Q01196 453 aa17.32■□□□□ 0.36
SPAST-204ENST00000621856 ATP6V1FQ16864 119 aa17.32■□□□□ 0.36
SPAST-204ENST00000621856 TMEM167AQ8TBQ9 72 aa17.32■□□□□ 0.36
SPAST-204ENST00000621856 PINX1Q96BK5 328 aaKnown RBP17.32■□□□□ 0.36
SPAST-204ENST00000621856 LPAR2Q9HBW0 351 aa17.32■□□□□ 0.36
SPAST-204ENST00000621856 FAM208BQ5VWN6 2430 aa17.32■□□□□ 0.36
SPAST-204ENST00000621856 IGHV4-61A0A0C4DH41 118 aa17.31■□□□□ 0.36
SPAST-204ENST00000621856 TEX50A0A1B0GTY4 177 aa17.31■□□□□ 0.36
SPAST-204ENST00000621856 A0A1W2PPI3 338 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms