RNA–Protein interactions for RNA: ENST00000613122.4

CTDP1-208, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTDP1, Length 5,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-208ENST00000613122 FAM159AQ6UWV7 190 aa17.1■□□□□ 0.33
CTDP1-208ENST00000613122 FBXL7Q9UJT9 491 aa17.1■□□□□ 0.33
CTDP1-208ENST00000613122 MOSP00540 346 aa17.09■□□□□ 0.33
CTDP1-208ENST00000613122 DLX6P56179 175 aa17.09■□□□□ 0.33
CTDP1-208ENST00000613122 FAM90A1Q86YD7 464 aa17.09■□□□□ 0.33
CTDP1-208ENST00000613122 IQCF6A8MYZ5 107 aa17.09■□□□□ 0.33
CTDP1-208ENST00000613122 CELA3BP08861 270 aa17.09■□□□□ 0.33
CTDP1-208ENST00000613122 FBLIM1Q8WUP2 373 aa17.09■□□□□ 0.33
CTDP1-208ENST00000613122 BRCA1P38398 1863 aaKnown RBP17.09■□□□□ 0.33
CTDP1-208ENST00000613122 IGHV3OR16-13A0A075B7E8 117 aa17.09■□□□□ 0.33
CTDP1-208ENST00000613122 IGHV3-74A0A0B4J1X5 117 aa17.09■□□□□ 0.33
CTDP1-208ENST00000613122 IGKV1D-43A0A0B4J1Z2 117 aa17.09■□□□□ 0.33
CTDP1-208ENST00000613122 KBTBD11-OT1A0A1B0GTJ5 212 aa17.09■□□□□ 0.33
CTDP1-208ENST00000613122 TMEM187Q14656 261 aa17.09■□□□□ 0.33
CTDP1-208ENST00000613122 CSRP3P50461 194 aa17.09■□□□□ 0.33
CTDP1-208ENST00000613122 C2orf83Q53S99 150 aa17.09■□□□□ 0.33
CTDP1-208ENST00000613122 ZIC4Q8N9L1 334 aa17.09■□□□□ 0.33
CTDP1-208ENST00000613122 TUBGCP6Q96RT7 1819 aa17.09■□□□□ 0.33
CTDP1-208ENST00000613122 SVILO95425 2214 aa17.09■□□□□ 0.33
CTDP1-208ENST00000613122 H0YL77 283 aa17.09■□□□□ 0.33
CTDP1-208ENST00000613122 PGLYRP4Q96LB8 373 aa17.09■□□□□ 0.33
CTDP1-208ENST00000613122 GPR82Q96P67 336 aa17.09■□□□□ 0.33
CTDP1-208ENST00000613122 NABP2Q9BQ15 211 aa17.09■□□□□ 0.33
CTDP1-208ENST00000613122 RPS11P62280 158 aaKnown RBP eCLIP17.08■□□□□ 0.33
CTDP1-208ENST00000613122 ZNF56Q15929 161 aa17.08■□□□□ 0.33
CTDP1-208ENST00000613122 CIDEAO60543 219 aa17.08■□□□□ 0.33
CTDP1-208ENST00000613122 IFITM10A6NMD0 228 aa17.08■□□□□ 0.32
CTDP1-208ENST00000613122 ABLIM2Q6H8Q1 611 aa17.08■□□□□ 0.32
CTDP1-208ENST00000613122 SPTA1P02549 2419 aa17.08■□□□□ 0.32
CTDP1-208ENST00000613122 A0A1W2PRX2 142 aa17.08■□□□□ 0.32
CTDP1-208ENST00000613122 CD74P04233 296 aa17.08■□□□□ 0.32
CTDP1-208ENST00000613122 FAM3BP58499 235 aaPredicted RBP17.08■□□□□ 0.32
CTDP1-208ENST00000613122 FAM74A4Q5TZK3 123 aa17.08■□□□□ 0.32
CTDP1-208ENST00000613122 ARPC1AQ92747 370 aa17.08■□□□□ 0.32
CTDP1-208ENST00000613122 NTN3O00634 580 aaPredicted RBP17.08■□□□□ 0.32
CTDP1-208ENST00000613122 NUDT3O95989 172 aa17.08■□□□□ 0.32
CTDP1-208ENST00000613122 CA2P00918 260 aa17.08■□□□□ 0.32
CTDP1-208ENST00000613122 CFHR1Q03591 330 aa17.07■□□□□ 0.32
CTDP1-208ENST00000613122 TBR1Q16650 682 aa17.07■□□□□ 0.32
CTDP1-208ENST00000613122 SIGIRRQ6IA17 410 aa17.07■□□□□ 0.32
CTDP1-208ENST00000613122 SRSF12Q8WXF0 261 aaKnown RBP17.07■□□□□ 0.32
CTDP1-208ENST00000613122 LINC00312Q9Y6C7 94 aa17.07■□□□□ 0.32
CTDP1-208ENST00000613122 GCGP01275 180 aa17.07■□□□□ 0.32
CTDP1-208ENST00000613122 MT-ND6P03923 174 aa17.07■□□□□ 0.32
CTDP1-208ENST00000613122 TRGC1P0CF51 173 aa17.07■□□□□ 0.32
CTDP1-208ENST00000613122 OR13A1Q8NGR1 328 aa17.07■□□□□ 0.32
CTDP1-208ENST00000613122 NPDC1Q9NQX5 325 aaPredicted RBP17.07■□□□□ 0.32
CTDP1-208ENST00000613122 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.07■□□□□ 0.32
CTDP1-208ENST00000613122 CXCL2P19875 107 aa17.06■□□□□ 0.32
CTDP1-208ENST00000613122 ITLN2Q8WWU7 325 aaPredicted RBP17.06■□□□□ 0.32
CTDP1-208ENST00000613122 MAP1LC3AQ9H492 121 aa17.06■□□□□ 0.32
CTDP1-208ENST00000613122 REPIN1Q9BWE0 567 aaKnown RBP17.06■□□□□ 0.32
CTDP1-208ENST00000613122 NPFFR1Q9GZQ6 430 aa17.06■□□□□ 0.32
CTDP1-208ENST00000613122 HSPB1P04792 205 aaKnown RBP17.06■□□□□ 0.32
CTDP1-208ENST00000613122 THBDP07204 575 aa17.06■□□□□ 0.32
CTDP1-208ENST00000613122 SPSB4Q96A44 273 aa17.06■□□□□ 0.32
CTDP1-208ENST00000613122 FOXI3A8MTJ6 420 aaPredicted RBP17.06■□□□□ 0.32
CTDP1-208ENST00000613122 CYP2G1PQ6ZSU1 146 aa17.06■□□□□ 0.32
CTDP1-208ENST00000613122 LINC00305Q7Z4B0 112 aa17.06■□□□□ 0.32
CTDP1-208ENST00000613122 LHFPL5Q8TAF8 219 aa17.06■□□□□ 0.32
CTDP1-208ENST00000613122 AICDAQ9GZX7 198 aa17.06■□□□□ 0.32
CTDP1-208ENST00000613122 ZFC3H1O60293 1989 aaKnown RBP17.05■□□□□ 0.32
CTDP1-208ENST00000613122 C1QL1O75973 258 aa17.05■□□□□ 0.32
CTDP1-208ENST00000613122 CD69Q07108 199 aa17.05■□□□□ 0.32
CTDP1-208ENST00000613122 PRSS8Q16651 343 aa17.05■□□□□ 0.32
CTDP1-208ENST00000613122 ARID1AO14497 2285 aa17.05■□□□□ 0.32
CTDP1-208ENST00000613122 A6NDN8 102 aa17.05■□□□□ 0.32
CTDP1-208ENST00000613122 NMUP48645 174 aa17.05■□□□□ 0.32
CTDP1-208ENST00000613122 GOLT1AQ6ZVE7 132 aa17.05■□□□□ 0.32
CTDP1-208ENST00000613122 IGHV3-66A0A0C4DH42 116 aa17.05■□□□□ 0.32
CTDP1-208ENST00000613122 IGHV3-49A0A0A0MS15 119 aa17.05■□□□□ 0.32
CTDP1-208ENST00000613122 ZNF207O43670 478 aaKnown RBP17.05■□□□□ 0.32
CTDP1-208ENST00000613122 CLDND2Q8NHS1 167 aa17.05■□□□□ 0.32
CTDP1-208ENST00000613122 ZNF837Q96EG3 531 aaPredicted RBP17.05■□□□□ 0.32
CTDP1-208ENST00000613122 S4R3C0 116 aa17.05■□□□□ 0.32
CTDP1-208ENST00000613122 COLCA1Q6ZS62 124 aa17.04■□□□□ 0.32
CTDP1-208ENST00000613122 C1QL2Q7Z5L3 287 aa17.04■□□□□ 0.32
CTDP1-208ENST00000613122 METRNQ9UJH8 293 aa17.04■□□□□ 0.32
CTDP1-208ENST00000613122 CRYBB3P26998 211 aa17.04■□□□□ 0.32
CTDP1-208ENST00000613122 VDAC2P45880 294 aaPredicted RBP17.04■□□□□ 0.32
CTDP1-208ENST00000613122 AQP10Q96PS8 301 aa17.04■□□□□ 0.32
CTDP1-208ENST00000613122 SEMA5BQ9P283 1151 aa17.04■□□□□ 0.32
CTDP1-208ENST00000613122 PEMTQ9UBM1 199 aa17.04■□□□□ 0.32
CTDP1-208ENST00000613122 TMEM262E9PQX1 116 aa17.04■□□□□ 0.32
CTDP1-208ENST00000613122 AMY1AP04745 511 aa17.04■□□□□ 0.32
CTDP1-208ENST00000613122 GATAD1Q8WUU5 269 aa17.04■□□□□ 0.32
CTDP1-208ENST00000613122 DEPPQ9NTK1 212 aa17.04■□□□□ 0.32
CTDP1-208ENST00000613122 FOXA2Q9Y261 457 aaPredicted RBP17.04■□□□□ 0.32
CTDP1-208ENST00000613122 TP53RKQ96S44 253 aa17.04■□□□□ 0.32
CTDP1-208ENST00000613122 LOC285556D6RIA3 1793 aa17.04■□□□□ 0.32
CTDP1-208ENST00000613122 IGKV3OR2-268A0A0C4DH90 116 aa17.04■□□□□ 0.32
CTDP1-208ENST00000613122 TM2D1Q9BX74 207 aa17.04■□□□□ 0.32
CTDP1-208ENST00000613122 MRPL20Q9BYC9 149 aaKnown RBP17.04■□□□□ 0.32
CTDP1-208ENST00000613122 C21orf62Q9NYP8 219 aa17.04■□□□□ 0.32
CTDP1-208ENST00000613122 MYOFQ9NZM1 2061 aa17.04■□□□□ 0.32
CTDP1-208ENST00000613122 NPFFO15130 113 aa17.03■□□□□ 0.32
CTDP1-208ENST00000613122 CRIPAKQ8N1N5 446 aa17.03■□□□□ 0.32
CTDP1-208ENST00000613122 RAB37Q96AX2 223 aa17.03■□□□□ 0.32
CTDP1-208ENST00000613122 SPRR3Q9UBC9 169 aa17.03■□□□□ 0.32
CTDP1-208ENST00000613122 CEP290O15078 2479 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms