RNA–Protein interactions for RNA: ENST00000615517.4

MUC1-227, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 951 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-227ENST00000615517 GTF2A1P52655 376 aaPredicted RBP4.82□□□□□ -1.64
MUC1-227ENST00000615517 HAMPP81172 84 aa4.82□□□□□ -1.64
MUC1-227ENST00000615517 TMEM41BQ5BJD5 291 aa4.82□□□□□ -1.64
MUC1-227ENST00000615517 LIPKQ5VXJ0 399 aa4.82□□□□□ -1.64
MUC1-227ENST00000615517 TMEM88Q6PEY1 159 aa4.82□□□□□ -1.64
MUC1-227ENST00000615517 ZNF66Q6ZN08 573 aa4.82□□□□□ -1.64
MUC1-227ENST00000615517 C6orf201Q7Z4U5 140 aa4.82□□□□□ -1.64
MUC1-227ENST00000615517 LHFPL3Q86UP9 236 aa4.82□□□□□ -1.64
MUC1-227ENST00000615517 STHQ8IWL8 128 aa4.82□□□□□ -1.64
MUC1-227ENST00000615517 MMD2Q8IY49 270 aa4.82□□□□□ -1.64
MUC1-227ENST00000615517 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.82□□□□□ -1.64
MUC1-227ENST00000615517 GIMAP1Q8WWP7 306 aa4.82□□□□□ -1.64
MUC1-227ENST00000615517 CXorf58Q96LI9 332 aa4.82□□□□□ -1.64
MUC1-227ENST00000615517 HDHD3Q9BSH5 251 aaPredicted RBP4.82□□□□□ -1.64
MUC1-227ENST00000615517 C20orf24Q9BUV8 137 aa4.82□□□□□ -1.64
MUC1-227ENST00000615517 RHPN1-AS1Q9BWJ2 59 aa4.82□□□□□ -1.64
MUC1-227ENST00000615517 TMEM14BQ9NUH8 114 aa4.82□□□□□ -1.64
MUC1-227ENST00000615517 RDH8Q9NYR8 311 aa4.82□□□□□ -1.64
MUC1-227ENST00000615517 AASSQ9UDR5 926 aa4.82□□□□□ -1.64
MUC1-227ENST00000615517 TMED3Q9Y3Q3 217 aa4.82□□□□□ -1.64
MUC1-227ENST00000615517 TRAV8-7A0A075B6U6 113 aa4.81□□□□□ -1.64
MUC1-227ENST00000615517 IGHV7-4-1A0A0J9YVY3 117 aa4.81□□□□□ -1.64
MUC1-227ENST00000615517 DPPA5A6NC42 116 aa4.81□□□□□ -1.64
MUC1-227ENST00000615517 OR2T8A6NH00 312 aa4.81□□□□□ -1.64
MUC1-227ENST00000615517 FAM229AH3BQW9 127 aa4.81□□□□□ -1.64
MUC1-227ENST00000615517 NDUFA4O00483 81 aa4.81□□□□□ -1.64
MUC1-227ENST00000615517 SPP1P10451 314 aa4.81□□□□□ -1.64
MUC1-227ENST00000615517 HTN3P15516 51 aa4.81□□□□□ -1.64
MUC1-227ENST00000615517 HIST1H1BP16401 226 aaKnown RBP4.81□□□□□ -1.64
MUC1-227ENST00000615517 PTBP1P26599 531 aaKnown RBP eCLIP4.81□□□□□ -1.64
MUC1-227ENST00000615517 RPL27AP46776 148 aaKnown RBP4.81□□□□□ -1.64
MUC1-227ENST00000615517 MNAT1P51948 309 aa4.81□□□□□ -1.64
MUC1-227ENST00000615517 PPP3R1P63098 170 aa4.81□□□□□ -1.64
MUC1-227ENST00000615517 HLA-DRB3P79483 266 aa4.81□□□□□ -1.64
MUC1-227ENST00000615517 DLK1P80370 383 aa4.81□□□□□ -1.64
MUC1-227ENST00000615517 CBX3Q13185 183 aa4.81□□□□□ -1.64
MUC1-227ENST00000615517 RTL8BQ17RB0 113 aa4.81□□□□□ -1.64
MUC1-227ENST00000615517 AWAT2Q6E213 333 aa4.81□□□□□ -1.64
MUC1-227ENST00000615517 VKORC1L1Q8N0U8 176 aa4.81□□□□□ -1.64
MUC1-227ENST00000615517 ACBD7Q8N6N7 88 aa4.81□□□□□ -1.64
MUC1-227ENST00000615517 GPR148Q8TDV2 347 aa4.81□□□□□ -1.64
MUC1-227ENST00000615517 NEDD4LQ96PU5 975 aa4.81□□□□□ -1.64
MUC1-227ENST00000615517 OR2A7Q96R45 310 aa4.81□□□□□ -1.64
MUC1-227ENST00000615517 THTPAQ9BU02 230 aa4.81□□□□□ -1.64
MUC1-227ENST00000615517 OR2D2Q9H210 308 aa4.81□□□□□ -1.64
MUC1-227ENST00000615517 CHMP1AQ9HD42 196 aaPredicted RBP4.81□□□□□ -1.64
MUC1-227ENST00000615517 IGHV3OR16-13A0A075B7E8 117 aa4.8□□□□□ -1.64
MUC1-227ENST00000615517 TRBV6-6A0A0A6YYG2 114 aa4.8□□□□□ -1.64
MUC1-227ENST00000615517 IGHV3-74A0A0B4J1X5 117 aa4.8□□□□□ -1.64
MUC1-227ENST00000615517 KNCNA6PVL3 124 aa4.8□□□□□ -1.64
MUC1-227ENST00000615517 EREGO14944 169 aa4.8□□□□□ -1.64
MUC1-227ENST00000615517 DFFBO76075 338 aa4.8□□□□□ -1.64
MUC1-227ENST00000615517 CD2P06729 351 aa4.8□□□□□ -1.64
MUC1-227ENST00000615517 CD3GP09693 182 aa4.8□□□□□ -1.64
MUC1-227ENST00000615517 SPART-AS1P0CW21 52 aa4.8□□□□□ -1.64
MUC1-227ENST00000615517 RRASP10301 218 aa4.8□□□□□ -1.64
MUC1-227ENST00000615517 DUTP33316 252 aaKnown RBP4.8□□□□□ -1.64
MUC1-227ENST00000615517 ICAM4Q14773 271 aa4.8□□□□□ -1.64
MUC1-227ENST00000615517 XAF1Q6GPH4 301 aa4.8□□□□□ -1.64
MUC1-227ENST00000615517 SYS1Q8N2H4 156 aa4.8□□□□□ -1.64
MUC1-227ENST00000615517 LILRB2Q8N423 598 aa4.8□□□□□ -1.64
MUC1-227ENST00000615517 JAGN1Q8N5M9 183 aa4.8□□□□□ -1.64
MUC1-227ENST00000615517 TMEM116Q8NCL8 245 aa4.8□□□□□ -1.64
MUC1-227ENST00000615517 OR6M1Q8NGM8 313 aa4.8□□□□□ -1.64
MUC1-227ENST00000615517 OR8J1Q8NGP2 316 aa4.8□□□□□ -1.64
MUC1-227ENST00000615517 OSR1Q8TAX0 266 aaPredicted RBP4.8□□□□□ -1.64
MUC1-227ENST00000615517 RFKQ969G6 155 aa4.8□□□□□ -1.64
MUC1-227ENST00000615517 NRBF2Q96F24 287 aa4.8□□□□□ -1.64
MUC1-227ENST00000615517 ATG101Q9BSB4 218 aa4.8□□□□□ -1.64
MUC1-227ENST00000615517 MS4A6AQ9H2W1 248 aa4.8□□□□□ -1.64
MUC1-227ENST00000615517 EXOGQ9Y2C4 368 aaKnown RBP4.8□□□□□ -1.64
MUC1-227ENST00000615517 LINC00588Q9Y4M8 146 aa4.8□□□□□ -1.64
MUC1-227ENST00000615517 C15orf62A8K5M9 175 aa4.79□□□□□ -1.64
MUC1-227ENST00000615517 B2RBV5 119 aa4.79□□□□□ -1.64
MUC1-227ENST00000615517 CREBL2O60519 120 aaPredicted RBP4.79□□□□□ -1.64
MUC1-227ENST00000615517 DHFRP00374 187 aa4.79□□□□□ -1.64
MUC1-227ENST00000615517 DEFA4P12838 97 aa4.79□□□□□ -1.64
MUC1-227ENST00000615517 HTR2CP28335 458 aa4.79□□□□□ -1.64
MUC1-227ENST00000615517 MAS1LP35410 378 aa4.79□□□□□ -1.64
MUC1-227ENST00000615517 PSMD7P51665 324 aa4.79□□□□□ -1.64
MUC1-227ENST00000615517 EMP1P54849 157 aa4.79□□□□□ -1.64
MUC1-227ENST00000615517 KDM4DQ6B0I6 523 aa4.79□□□□□ -1.64
MUC1-227ENST00000615517 OR10K2Q6IF99 312 aa4.79□□□□□ -1.64
MUC1-227ENST00000615517 MOB1BQ7L9L4 216 aa4.79□□□□□ -1.64
MUC1-227ENST00000615517 TCF24Q7RTU0 167 aa4.79□□□□□ -1.64
MUC1-227ENST00000615517 PUSL1Q8N0Z8 303 aaKnown RBP4.79□□□□□ -1.64
MUC1-227ENST00000615517 ANAPC16Q96DE5 110 aa4.79□□□□□ -1.64
MUC1-227ENST00000615517 LGALS12Q96DT0 336 aa4.79□□□□□ -1.64
MUC1-227ENST00000615517 BSCL2Q96G97 398 aaPredicted RBP4.79□□□□□ -1.64
MUC1-227ENST00000615517 SRSF8Q9BRL6 282 aaKnown RBP4.79□□□□□ -1.64
MUC1-227ENST00000615517 NIPSNAP3BQ9BS92 247 aa4.79□□□□□ -1.64
MUC1-227ENST00000615517 OR51E2Q9H255 320 aa4.79□□□□□ -1.64
MUC1-227ENST00000615517 Q9N2K0 584 aa4.79□□□□□ -1.64
MUC1-227ENST00000615517 SMPD3Q9NY59 655 aaPredicted RBP4.79□□□□□ -1.64
MUC1-227ENST00000615517 DKK2Q9UBU2 259 aa4.79□□□□□ -1.64
MUC1-227ENST00000615517 TAGLN3Q9UI15 199 aa4.79□□□□□ -1.64
MUC1-227ENST00000615517 AK3Q9UIJ7 227 aa4.79□□□□□ -1.64
MUC1-227ENST00000615517 A0A0A6YYD4 124 aa4.78□□□□□ -1.64
MUC1-227ENST00000615517 IGHV3-21A0A0B4J1V1 117 aa4.78□□□□□ -1.64
MUC1-227ENST00000615517 TRBV5-5A0A0J9YX44 114 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms