RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 FAM157AC9JC47 383 aa14.13□□□□□ -0.15
PCDHGC3-205ENST00000617641 OR8U8P0C7N1 319 aa14.13□□□□□ -0.15
PCDHGC3-205ENST00000617641 ATP6V1FQ16864 119 aa14.13□□□□□ -0.15
PCDHGC3-205ENST00000617641 DHRS7BQ6IAN0 325 aaPredicted RBP14.13□□□□□ -0.15
PCDHGC3-205ENST00000617641 ABHD12Q8N2K0 398 aa14.13□□□□□ -0.15
PCDHGC3-205ENST00000617641 C8orf31Q8N9H6 132 aa14.13□□□□□ -0.15
PCDHGC3-205ENST00000617641 CLCC1Q96S66 551 aa14.13□□□□□ -0.15
PCDHGC3-205ENST00000617641 PSMG3Q9BT73 122 aaPredicted RBP14.13□□□□□ -0.15
PCDHGC3-205ENST00000617641 TMEM14BQ9NUH8 114 aa14.13□□□□□ -0.15
PCDHGC3-205ENST00000617641 FOXA2Q9Y261 457 aaPredicted RBP14.13□□□□□ -0.15
PCDHGC3-205ENST00000617641 H0YJW9 148 aa14.12□□□□□ -0.15
PCDHGC3-205ENST00000617641 H7C2Y5 167 aa14.12□□□□□ -0.15
PCDHGC3-205ENST00000617641 C19orf84I3L1E1 186 aa14.12□□□□□ -0.15
PCDHGC3-205ENST00000617641 IFNA10P01566 189 aa14.12□□□□□ -0.15
PCDHGC3-205ENST00000617641 HOXA1P49639 335 aaPredicted RBP14.12□□□□□ -0.15
PCDHGC3-205ENST00000617641 PRB3Q04118 309 aaPredicted RBP14.12□□□□□ -0.15
PCDHGC3-205ENST00000617641 OR9G1Q8NH87 305 aa14.12□□□□□ -0.15
PCDHGC3-205ENST00000617641 SEC11CQ9BY50 192 aa14.12□□□□□ -0.15
PCDHGC3-205ENST00000617641 EIF5A2Q9GZV4 153 aaKnown RBP14.12□□□□□ -0.15
PCDHGC3-205ENST00000617641 CARHSP1Q9Y2V2 147 aaKnown RBP14.12□□□□□ -0.15
PCDHGC3-205ENST00000617641 MALRD1Q5VYJ5 2156 aa14.12□□□□□ -0.15
PCDHGC3-205ENST00000617641 A0A087X0M5 115 aa14.12□□□□□ -0.15
PCDHGC3-205ENST00000617641 A0A1B0GX30 115 aa14.12□□□□□ -0.15
PCDHGC3-205ENST00000617641 APOA2P02652 100 aa14.12□□□□□ -0.15
PCDHGC3-205ENST00000617641 GNB2P62879 340 aa14.12□□□□□ -0.15
PCDHGC3-205ENST00000617641 SFT2D1Q8WV19 159 aa14.12□□□□□ -0.15
PCDHGC3-205ENST00000617641 TMEM133Q9H2Q1 129 aa14.12□□□□□ -0.15
PCDHGC3-205ENST00000617641 HIPK2Q9H2X6 1198 aa14.12□□□□□ -0.15
PCDHGC3-205ENST00000617641 RPRMQ9NS64 109 aa14.12□□□□□ -0.15
PCDHGC3-205ENST00000617641 DPPA3Q6W0C5 159 aa14.11□□□□□ -0.15
PCDHGC3-205ENST00000617641 DTX2Q86UW9 622 aa14.11□□□□□ -0.15
PCDHGC3-205ENST00000617641 PUSL1Q8N0Z8 303 aaKnown RBP14.11□□□□□ -0.15
PCDHGC3-205ENST00000617641 LFNGQ8NES3 379 aa14.11□□□□□ -0.15
PCDHGC3-205ENST00000617641 ST6GALNAC6Q969X2 333 aa14.11□□□□□ -0.15
PCDHGC3-205ENST00000617641 RRHO14718 337 aa14.1□□□□□ -0.15
PCDHGC3-205ENST00000617641 FGF7P21781 194 aa14.1□□□□□ -0.15
PCDHGC3-205ENST00000617641 PPT1P50897 306 aa14.1□□□□□ -0.15
PCDHGC3-205ENST00000617641 ELLP55199 621 aaPredicted RBP14.1□□□□□ -0.15
PCDHGC3-205ENST00000617641 HSPE1P61604 102 aaKnown RBP14.1□□□□□ -0.15
PCDHGC3-205ENST00000617641 TLE4Q04727 773 aa14.1□□□□□ -0.15
PCDHGC3-205ENST00000617641 SVBPQ8N300 66 aa14.1□□□□□ -0.15
PCDHGC3-205ENST00000617641 OR8B3Q8NGG8 313 aa14.1□□□□□ -0.15
PCDHGC3-205ENST00000617641 OR5AN1Q8NGI8 311 aa14.1□□□□□ -0.15
PCDHGC3-205ENST00000617641 TMEM186Q96B77 213 aa14.1□□□□□ -0.15
PCDHGC3-205ENST00000617641 OR8B2Q96RD0 313 aa14.1□□□□□ -0.15
PCDHGC3-205ENST00000617641 NABP2Q9BQ15 211 aa14.1□□□□□ -0.15
PCDHGC3-205ENST00000617641 NKX6-2Q9C056 277 aaPredicted RBP14.1□□□□□ -0.15
PCDHGC3-205ENST00000617641 OR51B2Q9Y5P1 312 aa14.1□□□□□ -0.15
PCDHGC3-205ENST00000617641 UPK2O00526 184 aa14.1□□□□□ -0.15
PCDHGC3-205ENST00000617641 LY86O95711 162 aa14.1□□□□□ -0.15
PCDHGC3-205ENST00000617641 IL6RP08887 468 aaPredicted RBP14.1□□□□□ -0.15
PCDHGC3-205ENST00000617641 SAA1P0DJI8 122 aaPredicted RBP14.1□□□□□ -0.15
PCDHGC3-205ENST00000617641 AGAP20933 346 aa14.1□□□□□ -0.15
PCDHGC3-205ENST00000617641 PEA15Q15121 130 aa14.1□□□□□ -0.15
PCDHGC3-205ENST00000617641 WDR25Q64LD2 544 aaPredicted RBP14.1□□□□□ -0.15
PCDHGC3-205ENST00000617641 ZNF600Q6ZNG1 722 aa14.1□□□□□ -0.15
PCDHGC3-205ENST00000617641 NEU4Q8WWR8 484 aaPredicted RBP14.1□□□□□ -0.15
PCDHGC3-205ENST00000617641 NEIL1Q96FI4 390 aaPredicted RBP14.1□□□□□ -0.15
PCDHGC3-205ENST00000617641 HARBI1Q96MB7 349 aa14.1□□□□□ -0.15
PCDHGC3-205ENST00000617641 MIOXQ9UGB7 285 aa14.1□□□□□ -0.15
PCDHGC3-205ENST00000617641 PPIAL4CA0A0B4J2A2 164 aa14.09□□□□□ -0.15
PCDHGC3-205ENST00000617641 PPIAL4GP0DN37 164 aa14.09□□□□□ -0.15
PCDHGC3-205ENST00000617641 RPP30P78346 268 aaKnown RBP14.09□□□□□ -0.15
PCDHGC3-205ENST00000617641 SERF2P84101 59 aa14.09□□□□□ -0.15
PCDHGC3-205ENST00000617641 VWC2Q2TAL6 325 aa14.09□□□□□ -0.15
PCDHGC3-205ENST00000617641 SP5Q6BEB4 398 aaPredicted RBP14.09□□□□□ -0.15
PCDHGC3-205ENST00000617641 FAM71F2Q6NXP2 309 aa14.09□□□□□ -0.15
PCDHGC3-205ENST00000617641 TMEM170AQ8WVE7 144 aa14.09□□□□□ -0.15
PCDHGC3-205ENST00000617641 RAB1CQ92928 201 aa14.09□□□□□ -0.15
PCDHGC3-205ENST00000617641 TIMD4Q96H15 378 aa14.09□□□□□ -0.15
PCDHGC3-205ENST00000617641 HINT2Q9BX68 163 aa14.09□□□□□ -0.15
PCDHGC3-205ENST00000617641 NUPL2O15504 423 aaKnown RBP14.09□□□□□ -0.15
PCDHGC3-205ENST00000617641 ZNF137PP52743 207 aa14.09□□□□□ -0.15
PCDHGC3-205ENST00000617641 ZNF726P1Q15940 193 aa14.09□□□□□ -0.15
PCDHGC3-205ENST00000617641 ETV3LQ6ZN32 361 aa14.09□□□□□ -0.15
PCDHGC3-205ENST00000617641 OSR1Q8TAX0 266 aaPredicted RBP14.09□□□□□ -0.15
PCDHGC3-205ENST00000617641 RARRES2Q99969 163 aa14.09□□□□□ -0.15
PCDHGC3-205ENST00000617641 PBDC1Q9BVG4 233 aa14.09□□□□□ -0.15
PCDHGC3-205ENST00000617641 UBTD1Q9HAC8 227 aa14.09□□□□□ -0.15
PCDHGC3-205ENST00000617641 PRNDQ9UKY0 176 aa14.09□□□□□ -0.15
PCDHGC3-205ENST00000617641 OPN1MWP04001 364 aa14.08□□□□□ -0.16
PCDHGC3-205ENST00000617641 OPN1MW2P0DN77 364 aa14.08□□□□□ -0.16
PCDHGC3-205ENST00000617641 OPN1MW3P0DN78 364 aa14.08□□□□□ -0.16
PCDHGC3-205ENST00000617641 CDKN1AP38936 164 aa14.08□□□□□ -0.16
PCDHGC3-205ENST00000617641 PLA2G5P39877 138 aa14.08□□□□□ -0.16
PCDHGC3-205ENST00000617641 SSX7Q7RTT5 188 aa14.08□□□□□ -0.16
PCDHGC3-205ENST00000617641 TGIF2LXQ8IUE1 241 aa14.08□□□□□ -0.16
PCDHGC3-205ENST00000617641 FAM122AQ96E09 287 aa14.08□□□□□ -0.16
PCDHGC3-205ENST00000617641 TIMM9Q9Y5J7 89 aa14.08□□□□□ -0.16
PCDHGC3-205ENST00000617641 IGHV2-26A0A0B4J1V2 119 aa14.08□□□□□ -0.16
PCDHGC3-205ENST00000617641 TMEM41BQ5BJD5 291 aa14.08□□□□□ -0.16
PCDHGC3-205ENST00000617641 FLYWCH2Q96CP2 140 aaKnown RBP14.08□□□□□ -0.16
PCDHGC3-205ENST00000617641 BET1LQ9NYM9 111 aa14.08□□□□□ -0.16
PCDHGC3-205ENST00000617641 BTBD17A6NE02 478 aa14.07□□□□□ -0.16
PCDHGC3-205ENST00000617641 KBTBD11O94819 623 aa14.07□□□□□ -0.16
PCDHGC3-205ENST00000617641 TMEM177Q53S58 311 aa14.07□□□□□ -0.16
PCDHGC3-205ENST00000617641 ACSM6Q6P461 480 aa14.07□□□□□ -0.16
PCDHGC3-205ENST00000617641 CENPVQ7Z7K6 275 aaPredicted RBP14.07□□□□□ -0.16
PCDHGC3-205ENST00000617641 C8orf46Q8TAG6 207 aa14.07□□□□□ -0.16
PCDHGC3-205ENST00000617641 LHX4Q969G2 390 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 286.7 ms