RNA–Protein interactions for RNA: ENST00000621783.4

CPNE3-212, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 817 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-212ENST00000621783 TPSG1Q9NRR2 321 aa8.55□□□□□ -1.04
CPNE3-212ENST00000621783 HSPB7Q9UBY9 170 aa8.55□□□□□ -1.04
CPNE3-212ENST00000621783 TNFSF18Q9UNG2 199 aa8.55□□□□□ -1.04
CPNE3-212ENST00000621783 FOXA2Q9Y261 457 aaPredicted RBP8.55□□□□□ -1.04
CPNE3-212ENST00000621783 NAV2Q8IVL1 2488 aa8.55□□□□□ -1.04
CPNE3-212ENST00000621783 ABCA12Q86UK0 2595 aa8.55□□□□□ -1.04
CPNE3-212ENST00000621783 HMSDA8MTL9 139 aa8.54□□□□□ -1.04
CPNE3-212ENST00000621783 WRBO00258 174 aa8.54□□□□□ -1.04
CPNE3-212ENST00000621783 SPDEFO95238 335 aa8.54□□□□□ -1.04
CPNE3-212ENST00000621783 MOSP00540 346 aa8.54□□□□□ -1.04
CPNE3-212ENST00000621783 RLN2P04090 185 aa8.54□□□□□ -1.04
CPNE3-212ENST00000621783 CRYGBP07316 175 aa8.54□□□□□ -1.04
CPNE3-212ENST00000621783 CXCL2P19875 107 aa8.54□□□□□ -1.04
CPNE3-212ENST00000621783 LGALS7P47929 136 aa8.54□□□□□ -1.04
CPNE3-212ENST00000621783 TNFRSF9Q07011 255 aa8.54□□□□□ -1.04
CPNE3-212ENST00000621783 KRTAP1-1Q07627 177 aa8.54□□□□□ -1.04
CPNE3-212ENST00000621783 HES1Q14469 280 aa8.54□□□□□ -1.04
CPNE3-212ENST00000621783 PSG5Q15238 335 aa8.54□□□□□ -1.04
CPNE3-212ENST00000621783 FAM120AOSQ5T036 256 aa8.54□□□□□ -1.04
CPNE3-212ENST00000621783 LAMTOR1Q6IAA8 161 aa8.54□□□□□ -1.04
CPNE3-212ENST00000621783 TMEM65Q6PI78 240 aa8.54□□□□□ -1.04
CPNE3-212ENST00000621783 OR2T10Q8NGZ9 312 aa8.54□□□□□ -1.04
CPNE3-212ENST00000621783 OR4A5Q8NH83 315 aa8.54□□□□□ -1.04
CPNE3-212ENST00000621783 VSTM2AQ8TAG5 236 aa8.54□□□□□ -1.04
CPNE3-212ENST00000621783 TMEM167AQ8TBQ9 72 aa8.54□□□□□ -1.04
CPNE3-212ENST00000621783 EAF1Q96JC9 268 aaPredicted RBP8.54□□□□□ -1.04
CPNE3-212ENST00000621783 RNF5Q99942 180 aa8.54□□□□□ -1.04
CPNE3-212ENST00000621783 RBKSQ9H477 322 aa8.54□□□□□ -1.04
CPNE3-212ENST00000621783 TMEM14BQ9NUH8 114 aa8.54□□□□□ -1.04
CPNE3-212ENST00000621783 SOX21Q9Y651 276 aaPredicted RBP8.54□□□□□ -1.04
CPNE3-212ENST00000621783 PDZD2O15018 2839 aa8.54□□□□□ -1.04
CPNE3-212ENST00000621783 RNF222A6NCQ9 220 aa8.53□□□□□ -1.04
CPNE3-212ENST00000621783 MSGN1A6NI15 193 aa8.53□□□□□ -1.04
CPNE3-212ENST00000621783 E5RGE8 158 aa8.53□□□□□ -1.04
CPNE3-212ENST00000621783 L7N2F9 121 aa8.53□□□□□ -1.04
CPNE3-212ENST00000621783 NBR2O15453 112 aa8.53□□□□□ -1.04
CPNE3-212ENST00000621783 KCNAB3O43448 404 aa8.53□□□□□ -1.04
CPNE3-212ENST00000621783 SYNGR2O43760 224 aa8.53□□□□□ -1.04
CPNE3-212ENST00000621783 MED6O75586 246 aa8.53□□□□□ -1.04
CPNE3-212ENST00000621783 FBP1P09467 338 aa8.53□□□□□ -1.04
CPNE3-212ENST00000621783 IAPPP10997 89 aa8.53□□□□□ -1.04
CPNE3-212ENST00000621783 MYOD1P15172 320 aa8.53□□□□□ -1.04
CPNE3-212ENST00000621783 TMEM11P17152 192 aa8.53□□□□□ -1.04
CPNE3-212ENST00000621783 BRS3P32247 399 aa8.53□□□□□ -1.04
CPNE3-212ENST00000621783 VAMP2P63027 116 aa8.53□□□□□ -1.04
CPNE3-212ENST00000621783 EBI3Q14213 229 aa8.53□□□□□ -1.04
CPNE3-212ENST00000621783 HNF4GQ14541 408 aa8.53□□□□□ -1.04
CPNE3-212ENST00000621783 MMDQ15546 238 aa8.53□□□□□ -1.04
CPNE3-212ENST00000621783 SPINK9Q5DT21 86 aa8.53□□□□□ -1.04
CPNE3-212ENST00000621783 ZNF546Q86UE3 836 aa8.53□□□□□ -1.04
CPNE3-212ENST00000621783 ZNF429Q86V71 674 aa8.53□□□□□ -1.04
CPNE3-212ENST00000621783 Q8N6K4 173 aa8.53□□□□□ -1.04
CPNE3-212ENST00000621783 TEX45Q8NA69 505 aa8.53□□□□□ -1.04
CPNE3-212ENST00000621783 OR52E5Q8NH55 327 aa8.53□□□□□ -1.04
CPNE3-212ENST00000621783 METTL1Q9UBP6 276 aaKnown RBP8.53□□□□□ -1.04
CPNE3-212ENST00000621783 NUP50Q9UKX7 468 aa8.53□□□□□ -1.04
CPNE3-212ENST00000621783 PRNDQ9UKY0 176 aa8.53□□□□□ -1.04
CPNE3-212ENST00000621783 TCF19Q9Y242 345 aa8.53□□□□□ -1.04
CPNE3-212ENST00000621783 OR51B2Q9Y5P1 312 aa8.53□□□□□ -1.04
CPNE3-212ENST00000621783 TACC2O95359 2948 aa8.53□□□□□ -1.04
CPNE3-212ENST00000621783 MDFIC2A0A1B0GVS7 189 aa8.52□□□□□ -1.05
CPNE3-212ENST00000621783 CEBPZOSA8MTT3 80 aa8.52□□□□□ -1.05
CPNE3-212ENST00000621783 RRHO14718 337 aa8.52□□□□□ -1.05
CPNE3-212ENST00000621783 CD5LO43866 347 aa8.52□□□□□ -1.05
CPNE3-212ENST00000621783 CHST1O43916 411 aa8.52□□□□□ -1.05
CPNE3-212ENST00000621783 NDUFA3O95167 84 aa8.52□□□□□ -1.05
CPNE3-212ENST00000621783 TMEM50AO95807 157 aa8.52□□□□□ -1.05
CPNE3-212ENST00000621783 IFNA17P01571 189 aa8.52□□□□□ -1.05
CPNE3-212ENST00000621783 PVALBP20472 110 aaPredicted RBP8.52□□□□□ -1.05
CPNE3-212ENST00000621783 DYNLT3P51808 116 aa8.52□□□□□ -1.05
CPNE3-212ENST00000621783 F2RL1P55085 397 aa8.52□□□□□ -1.05
CPNE3-212ENST00000621783 PAX9P55771 341 aa8.52□□□□□ -1.05
CPNE3-212ENST00000621783 BPIFB3P59826 476 aa8.52□□□□□ -1.05
CPNE3-212ENST00000621783 SPCS3P61009 180 aa8.52□□□□□ -1.05
CPNE3-212ENST00000621783 RPL8P62917 257 aaKnown RBP8.52□□□□□ -1.05
CPNE3-212ENST00000621783 ZNF345Q14585 488 aa8.52□□□□□ -1.05
CPNE3-212ENST00000621783 MRGPRG-AS1Q2M3A8 158 aa8.52□□□□□ -1.05
CPNE3-212ENST00000621783 TUSC1Q2TAM9 212 aa8.52□□□□□ -1.05
CPNE3-212ENST00000621783 LGALSLQ3ZCW2 172 aaPredicted RBP8.52□□□□□ -1.05
CPNE3-212ENST00000621783 PDLIM3Q53GG5 364 aaPredicted RBP8.52□□□□□ -1.05
CPNE3-212ENST00000621783 THNSL2Q86YJ6 484 aa8.52□□□□□ -1.05
CPNE3-212ENST00000621783 NPBQ8NG41 125 aa8.52□□□□□ -1.05
CPNE3-212ENST00000621783 NANPQ8TBE9 248 aa8.52□□□□□ -1.05
CPNE3-212ENST00000621783 AQP10Q96PS8 301 aa8.52□□□□□ -1.05
CPNE3-212ENST00000621783 RAB40CQ96S21 281 aa8.52□□□□□ -1.05
CPNE3-212ENST00000621783 MFFQ9GZY8 342 aa8.52□□□□□ -1.05
CPNE3-212ENST00000621783 MEGF9Q9H1U4 602 aa8.52□□□□□ -1.05
CPNE3-212ENST00000621783 FBXL15Q9H469 300 aa8.52□□□□□ -1.05
CPNE3-212ENST00000621783 ZNF430Q9H8G1 570 aaPredicted RBP8.52□□□□□ -1.05
CPNE3-212ENST00000621783 PLSCR3Q9NRY6 295 aa8.52□□□□□ -1.05
CPNE3-212ENST00000621783 KIAA1456Q9P272 454 aa8.52□□□□□ -1.05
CPNE3-212ENST00000621783 SIGLEC9Q9Y336 463 aa8.52□□□□□ -1.05
CPNE3-212ENST00000621783 FAM96BQ9Y3D0 163 aa8.52□□□□□ -1.05
CPNE3-212ENST00000621783 HSPB11Q9Y547 144 aa8.52□□□□□ -1.05
CPNE3-212ENST00000621783 UNC79Q9P2D8 2635 aa8.52□□□□□ -1.05
CPNE3-212ENST00000621783 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.51□□□□□ -1.055e-7■■■□□ 18.1
CPNE3-212ENST00000621783 H3BP45 60 aa8.51□□□□□ -1.05
CPNE3-212ENST00000621783 OR2F2O95006 317 aa8.51□□□□□ -1.05
CPNE3-212ENST00000621783 FGF2P09038 288 aa8.51□□□□□ -1.05
CPNE3-212ENST00000621783 FAM106CPP0CH98 169 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms