RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 GCSAMLQ5JQS6 135 aa9.58□□□□□ -0.88
CCDC144B-208ENST00000618081 CBLN2Q8IUK8 224 aa9.58□□□□□ -0.88
CCDC144B-208ENST00000618081 OR4D5Q8NGN0 318 aa9.58□□□□□ -0.88
CCDC144B-208ENST00000618081 RGP1Q92546 391 aaPredicted RBP9.58□□□□□ -0.88
CCDC144B-208ENST00000618081 SPSB4Q96A44 273 aa9.58□□□□□ -0.88
CCDC144B-208ENST00000618081 JMJD8Q96S16 334 aa9.58□□□□□ -0.88
CCDC144B-208ENST00000618081 HSPB9Q9BQS6 159 aa9.58□□□□□ -0.88
CCDC144B-208ENST00000618081 C7orf66A4D0T2 115 aa9.58□□□□□ -0.88
CCDC144B-208ENST00000618081 C19orf48Q6RUI8 117 aa9.58□□□□□ -0.88
CCDC144B-208ENST00000618081 DTX4Q9Y2E6 619 aa9.58□□□□□ -0.88
CCDC144B-208ENST00000618081 H3BRM9 83 aa9.58□□□□□ -0.88
CCDC144B-208ENST00000618081 CELA2AP08217 269 aa9.58□□□□□ -0.88
CCDC144B-208ENST00000618081 SP9P0CG40 484 aa9.58□□□□□ -0.88
CCDC144B-208ENST00000618081 SRSF12Q8WXF0 261 aaKnown RBP9.58□□□□□ -0.88
CCDC144B-208ENST00000618081 TAF15Q92804 592 aaKnown RBP eCLIP9.58□□□□□ -0.88
CCDC144B-208ENST00000618081 LRRC37AA6NMS7 1700 aa9.58□□□□□ -0.88
CCDC144B-208ENST00000618081 TMEM250H0YL14 139 aa9.58□□□□□ -0.88
CCDC144B-208ENST00000618081 TSPAN13O95857 204 aa9.58□□□□□ -0.88
CCDC144B-208ENST00000618081 IGKV1D-16P01601 117 aa9.58□□□□□ -0.88
CCDC144B-208ENST00000618081 HSPE1P61604 102 aaKnown RBP9.58□□□□□ -0.88
CCDC144B-208ENST00000618081 HIST1H1AQ02539 215 aaPredicted RBP9.58□□□□□ -0.88
CCDC144B-208ENST00000618081 SAPCD1Q5SSQ6 148 aa9.58□□□□□ -0.88
CCDC144B-208ENST00000618081 SLC16A13Q7RTY0 426 aa9.58□□□□□ -0.88
CCDC144B-208ENST00000618081 PKDREJQ9NTG1 2253 aa9.58□□□□□ -0.88
CCDC144B-208ENST00000618081 ALX4Q9H161 411 aaPredicted RBP9.58□□□□□ -0.88
CCDC144B-208ENST00000618081 NRXN2Q9P2S2 1712 aa9.58□□□□□ -0.88
CCDC144B-208ENST00000618081 ZSWIM8A7E2V4 1837 aa9.58□□□□□ -0.88
CCDC144B-208ENST00000618081 TM4SF5O14894 197 aa9.58□□□□□ -0.88
CCDC144B-208ENST00000618081 SNAI3Q3KNW1 292 aa9.58□□□□□ -0.88
CCDC144B-208ENST00000618081 ZNF826PQ6ZT77 177 aa9.58□□□□□ -0.88
CCDC144B-208ENST00000618081 MRPL18Q9H0U6 180 aaKnown RBP9.58□□□□□ -0.88
CCDC144B-208ENST00000618081 OR4X2Q8NGF9 303 aa9.58□□□□□ -0.88
CCDC144B-208ENST00000618081 HSPB1P04792 205 aaKnown RBP9.57□□□□□ -0.88
CCDC144B-208ENST00000618081 NEU4Q8WWR8 484 aaPredicted RBP9.57□□□□□ -0.88
CCDC144B-208ENST00000618081 HLA-DRB1P01911 266 aa9.57□□□□□ -0.88
CCDC144B-208ENST00000618081 DNASE2BQ8WZ79 361 aa9.57□□□□□ -0.88
CCDC144B-208ENST00000618081 KLK15Q9H2R5 256 aa9.57□□□□□ -0.88
CCDC144B-208ENST00000618081 COX5BP10606 129 aa9.57□□□□□ -0.88
CCDC144B-208ENST00000618081 IL11P20809 199 aa9.57□□□□□ -0.88
CCDC144B-208ENST00000618081 SP7Q8TDD2 431 aaPredicted RBP9.57□□□□□ -0.88
CCDC144B-208ENST00000618081 TLNRD1Q9H1K6 362 aa9.57□□□□□ -0.88
CCDC144B-208ENST00000618081 C7orf71A4D174 169 aa9.57□□□□□ -0.88
CCDC144B-208ENST00000618081 PSMB11A5LHX3 300 aa9.57□□□□□ -0.88
CCDC144B-208ENST00000618081 IGKV3-20P01619 116 aa9.57□□□□□ -0.88
CCDC144B-208ENST00000618081 MALP21145 153 aa9.57□□□□□ -0.88
CCDC144B-208ENST00000618081 EFNB2P52799 333 aa9.57□□□□□ -0.88
CCDC144B-208ENST00000618081 FAM131CQ96AQ9 280 aa9.57□□□□□ -0.88
CCDC144B-208ENST00000618081 DUX3Q96PT4 197 aa9.57□□□□□ -0.88
CCDC144B-208ENST00000618081 PRSS23O95084 383 aa9.57□□□□□ -0.88
CCDC144B-208ENST00000618081 STAG3L3P0CL85 134 aa9.57□□□□□ -0.88
CCDC144B-208ENST00000618081 EMP1P54849 157 aa9.57□□□□□ -0.88
CCDC144B-208ENST00000618081 SLC25A47Q6Q0C1 308 aa9.57□□□□□ -0.88
CCDC144B-208ENST00000618081 BEND2Q8NDZ0 799 aa9.57□□□□□ -0.88
CCDC144B-208ENST00000618081 SAP25Q8TEE9 199 aa9.57□□□□□ -0.88
CCDC144B-208ENST00000618081 PEMTQ9UBM1 199 aa9.57□□□□□ -0.88
CCDC144B-208ENST00000618081 SNRPCP09234 159 aaKnown RBP9.57□□□□□ -0.88
CCDC144B-208ENST00000618081 MIC13Q5XKP0 118 aa9.57□□□□□ -0.88
CCDC144B-208ENST00000618081 Q6ZT83 130 aa9.57□□□□□ -0.88
CCDC144B-208ENST00000618081 NRTNQ99748 197 aa9.57□□□□□ -0.88
CCDC144B-208ENST00000618081 PGLYRP1O75594 196 aaPredicted RBP9.57□□□□□ -0.88
CCDC144B-208ENST00000618081 IL4P05112 153 aa9.57□□□□□ -0.88
CCDC144B-208ENST00000618081 CD69Q07108 199 aa9.57□□□□□ -0.88
CCDC144B-208ENST00000618081 PNKDQ8N490 385 aa9.57□□□□□ -0.88
CCDC144B-208ENST00000618081 ITLN2Q8WWU7 325 aaPredicted RBP9.57□□□□□ -0.88
CCDC144B-208ENST00000618081 DLL3Q9NYJ7 618 aa9.57□□□□□ -0.88
CCDC144B-208ENST00000618081 JKAMPQ9P055 326 aa9.57□□□□□ -0.88
CCDC144B-208ENST00000618081 UQCR10Q9UDW1 63 aa9.57□□□□□ -0.88
CCDC144B-208ENST00000618081 KLHDC2Q9Y2U9 406 aa9.57□□□□□ -0.88
CCDC144B-208ENST00000618081 COX6A1P12074 109 aa9.56□□□□□ -0.88
CCDC144B-208ENST00000618081 TIMM23BQ5SRD1 257 aa9.56□□□□□ -0.88
CCDC144B-208ENST00000618081 SCARF2Q96GP6 870 aaPredicted RBP9.56□□□□□ -0.88
CCDC144B-208ENST00000618081 EML6Q6ZMW3 1958 aa9.56□□□□□ -0.88
CCDC144B-208ENST00000618081 NPIPB8E9PQR5 432 aa9.56□□□□□ -0.88
CCDC144B-208ENST00000618081 RPS11P62280 158 aaKnown RBP eCLIP9.56□□□□□ -0.88
CCDC144B-208ENST00000618081 C10orf111Q8N326 155 aa9.56□□□□□ -0.88
CCDC144B-208ENST00000618081 MRPS18AQ9NVS2 196 aaKnown RBP9.56□□□□□ -0.88
CCDC144B-208ENST00000618081 TRBV20OR9-2A0A075B6H5 130 aa9.56□□□□□ -0.88
CCDC144B-208ENST00000618081 LNP1A1A4G5 178 aa9.56□□□□□ -0.88
CCDC144B-208ENST00000618081 NANOS3P60323 173 aaKnown RBP9.56□□□□□ -0.88
CCDC144B-208ENST00000618081 FAM219BQ5XKK7 198 aa9.56□□□□□ -0.88
CCDC144B-208ENST00000618081 SLC25A20O43772 301 aa9.56□□□□□ -0.88
CCDC144B-208ENST00000618081 SLC25A45Q8N413 288 aa9.56□□□□□ -0.88
CCDC144B-208ENST00000618081 SDF2L1Q9HCN8 221 aa9.56□□□□□ -0.88
CCDC144B-208ENST00000618081 LINC00305Q7Z4B0 112 aa9.56□□□□□ -0.88
CCDC144B-208ENST00000618081 TRAF4Q9BUZ4 470 aaPredicted RBP9.56□□□□□ -0.88
CCDC144B-208ENST00000618081 DPH3P1Q9H4G8 78 aa9.55□□□□□ -0.88
CCDC144B-208ENST00000618081 GREB1LQ9C091 1923 aaPredicted RBP9.55□□□□□ -0.88
CCDC144B-208ENST00000618081 CXorf65A6NEN9 183 aa9.55□□□□□ -0.88
CCDC144B-208ENST00000618081 FOXI3A8MTJ6 420 aaPredicted RBP9.55□□□□□ -0.88
CCDC144B-208ENST00000618081 IFI6P09912 130 aa9.55□□□□□ -0.88
CCDC144B-208ENST00000618081 LINC00862A6NCI5 91 aa9.55□□□□□ -0.88
CCDC144B-208ENST00000618081 UNC119Q13432 240 aa9.55□□□□□ -0.88
CCDC144B-208ENST00000618081 GOLT1AQ6ZVE7 132 aa9.55□□□□□ -0.88
CCDC144B-208ENST00000618081 GTSCR1Q86UQ5 136 aa9.55□□□□□ -0.88
CCDC144B-208ENST00000618081 GP6Q9HCN6 339 aa9.55□□□□□ -0.88
CCDC144B-208ENST00000618081 ZNF815PA8K554 130 aa9.55□□□□□ -0.88
CCDC144B-208ENST00000618081 VKORC1L1Q8N0U8 176 aa9.55□□□□□ -0.88
CCDC144B-208ENST00000618081 TMEM52Q8NDY8 209 aa9.55□□□□□ -0.88
CCDC144B-208ENST00000618081 SFRP2Q96HF1 295 aa9.55□□□□□ -0.88
CCDC144B-208ENST00000618081 AKIRIN1Q9H9L7 192 aaPredicted RBP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms