RNA–Protein interactions for RNA: ENST00000615216.4

CHD9-221, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 10,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-221ENST00000615216 TMEM14DPA8MWL7 114 aa3.91□□□□□ -1.78
CHD9-221ENST00000615216 STPG1Q5TH74 334 aa3.91□□□□□ -1.78
CHD9-221ENST00000615216 ZNF385CQ66K41 422 aaPredicted RBP3.91□□□□□ -1.78
CHD9-221ENST00000615216 Q6AWC8 147 aa3.91□□□□□ -1.78
CHD9-221ENST00000615216 ZNF818PQ6ZRF7 136 aa3.91□□□□□ -1.78
CHD9-221ENST00000615216 WFIKKN1Q96NZ8 548 aa3.91□□□□□ -1.78
CHD9-221ENST00000615216 GPR82Q96P67 336 aa3.91□□□□□ -1.78
CHD9-221ENST00000615216 C2orf88Q9BSF0 95 aa3.91□□□□□ -1.78
CHD9-221ENST00000615216 A0A087WWC5 75 aa3.91□□□□□ -1.78
CHD9-221ENST00000615216 A0A1W2PQM1 296 aa3.91□□□□□ -1.78
CHD9-221ENST00000615216 UNQ5815/PRO19632Q6UWF5 114 aa3.91□□□□□ -1.78
CHD9-221ENST00000615216 DNASE2BQ8WZ79 361 aa3.91□□□□□ -1.78
CHD9-221ENST00000615216 SGK494Q96LW2 274 aa3.91□□□□□ -1.78
CHD9-221ENST00000615216 VCX2Q9H322 139 aa3.91□□□□□ -1.78
CHD9-221ENST00000615216 AURKAIP1Q9NWT8 199 aaPredicted RBP3.91□□□□□ -1.78
CHD9-221ENST00000615216 PLXNA2O75051 1894 aa3.91□□□□□ -1.78
CHD9-221ENST00000615216 NUP210Q8TEM1 1887 aaPredicted RBP3.91□□□□□ -1.78
CHD9-221ENST00000615216 RLFQ13129 1914 aa3.9□□□□□ -1.78
CHD9-221ENST00000615216 SCGB1A1P11684 91 aa3.9□□□□□ -1.78
CHD9-221ENST00000615216 LCN2P80188 198 aa3.9□□□□□ -1.78
CHD9-221ENST00000615216 DNM1P46Q6ZS02 220 aa3.9□□□□□ -1.78
CHD9-221ENST00000615216 DDB2Q92466 427 aa3.9□□□□□ -1.78
CHD9-221ENST00000615216 SH3BGRL3Q9H299 93 aa3.9□□□□□ -1.78
CHD9-221ENST00000615216 HILPDAQ9Y5L2 63 aa3.9□□□□□ -1.78
CHD9-221ENST00000615216 TANC1Q9C0D5 1861 aa3.9□□□□□ -1.78
CHD9-221ENST00000615216 IGKV1D-42A0A075B6H8 117 aa3.9□□□□□ -1.78
CHD9-221ENST00000615216 IGHV3-21A0A0B4J1V1 117 aa3.9□□□□□ -1.78
CHD9-221ENST00000615216 TRAV39A0A0B4J263 110 aa3.9□□□□□ -1.78
CHD9-221ENST00000615216 GREM1O60565 184 aa3.9□□□□□ -1.78
CHD9-221ENST00000615216 GCHFRP30047 84 aa3.9□□□□□ -1.78
CHD9-221ENST00000615216 CCL8P80075 99 aa3.9□□□□□ -1.78
CHD9-221ENST00000615216 PCOLCEQ15113 449 aa3.9□□□□□ -1.78
CHD9-221ENST00000615216 PRSS8Q16651 343 aa3.9□□□□□ -1.78
CHD9-221ENST00000615216 WFDC3Q8IUB2 231 aa3.9□□□□□ -1.78
CHD9-221ENST00000615216 LMX1BO60663 402 aa3.9□□□□□ -1.78
CHD9-221ENST00000615216 IFITM3Q01628 133 aa3.9□□□□□ -1.78
CHD9-221ENST00000615216 CXorf66Q5JRM2 361 aaPredicted RBP3.9□□□□□ -1.78
CHD9-221ENST00000615216 TCF23Q7RTU1 214 aa3.9□□□□□ -1.78
CHD9-221ENST00000615216 NPCDR1Q9BY65 106 aa3.9□□□□□ -1.78
CHD9-221ENST00000615216 KIAA2026Q5HYC2 2103 aa3.9□□□□□ -1.78
CHD9-221ENST00000615216 SLC25A17O43808 307 aa3.9□□□□□ -1.78
CHD9-221ENST00000615216 ZNF883P0CG24 379 aa3.9□□□□□ -1.78
CHD9-221ENST00000615216 RND2P52198 227 aa3.9□□□□□ -1.78
CHD9-221ENST00000615216 H2BFSP57053 126 aa3.9□□□□□ -1.78
CHD9-221ENST00000615216 SMUG1Q53HV7 270 aa3.9□□□□□ -1.78
CHD9-221ENST00000615216 Q6ZT83 130 aa3.9□□□□□ -1.78
CHD9-221ENST00000615216 TCF19Q9Y242 345 aa3.9□□□□□ -1.78
CHD9-221ENST00000615216 CARHSP1Q9Y2V2 147 aaKnown RBP3.9□□□□□ -1.78
CHD9-221ENST00000615216 DNAJC13O75165 2243 aa3.9□□□□□ -1.78
CHD9-221ENST00000615216 PPIAL4CA0A0B4J2A2 164 aa3.9□□□□□ -1.79
CHD9-221ENST00000615216 PPIAL4GP0DN37 164 aa3.9□□□□□ -1.79
CHD9-221ENST00000615216 FCGR2BP31994 310 aaPredicted RBP3.9□□□□□ -1.79
CHD9-221ENST00000615216 GPX4P36969 197 aaPredicted RBP3.9□□□□□ -1.79
CHD9-221ENST00000615216 ACP7Q6ZNF0 438 aa3.9□□□□□ -1.79
CHD9-221ENST00000615216 CYP2G1PQ6ZSU1 146 aa3.9□□□□□ -1.79
CHD9-221ENST00000615216 PUSL1Q8N0Z8 303 aaKnown RBP3.9□□□□□ -1.79
CHD9-221ENST00000615216 KCNS1Q96KK3 526 aa3.9□□□□□ -1.79
CHD9-221ENST00000615216 MRPS18CQ9Y3D5 142 aaKnown RBP3.9□□□□□ -1.79
CHD9-221ENST00000615216 F12P00748 615 aaPredicted RBP3.9□□□□□ -1.79
CHD9-221ENST00000615216 SMIM13P0DJ93 91 aa3.9□□□□□ -1.79
CHD9-221ENST00000615216 SRIP30626 198 aa3.9□□□□□ -1.79
CHD9-221ENST00000615216 PRSS53Q2L4Q9 553 aa3.9□□□□□ -1.79
CHD9-221ENST00000615216 HCP5Q6MZN7 132 aa3.9□□□□□ -1.79
CHD9-221ENST00000615216 RARRES2Q99969 163 aa3.9□□□□□ -1.79
CHD9-221ENST00000615216 PARLQ9H300 379 aa3.9□□□□□ -1.79
CHD9-221ENST00000615216 SPAARA0A1B0GVQ0 90 aa3.9□□□□□ -1.79
CHD9-221ENST00000615216 NPFFO15130 113 aa3.9□□□□□ -1.79
CHD9-221ENST00000615216 GDF9O60383 454 aa3.9□□□□□ -1.79
CHD9-221ENST00000615216 FOXH1O75593 365 aa3.9□□□□□ -1.79
CHD9-221ENST00000615216 GPX1P07203 203 aa3.9□□□□□ -1.79
CHD9-221ENST00000615216 UQCRFS1P47985 274 aa3.9□□□□□ -1.79
CHD9-221ENST00000615216 CENPWQ5EE01 88 aa3.9□□□□□ -1.79
CHD9-221ENST00000615216 TMEM131Q92545 1883 aa3.9□□□□□ -1.79
CHD9-221ENST00000615216 PGPA6NDG6 321 aa3.9□□□□□ -1.79
CHD9-221ENST00000615216 CELA2AP08217 269 aa3.9□□□□□ -1.79
CHD9-221ENST00000615216 STAG3L3P0CL85 134 aa3.9□□□□□ -1.79
CHD9-221ENST00000615216 PAX1P15863 534 aa3.9□□□□□ -1.79
CHD9-221ENST00000615216 C2orf83Q53S99 150 aa3.9□□□□□ -1.79
CHD9-221ENST00000615216 DUX5Q96PT3 197 aa3.9□□□□□ -1.79
CHD9-221ENST00000615216 PLXNA4Q9HCM2 1894 aa3.9□□□□□ -1.79
CHD9-221ENST00000615216 NCKAP5O14513 1909 aa3.9□□□□□ -1.79
CHD9-221ENST00000615216 GCM2O75603 506 aaPredicted RBP3.9□□□□□ -1.79
CHD9-221ENST00000615216 SLC25A53Q5H9E4 307 aa3.9□□□□□ -1.79
CHD9-221ENST00000615216 ABHD12Q8N2K0 398 aa3.9□□□□□ -1.79
CHD9-221ENST00000615216 OSR1Q8TAX0 266 aaPredicted RBP3.9□□□□□ -1.79
CHD9-221ENST00000615216 PHF3Q92576 2039 aaKnown RBP3.89□□□□□ -1.79
CHD9-221ENST00000615216 LOC107984156A0A0G2JMH3 177 aa3.89□□□□□ -1.79
CHD9-221ENST00000615216 KLF4O43474 513 aa3.89□□□□□ -1.79
CHD9-221ENST00000615216 IGKV3-11P04433 115 aa3.89□□□□□ -1.79
CHD9-221ENST00000615216 PF4V1P10720 104 aa3.89□□□□□ -1.79
CHD9-221ENST00000615216 ARL17AQ8IVW1 177 aa3.89□□□□□ -1.79
CHD9-221ENST00000615216 SLC25A45Q8N413 288 aa3.89□□□□□ -1.79
CHD9-221ENST00000615216 CLDND2Q8NHS1 167 aa3.89□□□□□ -1.79
CHD9-221ENST00000615216 RNASEH2CQ8TDP1 164 aaKnown RBP3.89□□□□□ -1.79
CHD9-221ENST00000615216 GATAD1Q8WUU5 269 aa3.89□□□□□ -1.79
CHD9-221ENST00000615216 CHODLQ9H9P2 273 aa3.89□□□□□ -1.79
CHD9-221ENST00000615216 IGHV1-69-2A0A0G2JMI3 117 aa3.89□□□□□ -1.79
CHD9-221ENST00000615216 C2orf68Q2NKX9 166 aa3.89□□□□□ -1.79
CHD9-221ENST00000615216 OR4D5Q8NGN0 318 aa3.89□□□□□ -1.79
CHD9-221ENST00000615216 ZNF414Q96IQ9 312 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms