RNA–Protein interactions for RNA: ENST00000620786.4

CLIP1-219, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CLIP1, Length 5,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-219ENST00000620786 KBTBD11-OT1A0A1B0GTJ5 212 aa9.63□□□□□ -0.87
CLIP1-219ENST00000620786 PRB3Q04118 309 aaPredicted RBP9.63□□□□□ -0.87
CLIP1-219ENST00000620786 MEF2CQ06413 473 aaPredicted RBP9.63□□□□□ -0.87
CLIP1-219ENST00000620786 C1QTNF5Q9BXJ0 243 aa9.63□□□□□ -0.87
CLIP1-219ENST00000620786 PRSS22Q9GZN4 317 aa9.63□□□□□ -0.87
CLIP1-219ENST00000620786 PRO1933Q9H354 126 aa9.63□□□□□ -0.87
CLIP1-219ENST00000620786 FOXA2Q9Y261 457 aaPredicted RBP9.63□□□□□ -0.87
CLIP1-219ENST00000620786 ARID2Q68CP9 1835 aa9.63□□□□□ -0.87
CLIP1-219ENST00000620786 LOC102723996A0A087X1L8 192 aa9.63□□□□□ -0.87
CLIP1-219ENST00000620786 CA2P00918 260 aa9.63□□□□□ -0.87
CLIP1-219ENST00000620786 C2orf83Q53S99 150 aa9.63□□□□□ -0.87
CLIP1-219ENST00000620786 PATJQ8NI35 1801 aa9.63□□□□□ -0.87
CLIP1-219ENST00000620786 IGLV3-12A0A075B6K2 115 aa9.63□□□□□ -0.87
CLIP1-219ENST00000620786 IGHV3-11P01762 117 aa9.63□□□□□ -0.87
CLIP1-219ENST00000620786 GPR183P32249 361 aa9.63□□□□□ -0.87
CLIP1-219ENST00000620786 ZNF343Q6P1L6 599 aa9.63□□□□□ -0.87
CLIP1-219ENST00000620786 OR13A1Q8NGR1 328 aa9.63□□□□□ -0.87
CLIP1-219ENST00000620786 DUX3Q96PT4 197 aa9.63□□□□□ -0.87
CLIP1-219ENST00000620786 DEPPQ9NTK1 212 aa9.63□□□□□ -0.87
CLIP1-219ENST00000620786 C12orf77C9JDV5 145 aa9.62□□□□□ -0.87
CLIP1-219ENST00000620786 H3BVH4 76 aa9.62□□□□□ -0.87
CLIP1-219ENST00000620786 EMP1P54849 157 aa9.62□□□□□ -0.87
CLIP1-219ENST00000620786 LINC00305Q7Z4B0 112 aa9.62□□□□□ -0.87
CLIP1-219ENST00000620786 MRPL20Q9BYC9 149 aaKnown RBP9.62□□□□□ -0.87
CLIP1-219ENST00000620786 ZFP30Q9Y2G7 519 aa9.62□□□□□ -0.87
CLIP1-219ENST00000620786 C7orf77A4D0Y5 90 aa9.62□□□□□ -0.87
CLIP1-219ENST00000620786 C9JCJ5 164 aa9.62□□□□□ -0.87
CLIP1-219ENST00000620786 SRSF12Q8WXF0 261 aaKnown RBP9.62□□□□□ -0.87
CLIP1-219ENST00000620786 SLC25A38Q96DW6 304 aa9.62□□□□□ -0.87
CLIP1-219ENST00000620786 MRPL32Q9BYC8 188 aaKnown RBP9.62□□□□□ -0.87
CLIP1-219ENST00000620786 PINLYPA6NC86 204 aa9.62□□□□□ -0.87
CLIP1-219ENST00000620786 PIN1P1O15428 100 aa9.62□□□□□ -0.87
CLIP1-219ENST00000620786 CEACAM4O75871 244 aa9.62□□□□□ -0.87
CLIP1-219ENST00000620786 ABLIM2Q6H8Q1 611 aa9.62□□□□□ -0.87
CLIP1-219ENST00000620786 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.62□□□□□ -0.87
CLIP1-219ENST00000620786 LINC00312Q9Y6C7 94 aa9.62□□□□□ -0.87
CLIP1-219ENST00000620786 CYP2G1PQ6ZSU1 146 aa9.62□□□□□ -0.87
CLIP1-219ENST00000620786 OSR1Q8TAX0 266 aaPredicted RBP9.62□□□□□ -0.87
CLIP1-219ENST00000620786 SEMA5BQ9P283 1151 aa9.62□□□□□ -0.87
CLIP1-219ENST00000620786 TCRBV4S1A1TA0A5B7 111 aa9.61□□□□□ -0.87
CLIP1-219ENST00000620786 LYNX1G3V0Z9 82 aa9.61□□□□□ -0.87
CLIP1-219ENST00000620786 M0R143 59 aa9.61□□□□□ -0.87
CLIP1-219ENST00000620786 LYNX1P0DP58 116 aa9.61□□□□□ -0.87
CLIP1-219ENST00000620786 FAM90A1Q86YD7 464 aa9.61□□□□□ -0.87
CLIP1-219ENST00000620786 CYB561D1Q8N8Q1 229 aa9.61□□□□□ -0.87
CLIP1-219ENST00000620786 SGMS2Q8NHU3 365 aa9.61□□□□□ -0.87
CLIP1-219ENST00000620786 NMUP48645 174 aa9.61□□□□□ -0.87
CLIP1-219ENST00000620786 DSCR9P59020 149 aa9.61□□□□□ -0.87
CLIP1-219ENST00000620786 GOLT1AQ6ZVE7 132 aa9.61□□□□□ -0.87
CLIP1-219ENST00000620786 RAB37Q96AX2 223 aa9.61□□□□□ -0.87
CLIP1-219ENST00000620786 ZNF837Q96EG3 531 aaPredicted RBP9.61□□□□□ -0.87
CLIP1-219ENST00000620786 NABP2Q9BQ15 211 aa9.61□□□□□ -0.87
CLIP1-219ENST00000620786 MAP1LC3AQ9H492 121 aa9.61□□□□□ -0.87
CLIP1-219ENST00000620786 A0A0G2JMZ2 1700 aa9.61□□□□□ -0.87
CLIP1-219ENST00000620786 LRRC37A2A6NM11 1700 aa9.61□□□□□ -0.87
CLIP1-219ENST00000620786 TMEM14DPA8MWL7 114 aa9.61□□□□□ -0.87
CLIP1-219ENST00000620786 TMEM187Q14656 261 aa9.61□□□□□ -0.87
CLIP1-219ENST00000620786 SGK494Q96LW2 274 aa9.61□□□□□ -0.87
CLIP1-219ENST00000620786 BET1LQ9NYM9 111 aa9.61□□□□□ -0.87
CLIP1-219ENST00000620786 TRGC1P0CF51 173 aa9.61□□□□□ -0.87
CLIP1-219ENST00000620786 NCMAPQ5T1S8 102 aa9.61□□□□□ -0.87
CLIP1-219ENST00000620786 CDC42EP3Q9UKI2 254 aa9.61□□□□□ -0.87
CLIP1-219ENST00000620786 ADIPOQQ15848 244 aa9.61□□□□□ -0.87
CLIP1-219ENST00000620786 SIGIRRQ6IA17 410 aa9.61□□□□□ -0.87
CLIP1-219ENST00000620786 SMIM8Q96KF7 97 aa9.61□□□□□ -0.87
CLIP1-219ENST00000620786 IFITM10A6NMD0 228 aa9.6□□□□□ -0.87
CLIP1-219ENST00000620786 AP4M1O00189 453 aa9.6□□□□□ -0.87
CLIP1-219ENST00000620786 C5orf66Q9H5L9 145 aa9.6□□□□□ -0.87
CLIP1-219ENST00000620786 UNC13CQ8NB66 2214 aa9.6□□□□□ -0.87
CLIP1-219ENST00000620786 IGHV1-18A0A0C4DH31 117 aa9.6□□□□□ -0.87
CLIP1-219ENST00000620786 CIDEAO60543 219 aa9.6□□□□□ -0.87
CLIP1-219ENST00000620786 GCGP01275 180 aa9.6□□□□□ -0.87
CLIP1-219ENST00000620786 C21orf62Q9NYP8 219 aa9.6□□□□□ -0.87
CLIP1-219ENST00000620786 LINC01587Q99440 93 aa9.6□□□□□ -0.87
CLIP1-219ENST00000620786 C19orf24Q9BVV8 132 aa9.6□□□□□ -0.87
CLIP1-219ENST00000620786 OR4A47Q6IF82 309 aa9.6□□□□□ -0.87
CLIP1-219ENST00000620786 CLDND2Q8NHS1 167 aa9.6□□□□□ -0.87
CLIP1-219ENST00000620786 SMIM12Q96EX1 92 aa9.6□□□□□ -0.87
CLIP1-219ENST00000620786 CCL3L1P16619 93 aa9.6□□□□□ -0.87
CLIP1-219ENST00000620786 SULT1A2P50226 295 aa9.6□□□□□ -0.87
CLIP1-219ENST00000620786 UCP3P55916 312 aa9.6□□□□□ -0.87
CLIP1-219ENST00000620786 CBLN2Q8IUK8 224 aa9.6□□□□□ -0.87
CLIP1-219ENST00000620786 ZCCHC24Q8N2G6 241 aaKnown RBP9.6□□□□□ -0.87
CLIP1-219ENST00000620786 STPG2Q8N412 459 aa9.6□□□□□ -0.87
CLIP1-219ENST00000620786 TXNDC17Q9BRA2 123 aa9.6□□□□□ -0.87
CLIP1-219ENST00000620786 AICDAQ9GZX7 198 aa9.6□□□□□ -0.87
CLIP1-219ENST00000620786 RNASE1P07998 156 aaKnown RBP9.59□□□□□ -0.87
CLIP1-219ENST00000620786 CRYBB3P26998 211 aa9.59□□□□□ -0.87
CLIP1-219ENST00000620786 NEU1Q99519 415 aa9.59□□□□□ -0.87
CLIP1-219ENST00000620786 M0QZK8 103 aa9.59□□□□□ -0.87
CLIP1-219ENST00000620786 PPP1R17O96001 155 aa9.59□□□□□ -0.87
CLIP1-219ENST00000620786 C1QL2Q7Z5L3 287 aa9.59□□□□□ -0.87
CLIP1-219ENST00000620786 RAB24Q969Q5 203 aa9.59□□□□□ -0.87
CLIP1-219ENST00000620786 TMEM101Q96IK0 257 aa9.59□□□□□ -0.87
CLIP1-219ENST00000620786 MTCL1Q9Y4B5 1905 aaKnown RBP9.59□□□□□ -0.87
CLIP1-219ENST00000620786 TRAV40A0A0B4J280 105 aa9.59□□□□□ -0.87
CLIP1-219ENST00000620786 C11orf44Q8N8P7 122 aa9.59□□□□□ -0.87
CLIP1-219ENST00000620786 TP53RKQ96S44 253 aa9.59□□□□□ -0.87
CLIP1-219ENST00000620786 PPP1R3EQ9H7J1 279 aa9.59□□□□□ -0.87
CLIP1-219ENST00000620786 DOCK3Q8IZD9 2030 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms