RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 CXCL13O43927 109 aa12.99□□□□□ -0.33
COL5A1-208ENST00000618395 LEPP41159 167 aa12.99□□□□□ -0.33
COL5A1-208ENST00000618395 RABAC1Q9UI14 185 aa12.99□□□□□ -0.33
COL5A1-208ENST00000618395 DPTQ07507 201 aa12.99□□□□□ -0.33
COL5A1-208ENST00000618395 MRPS18BQ9Y676 258 aaKnown RBP12.99□□□□□ -0.33
COL5A1-208ENST00000618395 A0A1B0GWJ7 208 aa12.98□□□□□ -0.33
COL5A1-208ENST00000618395 CEACAM1P13688 526 aa12.98□□□□□ -0.33
COL5A1-208ENST00000618395 LSM6P62312 80 aaKnown RBP12.98□□□□□ -0.33
COL5A1-208ENST00000618395 CLLU1OSQ5K130 101 aa12.98□□□□□ -0.33
COL5A1-208ENST00000618395 TMEM242Q9NWH2 141 aa12.98□□□□□ -0.33
COL5A1-208ENST00000618395 CRYGNQ8WXF5 182 aa12.98□□□□□ -0.33
COL5A1-208ENST00000618395 C1RLQ9NZP8 487 aa12.98□□□□□ -0.33
COL5A1-208ENST00000618395 HCFC1P51610 2035 aa12.98□□□□□ -0.33
COL5A1-208ENST00000618395 TRPM3Q9HCF6 1732 aaPredicted RBP12.98□□□□□ -0.33
COL5A1-208ENST00000618395 APELAP0DMC3 54 aa12.98□□□□□ -0.33
COL5A1-208ENST00000618395 PCDH15Q96QU1 1955 aa12.98□□□□□ -0.33
COL5A1-208ENST00000618395 OR9G9P0C7N8 305 aa12.98□□□□□ -0.33
COL5A1-208ENST00000618395 CCL11P51671 97 aa12.98□□□□□ -0.33
COL5A1-208ENST00000618395 KIR3DS1Q14943 382 aa12.98□□□□□ -0.33
COL5A1-208ENST00000618395 COL6A6A6NMZ7 2263 aa12.98□□□□□ -0.33
COL5A1-208ENST00000618395 DOCK1Q14185 1865 aa12.98□□□□□ -0.33
COL5A1-208ENST00000618395 K7N7A8 449 aa12.98□□□□□ -0.33
COL5A1-208ENST00000618395 CFAP161Q6P656 301 aa12.98□□□□□ -0.33
COL5A1-208ENST00000618395 SCN7AQ01118 1682 aa12.98□□□□□ -0.33
COL5A1-208ENST00000618395 PEX7O00628 323 aa12.98□□□□□ -0.33
COL5A1-208ENST00000618395 TMPRSS2O15393 492 aa12.98□□□□□ -0.33
COL5A1-208ENST00000618395 LHX8Q68G74 356 aa12.98□□□□□ -0.33
COL5A1-208ENST00000618395 SARGQ9BW04 601 aa12.98□□□□□ -0.33
COL5A1-208ENST00000618395 INSIG2Q9Y5U4 225 aa12.98□□□□□ -0.33
COL5A1-208ENST00000618395 LINC01559Q495D7 138 aa12.97□□□□□ -0.33
COL5A1-208ENST00000618395 FER1L6-AS1Q8NA97 138 aa12.97□□□□□ -0.33
COL5A1-208ENST00000618395 AQP3Q92482 292 aa12.97□□□□□ -0.33
COL5A1-208ENST00000618395 KLF13Q9Y2Y9 288 aaPredicted RBP12.97□□□□□ -0.33
COL5A1-208ENST00000618395 NEUROG3Q9Y4Z2 214 aa12.97□□□□□ -0.33
COL5A1-208ENST00000618395 PEX11BO96011 259 aa12.97□□□□□ -0.33
COL5A1-208ENST00000618395 SERTM1A2A2V5 107 aa12.97□□□□□ -0.33
COL5A1-208ENST00000618395 SYNGR3O43761 229 aa12.97□□□□□ -0.33
COL5A1-208ENST00000618395 ZDHHC16Q969W1 377 aa12.97□□□□□ -0.33
COL5A1-208ENST00000618395 USP54Q70EL1 1684 aa12.97□□□□□ -0.33
COL5A1-208ENST00000618395 AZU1P20160 251 aa12.97□□□□□ -0.33
COL5A1-208ENST00000618395 C1orf122Q6ZSJ8 110 aa12.97□□□□□ -0.33
COL5A1-208ENST00000618395 LRTM2Q8N967 370 aa12.97□□□□□ -0.33
COL5A1-208ENST00000618395 FAM181BA6NEQ2 426 aa12.97□□□□□ -0.33
COL5A1-208ENST00000618395 WFDC8Q8IUA0 241 aa12.97□□□□□ -0.33
COL5A1-208ENST00000618395 IGKCP01834 107 aa12.97□□□□□ -0.33
COL5A1-208ENST00000618395 PYY3Q5JQD4 70 aa12.97□□□□□ -0.33
COL5A1-208ENST00000618395 MDP1Q86V88 176 aa12.97□□□□□ -0.33
COL5A1-208ENST00000618395 CLEC1BQ9P126 229 aa12.97□□□□□ -0.33
COL5A1-208ENST00000618395 CRYBG1Q9Y4K1 1723 aa12.97□□□□□ -0.33
COL5A1-208ENST00000618395 TNFSF14O43557 240 aa12.96□□□□□ -0.33
COL5A1-208ENST00000618395 LOXL3P58215 753 aa12.96□□□□□ -0.33
COL5A1-208ENST00000618395 RPRMQ9NS64 109 aa12.96□□□□□ -0.33
COL5A1-208ENST00000618395 GAGE5Q13069 117 aa12.96□□□□□ -0.33
COL5A1-208ENST00000618395 GAGE6Q13070 117 aa12.96□□□□□ -0.33
COL5A1-208ENST00000618395 TBC1D29Q9UFV1 150 aa12.96□□□□□ -0.33
COL5A1-208ENST00000618395 PATJQ8NI35 1801 aa12.96□□□□□ -0.33
COL5A1-208ENST00000618395 PLCH1Q4KWH8 1693 aa12.96□□□□□ -0.33
COL5A1-208ENST00000618395 HBDP02042 147 aa12.96□□□□□ -0.33
COL5A1-208ENST00000618395 GCHFRP30047 84 aa12.96□□□□□ -0.33
COL5A1-208ENST00000618395 C1orf174Q8IYL3 243 aa12.96□□□□□ -0.33
COL5A1-208ENST00000618395 A0A0U1RQV5 110 aa12.96□□□□□ -0.33
COL5A1-208ENST00000618395 FMC1Q96HJ9 113 aa12.96□□□□□ -0.33
COL5A1-208ENST00000618395 A0A087X0K7 114 aa12.96□□□□□ -0.34
COL5A1-208ENST00000618395 PRRG2O14669 202 aa12.96□□□□□ -0.34
COL5A1-208ENST00000618395 GZMBP10144 247 aa12.96□□□□□ -0.34
COL5A1-208ENST00000618395 BCL6BQ8N143 479 aaPredicted RBP12.96□□□□□ -0.34
COL5A1-208ENST00000618395 PLCE1Q9P212 2302 aa12.95□□□□□ -0.34
COL5A1-208ENST00000618395 NPFFO15130 113 aa12.95□□□□□ -0.34
COL5A1-208ENST00000618395 EBLN2Q6P2I7 272 aa12.95□□□□□ -0.34
COL5A1-208ENST00000618395 PSG3Q16557 428 aa12.95□□□□□ -0.34
COL5A1-208ENST00000618395 C8orf82Q6P1X6 216 aaPredicted RBP12.95□□□□□ -0.34
COL5A1-208ENST00000618395 WFDC3Q8IUB2 231 aa12.95□□□□□ -0.34
COL5A1-208ENST00000618395 ZNF114Q8NC26 417 aa12.95□□□□□ -0.34
COL5A1-208ENST00000618395 SLC25A10Q9UBX3 287 aaPredicted RBP12.95□□□□□ -0.34
COL5A1-208ENST00000618395 LRP6O75581 1613 aa12.95□□□□□ -0.34
COL5A1-208ENST00000618395 CDKN1BP46527 198 aa12.95□□□□□ -0.34
COL5A1-208ENST00000618395 TMEM52BQ4KMG9 183 aa12.95□□□□□ -0.34
COL5A1-208ENST00000618395 CT83Q5H943 113 aa12.95□□□□□ -0.34
COL5A1-208ENST00000618395 COLCA2A8K830 154 aa12.95□□□□□ -0.34
COL5A1-208ENST00000618395 DLL1O00548 723 aa12.95□□□□□ -0.34
COL5A1-208ENST00000618395 CD5LO43866 347 aa12.95□□□□□ -0.34
COL5A1-208ENST00000618395 NKX2-2O95096 273 aa12.95□□□□□ -0.34
COL5A1-208ENST00000618395 MOSP00540 346 aa12.95□□□□□ -0.34
COL5A1-208ENST00000618395 FBLIM1Q8WUP2 373 aa12.95□□□□□ -0.34
COL5A1-208ENST00000618395 A0A1W2PPC1 479 aa12.95□□□□□ -0.34
COL5A1-208ENST00000618395 SEPSECSQ9HD40 501 aaKnown RBP12.95□□□□□ -0.34
COL5A1-208ENST00000618395 ZNF488Q96MN9 340 aa12.95□□□□□ -0.34
COL5A1-208ENST00000618395 DIRC2Q96SL1 478 aa12.95□□□□□ -0.34
COL5A1-208ENST00000618395 RPP21Q9H633 154 aaKnown RBP12.95□□□□□ -0.34
COL5A1-208ENST00000618395 GREB1LQ9C091 1923 aaPredicted RBP12.95□□□□□ -0.34
COL5A1-208ENST00000618395 STRCQ7RTU9 1775 aa12.95□□□□□ -0.34
COL5A1-208ENST00000618395 MUC21A0A0G2JKD1 596 aa12.95□□□□□ -0.34
COL5A1-208ENST00000618395 MUC21A0A140T8X8 626 aa12.95□□□□□ -0.34
COL5A1-208ENST00000618395 CGB1A6NKQ9 187 aa12.95□□□□□ -0.34
COL5A1-208ENST00000618395 MUC21Q5SSG8 566 aa12.95□□□□□ -0.34
COL5A1-208ENST00000618395 FAM181AQ8N9Y4 354 aa12.95□□□□□ -0.34
COL5A1-208ENST00000618395 OVOL2Q9BRP0 275 aa12.95□□□□□ -0.34
COL5A1-208ENST00000618395 SOX8P57073 446 aa12.94□□□□□ -0.34
COL5A1-208ENST00000618395 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.94□□□□□ -0.34
COL5A1-208ENST00000618395 ASCL5Q7RTU5 278 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms