RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 PGLYRP1O75594 196 aaPredicted RBP8.31□□□□□ -1.08
CLTCL1-211ENST00000621271 MOSP00540 346 aa8.31□□□□□ -1.08
CLTCL1-211ENST00000621271 IGHMP01871 453 aa8.31□□□□□ -1.08
CLTCL1-211ENST00000621271 DEFB121Q5J5C9 76 aa8.31□□□□□ -1.08
CLTCL1-211ENST00000621271 HSF4Q9ULV5 492 aa8.31□□□□□ -1.08
CLTCL1-211ENST00000621271 KCNK7Q9Y2U2 307 aa8.31□□□□□ -1.08
CLTCL1-211ENST00000621271 ZNFX1Q9P2E3 1918 aaKnown RBP8.31□□□□□ -1.08
CLTCL1-211ENST00000621271 IGKV1D-42A0A075B6H8 117 aa8.31□□□□□ -1.08
CLTCL1-211ENST00000621271 IGLV3-12A0A075B6K2 115 aa8.31□□□□□ -1.08
CLTCL1-211ENST00000621271 LOC390937A0A1W2PQ73 354 aa8.31□□□□□ -1.08
CLTCL1-211ENST00000621271 TMEM204Q9BSN7 226 aa8.31□□□□□ -1.08
CLTCL1-211ENST00000621271 TMEM191AQ9H0A3 160 aa8.31□□□□□ -1.08
CLTCL1-211ENST00000621271 DOCK5Q9H7D0 1870 aa8.31□□□□□ -1.08
CLTCL1-211ENST00000621271 AKAP6Q13023 2319 aa8.31□□□□□ -1.08
CLTCL1-211ENST00000621271 A8MWL6 223 aa8.31□□□□□ -1.08
CLTCL1-211ENST00000621271 J3QKU1 62 aa8.31□□□□□ -1.08
CLTCL1-211ENST00000621271 MYOD1P15172 320 aa8.31□□□□□ -1.08
CLTCL1-211ENST00000621271 EMP1P54849 157 aa8.31□□□□□ -1.08
CLTCL1-211ENST00000621271 FAM74A4Q5TZK3 123 aa8.31□□□□□ -1.08
CLTCL1-211ENST00000621271 C3orf56Q8N813 242 aa8.31□□□□□ -1.08
CLTCL1-211ENST00000621271 ARPC1AQ92747 370 aa8.31□□□□□ -1.08
CLTCL1-211ENST00000621271 RBKSQ9H477 322 aa8.31□□□□□ -1.08
CLTCL1-211ENST00000621271 GSX1Q9H4S2 264 aaPredicted RBP8.31□□□□□ -1.08
CLTCL1-211ENST00000621271 ZNF56Q15929 161 aa8.31□□□□□ -1.08
CLTCL1-211ENST00000621271 PQLC2Q6ZP29 291 aa8.31□□□□□ -1.08
CLTCL1-211ENST00000621271 MAP1LC3CQ9BXW4 147 aa8.31□□□□□ -1.08
CLTCL1-211ENST00000621271 DNAJC4Q9NNZ3 241 aa8.31□□□□□ -1.08
CLTCL1-211ENST00000621271 C5orf52A6NGY3 159 aa8.3□□□□□ -1.08
CLTCL1-211ENST00000621271 CEACAM4O75871 244 aa8.3□□□□□ -1.08
CLTCL1-211ENST00000621271 ANOS1P23352 680 aa8.3□□□□□ -1.08
CLTCL1-211ENST00000621271 PRSS53Q2L4Q9 553 aa8.3□□□□□ -1.08
CLTCL1-211ENST00000621271 CYB5R2Q6BCY4 276 aa8.3□□□□□ -1.08
CLTCL1-211ENST00000621271 GTSCR1Q86UQ5 136 aa8.3□□□□□ -1.08
CLTCL1-211ENST00000621271 C11orf44Q8N8P7 122 aa8.3□□□□□ -1.08
CLTCL1-211ENST00000621271 DOPEY2Q9Y3R5 2298 aa8.3□□□□□ -1.08
CLTCL1-211ENST00000621271 PQLC2LA1A4F0 135 aa8.3□□□□□ -1.08
CLTCL1-211ENST00000621271 C17orf51A8MQB3 221 aa8.3□□□□□ -1.08
CLTCL1-211ENST00000621271 RAMP1O60894 148 aa8.3□□□□□ -1.08
CLTCL1-211ENST00000621271 IGHV3-11P01762 117 aa8.3□□□□□ -1.08
CLTCL1-211ENST00000621271 HKR1P10072 659 aa8.3□□□□□ -1.08
CLTCL1-211ENST00000621271 ZNF25P17030 456 aaPredicted RBP8.3□□□□□ -1.08
CLTCL1-211ENST00000621271 NPBWR2P48146 333 aa8.3□□□□□ -1.08
CLTCL1-211ENST00000621271 LHX2P50458 406 aa8.3□□□□□ -1.08
CLTCL1-211ENST00000621271 EFNA4P52798 201 aa8.3□□□□□ -1.08
CLTCL1-211ENST00000621271 SERF2P84101 59 aa8.3□□□□□ -1.08
CLTCL1-211ENST00000621271 PEAR1Q5VY43 1037 aaPredicted RBP8.3□□□□□ -1.08
CLTCL1-211ENST00000621271 OR51G1Q8NGK1 321 aa8.3□□□□□ -1.08
CLTCL1-211ENST00000621271 OSR1Q8TAX0 266 aaPredicted RBP8.3□□□□□ -1.08
CLTCL1-211ENST00000621271 BET1LQ9NYM9 111 aa8.3□□□□□ -1.08
CLTCL1-211ENST00000621271 OR5AC2Q9NZP5 309 aa8.3□□□□□ -1.08
CLTCL1-211ENST00000621271 TCF19Q9Y242 345 aa8.3□□□□□ -1.08
CLTCL1-211ENST00000621271 GREB1LQ9C091 1923 aaPredicted RBP8.3□□□□□ -1.08
CLTCL1-211ENST00000621271 EIF3GO75821 320 aaKnown RBP eCLIP8.3□□□□□ -1.08
CLTCL1-211ENST00000621271 MMP9P14780 707 aa8.3□□□□□ -1.08
CLTCL1-211ENST00000621271 PSG7Q13046 419 aa8.3□□□□□ -1.08
CLTCL1-211ENST00000621271 SEMA5BQ9P283 1151 aa8.3□□□□□ -1.08
CLTCL1-211ENST00000621271 IGHV3-49A0A0A0MS15 119 aa8.3□□□□□ -1.08
CLTCL1-211ENST00000621271 PITX3O75364 302 aa8.3□□□□□ -1.08
CLTCL1-211ENST00000621271 ATP6V0CP27449 155 aa8.3□□□□□ -1.08
CLTCL1-211ENST00000621271 RPS20P60866 119 aaKnown RBP8.3□□□□□ -1.08
CLTCL1-211ENST00000621271 CD69Q07108 199 aa8.3□□□□□ -1.08
CLTCL1-211ENST00000621271 ZNF146Q15072 292 aa8.3□□□□□ -1.08
CLTCL1-211ENST00000621271 ELOBQ15370 118 aa8.3□□□□□ -1.08
CLTCL1-211ENST00000621271 DPPA3Q6W0C5 159 aa8.3□□□□□ -1.08
CLTCL1-211ENST00000621271 G6PC2Q9NQR9 355 aa8.3□□□□□ -1.08
CLTCL1-211ENST00000621271 IL36RNQ9UBH0 155 aa8.3□□□□□ -1.08
CLTCL1-211ENST00000621271 OTOFQ9HC10 1997 aa8.29□□□□□ -1.08
CLTCL1-211ENST00000621271 A8MXK9 166 aa8.29□□□□□ -1.08
CLTCL1-211ENST00000621271 KLF4O43474 513 aa8.29□□□□□ -1.08
CLTCL1-211ENST00000621271 RPLP1P05386 114 aaKnown RBP8.29□□□□□ -1.08
CLTCL1-211ENST00000621271 HLA-DRB5Q30154 266 aa8.29□□□□□ -1.08
CLTCL1-211ENST00000621271 FAM90A26D6RGX4 464 aa8.29□□□□□ -1.08
CLTCL1-211ENST00000621271 IL18BPO95998 194 aa8.29□□□□□ -1.08
CLTCL1-211ENST00000621271 IGHV3-23P01764 117 aa8.29□□□□□ -1.08
CLTCL1-211ENST00000621271 TIMP3P35625 211 aa8.29□□□□□ -1.08
CLTCL1-211ENST00000621271 FAM90A1Q86YD7 464 aa8.29□□□□□ -1.08
CLTCL1-211ENST00000621271 VKORC1L1Q8N0U8 176 aa8.29□□□□□ -1.08
CLTCL1-211ENST00000621271 FUT9Q9Y231 359 aa8.29□□□□□ -1.08
CLTCL1-211ENST00000621271 LINC00312Q9Y6C7 94 aa8.29□□□□□ -1.08
CLTCL1-211ENST00000621271 ABCA4P78363 2273 aa8.29□□□□□ -1.08
CLTCL1-211ENST00000621271 TRAV34A0A0B4J273 112 aa8.29□□□□□ -1.08
CLTCL1-211ENST00000621271 TRAV40A0A0B4J280 105 aa8.29□□□□□ -1.08
CLTCL1-211ENST00000621271 PIN1P1O15428 100 aa8.29□□□□□ -1.08
CLTCL1-211ENST00000621271 ZNF207O43670 478 aaKnown RBP8.29□□□□□ -1.08
CLTCL1-211ENST00000621271 LMX1BO60663 402 aa8.29□□□□□ -1.08
CLTCL1-211ENST00000621271 ATP5IP56385 69 aaPredicted RBP8.29□□□□□ -1.08
CLTCL1-211ENST00000621271 ZP1P60852 638 aa8.29□□□□□ -1.08
CLTCL1-211ENST00000621271 NPIPB3Q92617 1050 aa8.29□□□□□ -1.08
CLTCL1-211ENST00000621271 DUX3Q96PT4 197 aa8.29□□□□□ -1.08
CLTCL1-211ENST00000621271 C21orf62Q9NYP8 219 aa8.29□□□□□ -1.08
CLTCL1-211ENST00000621271 GPR183P32249 361 aa8.29□□□□□ -1.08
CLTCL1-211ENST00000621271 C1orf100Q5SVJ3 147 aa8.29□□□□□ -1.08
CLTCL1-211ENST00000621271 POC1AQ8NBT0 407 aa8.29□□□□□ -1.08
CLTCL1-211ENST00000621271 ST6GALNAC3Q8NDV1 305 aa8.29□□□□□ -1.08
CLTCL1-211ENST00000621271 OR8A1Q8NGG7 326 aa8.29□□□□□ -1.08
CLTCL1-211ENST00000621271 OR13A1Q8NGR1 328 aa8.29□□□□□ -1.08
CLTCL1-211ENST00000621271 ZNF502Q8TBZ5 544 aa8.29□□□□□ -1.08
CLTCL1-211ENST00000621271 Q96M66 194 aa8.29□□□□□ -1.08
CLTCL1-211ENST00000621271 AQP10Q96PS8 301 aa8.29□□□□□ -1.08
CLTCL1-211ENST00000621271 TRGV2A0A075B6R0 118 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms