RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 TMEM230Q96A57 120 aa11.77□□□□□ -0.53
UBXN1-218ENST00000616865 RBMXL1Q96E39 390 aaKnown RBP11.77□□□□□ -0.53
UBXN1-218ENST00000616865 TP53RKQ96S44 253 aa11.77□□□□□ -0.53
UBXN1-218ENST00000616865 CITED2Q99967 270 aaPredicted RBP11.77□□□□□ -0.53
UBXN1-218ENST00000616865 RASL11BQ9BPW5 248 aa11.77□□□□□ -0.53
UBXN1-218ENST00000616865 PLEKHA2Q9HB19 425 aa11.77□□□□□ -0.53
UBXN1-218ENST00000616865 FAM212BQ9NTI7 297 aaPredicted RBP11.77□□□□□ -0.53
UBXN1-218ENST00000616865 COMMD9Q9P000 198 aa11.77□□□□□ -0.53
UBXN1-218ENST00000616865 INMT-MINDY4F8WBC2 141 aa11.76□□□□□ -0.53
UBXN1-218ENST00000616865 M0QZK8 103 aa11.76□□□□□ -0.53
UBXN1-218ENST00000616865 S1PR2O95136 353 aa11.76□□□□□ -0.53
UBXN1-218ENST00000616865 DHFRP00374 187 aa11.76□□□□□ -0.53
UBXN1-218ENST00000616865 OR4E1P0C645 316 aa11.76□□□□□ -0.53
UBXN1-218ENST00000616865 RPA2P15927 270 aa11.76□□□□□ -0.53
UBXN1-218ENST00000616865 NQO2P16083 231 aa11.76□□□□□ -0.53
UBXN1-218ENST00000616865 SRPXP78539 464 aa11.76□□□□□ -0.53
UBXN1-218ENST00000616865 PPP1R1AQ13522 171 aa11.76□□□□□ -0.53
UBXN1-218ENST00000616865 ARSJQ5FYB0 599 aaPredicted RBP11.76□□□□□ -0.53
UBXN1-218ENST00000616865 CCBE1Q6UXH8 406 aaPredicted RBP11.76□□□□□ -0.53
UBXN1-218ENST00000616865 ZNF695Q8IW36 515 aa11.76□□□□□ -0.53
UBXN1-218ENST00000616865 WNT10AQ9GZT5 417 aa11.76□□□□□ -0.53
UBXN1-218ENST00000616865 TMEM222Q9H0R3 208 aa11.76□□□□□ -0.53
UBXN1-218ENST00000616865 PIGBOS1A0A0B4J2F0 54 aa11.75□□□□□ -0.53
UBXN1-218ENST00000616865 RRHO14718 337 aa11.75□□□□□ -0.53
UBXN1-218ENST00000616865 SLC25A17O43808 307 aa11.75□□□□□ -0.53
UBXN1-218ENST00000616865 SPDEFO95238 335 aa11.75□□□□□ -0.53
UBXN1-218ENST00000616865 SFT2D2O95562 160 aa11.75□□□□□ -0.53
UBXN1-218ENST00000616865 HLA-AP01891 365 aaKnown RBP11.75□□□□□ -0.53
UBXN1-218ENST00000616865 CNTFRP26992 372 aa11.75□□□□□ -0.53
UBXN1-218ENST00000616865 F2RL1P55085 397 aa11.75□□□□□ -0.53
UBXN1-218ENST00000616865 PSG5Q15238 335 aa11.75□□□□□ -0.53
UBXN1-218ENST00000616865 SSX9Q7RTT3 188 aa11.75□□□□□ -0.53
UBXN1-218ENST00000616865 LYG2Q86SG7 212 aa11.75□□□□□ -0.53
UBXN1-218ENST00000616865 Q8N6K4 173 aa11.75□□□□□ -0.53
UBXN1-218ENST00000616865 VSTM2AQ8TAG5 236 aa11.75□□□□□ -0.53
UBXN1-218ENST00000616865 GALNT14Q96FL9 552 aa11.75□□□□□ -0.53
UBXN1-218ENST00000616865 RITA1Q96K30 269 aa11.75□□□□□ -0.53
UBXN1-218ENST00000616865 GPN1Q9HCN4 374 aaPredicted RBP11.75□□□□□ -0.53
UBXN1-218ENST00000616865 METTL1Q9UBP6 276 aaKnown RBP11.75□□□□□ -0.53
UBXN1-218ENST00000616865 C9orf170A2RU37 121 aa11.74□□□□□ -0.53
UBXN1-218ENST00000616865 FGF16O43320 207 aa11.74□□□□□ -0.53
UBXN1-218ENST00000616865 KRASP01116 189 aa11.74□□□□□ -0.53
UBXN1-218ENST00000616865 SPNP16150 400 aa11.74□□□□□ -0.53
UBXN1-218ENST00000616865 UCP1P25874 307 aa11.74□□□□□ -0.53
UBXN1-218ENST00000616865 AKR1C2P52895 323 aa11.74□□□□□ -0.53
UBXN1-218ENST00000616865 BRWD1-AS2P59051 145 aa11.74□□□□□ -0.53
UBXN1-218ENST00000616865 ZNF585BQ52M93 769 aa11.74□□□□□ -0.53
UBXN1-218ENST00000616865 C9orf152Q5JTZ5 239 aa11.74□□□□□ -0.53
UBXN1-218ENST00000616865 TMEM268Q5VZI3 342 aa11.74□□□□□ -0.53
UBXN1-218ENST00000616865 LGI3Q8N145 548 aa11.74□□□□□ -0.53
UBXN1-218ENST00000616865 NPBQ8NG41 125 aa11.74□□□□□ -0.53
UBXN1-218ENST00000616865 COQ8AQ8NI60 647 aa11.74□□□□□ -0.53
UBXN1-218ENST00000616865 RRNAD1Q96FB5 475 aaKnown RBP11.74□□□□□ -0.53
UBXN1-218ENST00000616865 RHOVQ96L33 236 aa11.74□□□□□ -0.53
UBXN1-218ENST00000616865 PRSS22Q9GZN4 317 aa11.74□□□□□ -0.53
UBXN1-218ENST00000616865 ALX4Q9H161 411 aaPredicted RBP11.74□□□□□ -0.53
UBXN1-218ENST00000616865 FBXL15Q9H469 300 aa11.74□□□□□ -0.53
UBXN1-218ENST00000616865 CREBL2O60519 120 aaPredicted RBP11.73□□□□□ -0.53
UBXN1-218ENST00000616865 PRAF2O60831 178 aa11.73□□□□□ -0.53
UBXN1-218ENST00000616865 CD33P20138 364 aa11.73□□□□□ -0.53
UBXN1-218ENST00000616865 G6PCP35575 357 aa11.73□□□□□ -0.53
UBXN1-218ENST00000616865 UBE2KP61086 200 aa11.73□□□□□ -0.53
UBXN1-218ENST00000616865 SUPT4H1P63272 117 aaKnown RBP11.73□□□□□ -0.53
UBXN1-218ENST00000616865 DHRS2Q13268 280 aa11.73□□□□□ -0.53
UBXN1-218ENST00000616865 TMEM187Q14656 261 aa11.73□□□□□ -0.53
UBXN1-218ENST00000616865 C5orf64Q2M2E5 130 aa11.73□□□□□ -0.53
UBXN1-218ENST00000616865 H2BFWTQ7Z2G1 175 aa11.73□□□□□ -0.53
UBXN1-218ENST00000616865 VKORC1L1Q8N0U8 176 aa11.73□□□□□ -0.53
UBXN1-218ENST00000616865 TEX45Q8NA69 505 aa11.73□□□□□ -0.53
UBXN1-218ENST00000616865 GLYATL2Q8WU03 294 aa11.73□□□□□ -0.53
UBXN1-218ENST00000616865 RBPMSQ93062 196 aaKnown RBP11.73□□□□□ -0.53
UBXN1-218ENST00000616865 CLCC1Q96S66 551 aa11.73□□□□□ -0.53
UBXN1-218ENST00000616865 MARVELD1Q9BSK0 173 aa11.73□□□□□ -0.53
UBXN1-218ENST00000616865 PRR13Q9NZ81 148 aa11.73□□□□□ -0.53
UBXN1-218ENST00000616865 DNAH9Q9NYC9 4486 aa11.73□□□□□ -0.53
UBXN1-218ENST00000616865 NOTCH3Q9UM47 2321 aa11.72□□□□□ -0.53
UBXN1-218ENST00000616865 MARCH11A6NNE9 402 aa11.72□□□□□ -0.53
UBXN1-218ENST00000616865 SRRM4A7MD48 611 aaKnown RBP11.72□□□□□ -0.53
UBXN1-218ENST00000616865 SNAPC5O75971 98 aa11.72□□□□□ -0.53
UBXN1-218ENST00000616865 ACTL6BO94805 426 aa11.72□□□□□ -0.53
UBXN1-218ENST00000616865 OR2A4O95047 310 aa11.72□□□□□ -0.53
UBXN1-218ENST00000616865 NDUFA3O95167 84 aa11.72□□□□□ -0.53
UBXN1-218ENST00000616865 IL5P05113 134 aa11.72□□□□□ -0.53
UBXN1-218ENST00000616865 SAA1P0DJI8 122 aaPredicted RBP11.72□□□□□ -0.53
UBXN1-218ENST00000616865 IGLL1P15814 213 aa11.72□□□□□ -0.53
UBXN1-218ENST00000616865 TMEM95Q3KNT9 176 aa11.72□□□□□ -0.53
UBXN1-218ENST00000616865 LIN54Q6MZP7 749 aa11.72□□□□□ -0.53
UBXN1-218ENST00000616865 Q6ZS46 218 aa11.72□□□□□ -0.53
UBXN1-218ENST00000616865 SELENOHQ8IZQ5 122 aaKnown RBP11.72□□□□□ -0.53
UBXN1-218ENST00000616865 C5orf56Q8N8D9 126 aa11.72□□□□□ -0.53
UBXN1-218ENST00000616865 Q8N9W7 124 aa11.72□□□□□ -0.53
UBXN1-218ENST00000616865 MINDY2Q8NBR6 621 aa11.72□□□□□ -0.53
UBXN1-218ENST00000616865 UXS1Q8NBZ7 420 aa11.72□□□□□ -0.53
UBXN1-218ENST00000616865 IL22RA2Q969J5 263 aa11.72□□□□□ -0.53
UBXN1-218ENST00000616865 OR2A7Q96R45 310 aa11.72□□□□□ -0.53
UBXN1-218ENST00000616865 PHB2Q99623 299 aa11.72□□□□□ -0.53
UBXN1-218ENST00000616865 SEC22CQ9BRL7 303 aa11.72□□□□□ -0.53
UBXN1-218ENST00000616865 PLSCR3Q9NRY6 295 aa11.72□□□□□ -0.53
UBXN1-218ENST00000616865 RBMXL2O75526 392 aaKnown RBP11.71□□□□□ -0.53
UBXN1-218ENST00000616865 CNIH1O95406 144 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms