RNA–Protein interactions for RNA: ENST00000611426.4

CBWD3-207, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,381 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-207ENST00000611426 LINC00482Q8N8I6 264 aa17.15■□□□□ 0.34
CBWD3-207ENST00000611426 C8orf31Q8N9H6 132 aa17.15■□□□□ 0.34
CBWD3-207ENST00000611426 EAF1Q96JC9 268 aaPredicted RBP17.15■□□□□ 0.34
CBWD3-207ENST00000611426 OR2S2Q9NQN1 319 aa17.15■□□□□ 0.34
CBWD3-207ENST00000611426 CCL28Q9NRJ3 127 aa17.15■□□□□ 0.34
CBWD3-207ENST00000611426 PIGBOS1A0A0B4J2F0 54 aa17.14■□□□□ 0.33
CBWD3-207ENST00000611426 RPL23AP62750 156 aaKnown RBP17.14■□□□□ 0.33
CBWD3-207ENST00000611426 FAM53AQ6NSI3 398 aaPredicted RBP17.14■□□□□ 0.33
CBWD3-207ENST00000611426 UXS1Q8NBZ7 420 aa17.14■□□□□ 0.33
CBWD3-207ENST00000611426 OR52L2PQ8NGH6 319 aa17.14■□□□□ 0.33
CBWD3-207ENST00000611426 OR2T35Q8NGX2 323 aa17.14■□□□□ 0.33
CBWD3-207ENST00000611426 OR2T10Q8NGZ9 312 aa17.14■□□□□ 0.33
CBWD3-207ENST00000611426 GLYATL2Q8WU03 294 aa17.14■□□□□ 0.33
CBWD3-207ENST00000611426 EDARADDQ8WWZ3 215 aa17.14■□□□□ 0.33
CBWD3-207ENST00000611426 PARP12Q9H0J9 701 aaKnown RBP17.14■□□□□ 0.33
CBWD3-207ENST00000611426 ZFP57Q9NU63 452 aa17.14■□□□□ 0.33
CBWD3-207ENST00000611426 H0Y980 276 aa17.13■□□□□ 0.33
CBWD3-207ENST00000611426 PGLYRP1O75594 196 aaPredicted RBP17.13■□□□□ 0.33
CBWD3-207ENST00000611426 OR5AC1P0C628 307 aa17.13■□□□□ 0.33
CBWD3-207ENST00000611426 GNMTQ14749 295 aa17.13■□□□□ 0.33
CBWD3-207ENST00000611426 Q3ZCU0 254 aa17.13■□□□□ 0.33
CBWD3-207ENST00000611426 TGIF2LXQ8IUE1 241 aa17.13■□□□□ 0.33
CBWD3-207ENST00000611426 MRPL41Q8IXM3 137 aaKnown RBP17.13■□□□□ 0.33
CBWD3-207ENST00000611426 ZNF645Q8N7E2 425 aa17.13■□□□□ 0.33
CBWD3-207ENST00000611426 DRAXINQ8NBI3 349 aaPredicted RBP17.13■□□□□ 0.33
CBWD3-207ENST00000611426 TMEM56Q96MV1 263 aa17.13■□□□□ 0.33
CBWD3-207ENST00000611426 TMEM222Q9H0R3 208 aa17.13■□□□□ 0.33
CBWD3-207ENST00000611426 TMEM56-RWDD3S4R434 201 aa17.13■□□□□ 0.33
CBWD3-207ENST00000611426 C3orf85A0A1B0GTC6 90 aa17.12■□□□□ 0.33
CBWD3-207ENST00000611426 NUDT19A8MXV4 375 aa17.12■□□□□ 0.33
CBWD3-207ENST00000611426 K7EIL1 84 aa17.12■□□□□ 0.33
CBWD3-207ENST00000611426 SNAPC5O75971 98 aa17.12■□□□□ 0.33
CBWD3-207ENST00000611426 UCP1P25874 307 aa17.12■□□□□ 0.33
CBWD3-207ENST00000611426 THBS3P49746 956 aa17.12■□□□□ 0.33
CBWD3-207ENST00000611426 KRTAP10-11P60412 298 aa17.12■□□□□ 0.33
CBWD3-207ENST00000611426 CYCSP99999 105 aaKnown RBP17.12■□□□□ 0.33
CBWD3-207ENST00000611426 EIF4EBP1Q13541 118 aaPredicted RBP17.12■□□□□ 0.33
CBWD3-207ENST00000611426 MORN2Q502X0 79 aa17.12■□□□□ 0.33
CBWD3-207ENST00000611426 ETV3LQ6ZN32 361 aa17.12■□□□□ 0.33
CBWD3-207ENST00000611426 TBC1D26Q86UD7 250 aa17.12■□□□□ 0.33
CBWD3-207ENST00000611426 LGI3Q8N145 548 aa17.12■□□□□ 0.33
CBWD3-207ENST00000611426 STPG2Q8N412 459 aa17.12■□□□□ 0.33
CBWD3-207ENST00000611426 COMMD1Q8N668 190 aa17.12■□□□□ 0.33
CBWD3-207ENST00000611426 IL22RA2Q969J5 263 aa17.12■□□□□ 0.33
CBWD3-207ENST00000611426 ST6GALNAC6Q969X2 333 aa17.12■□□□□ 0.33
CBWD3-207ENST00000611426 AGMATQ9BSE5 352 aa17.12■□□□□ 0.33
CBWD3-207ENST00000611426 GNG12Q9UBI6 72 aa17.12■□□□□ 0.33
CBWD3-207ENST00000611426 DUXBA0A1W2PPF3 345 aa17.11■□□□□ 0.33
CBWD3-207ENST00000611426 LINC01548A6NM66 108 aa17.11■□□□□ 0.33
CBWD3-207ENST00000611426 SIX6O95475 246 aa17.11■□□□□ 0.33
CBWD3-207ENST00000611426 OR8U9P0C7N5 309 aa17.11■□□□□ 0.33
CBWD3-207ENST00000611426 F2RP25116 425 aa17.11■□□□□ 0.33
CBWD3-207ENST00000611426 CD1BP29016 333 aa17.11■□□□□ 0.33
CBWD3-207ENST00000611426 PPP1CCP36873 323 aaKnown RBP17.11■□□□□ 0.33
CBWD3-207ENST00000611426 C18orf65Q6ZTR6 163 aa17.11■□□□□ 0.33
CBWD3-207ENST00000611426 C8orf86Q6ZUL3 223 aa17.11■□□□□ 0.33
CBWD3-207ENST00000611426 Q8N6K4 173 aa17.11■□□□□ 0.33
CBWD3-207ENST00000611426 OR8U1Q8NH10 309 aa17.11■□□□□ 0.33
CBWD3-207ENST00000611426 GPR61Q9BZJ8 451 aa17.11■□□□□ 0.33
CBWD3-207ENST00000611426 NMES1Q9C002 83 aa17.11■□□□□ 0.33
CBWD3-207ENST00000611426 FAM212BQ9NTI7 297 aaPredicted RBP17.11■□□□□ 0.33
CBWD3-207ENST00000611426 GAB2Q9UQC2 676 aa17.11■□□□□ 0.33
CBWD3-207ENST00000611426 HOXD3P31249 432 aaPredicted RBP17.1■□□□□ 0.33
CBWD3-207ENST00000611426 GPR12P47775 334 aa17.1■□□□□ 0.33
CBWD3-207ENST00000611426 DEFB121Q5J5C9 76 aa17.1■□□□□ 0.33
CBWD3-207ENST00000611426 GSG1LQ6UXU4 331 aa17.1■□□□□ 0.33
CBWD3-207ENST00000611426 KLHL30-AS1Q8NEE0 82 aa17.1■□□□□ 0.33
CBWD3-207ENST00000611426 DPF1Q92782 380 aa17.1■□□□□ 0.33
CBWD3-207ENST00000611426 TP53RKQ96S44 253 aa17.1■□□□□ 0.33
CBWD3-207ENST00000611426 LIN7CQ9NUP9 197 aaKnown RBP17.1■□□□□ 0.33
CBWD3-207ENST00000611426 SMLR1H3BR10 107 aa17.09■□□□□ 0.33
CBWD3-207ENST00000611426 AP4M1O00189 453 aa17.09■□□□□ 0.33
CBWD3-207ENST00000611426 SLC31A2O15432 143 aa17.09■□□□□ 0.33
CBWD3-207ENST00000611426 CDS2O95674 445 aa17.09■□□□□ 0.33
CBWD3-207ENST00000611426 MOSP00540 346 aa17.09■□□□□ 0.33
CBWD3-207ENST00000611426 FGL1Q08830 312 aa17.09■□□□□ 0.33
CBWD3-207ENST00000611426 IL15RAQ13261 267 aa17.09■□□□□ 0.33
CBWD3-207ENST00000611426 TEX38Q6PEX7 206 aa17.09■□□□□ 0.33
CBWD3-207ENST00000611426 SLC25A48Q6ZT89 311 aaKnown RBP17.09■□□□□ 0.33
CBWD3-207ENST00000611426 TCTEX1D1Q8N7M0 179 aa17.09■□□□□ 0.33
CBWD3-207ENST00000611426 Q8N9W7 124 aa17.09■□□□□ 0.33
CBWD3-207ENST00000611426 OR11H4Q8NGC9 324 aa17.09■□□□□ 0.33
CBWD3-207ENST00000611426 RASL11BQ9BPW5 248 aa17.09■□□□□ 0.33
CBWD3-207ENST00000611426 WI2-2373I1.2A0A1W2PRP0 233 aa17.08■□□□□ 0.32
CBWD3-207ENST00000611426 TXNL1O43396 289 aa17.08■□□□□ 0.32
CBWD3-207ENST00000611426 MYCNOSP40205 109 aa17.08■□□□□ 0.32
CBWD3-207ENST00000611426 ZNF134P52741 427 aa17.08■□□□□ 0.32
CBWD3-207ENST00000611426 NKX2-5P52952 324 aaPredicted RBP17.08■□□□□ 0.32
CBWD3-207ENST00000611426 EGFEM1PQ0D2K5 195 aa17.08■□□□□ 0.32
CBWD3-207ENST00000611426 CT45A1Q5HYN5 189 aa17.08■□□□□ 0.32
CBWD3-207ENST00000611426 ZNF695Q8IW36 515 aa17.08■□□□□ 0.32
CBWD3-207ENST00000611426 ZNF439Q8NDP4 499 aa17.08■□□□□ 0.32
CBWD3-207ENST00000611426 CT45A3Q8NHU0 189 aa17.08■□□□□ 0.32
CBWD3-207ENST00000611426 S1PR3Q99500 378 aa17.08■□□□□ 0.32
CBWD3-207ENST00000611426 MCRIP2Q9BUT9 160 aaKnown RBP17.08■□□□□ 0.32
CBWD3-207ENST00000611426 GON7Q9BXV9 100 aa17.08■□□□□ 0.32
CBWD3-207ENST00000611426 PLSCR3Q9NRY6 295 aa17.08■□□□□ 0.32
CBWD3-207ENST00000611426 RBM7Q9Y580 266 aaKnown RBP17.08■□□□□ 0.32
CBWD3-207ENST00000611426 HMSDA8MTL9 139 aa17.07■□□□□ 0.32
CBWD3-207ENST00000611426 CCSO14618 274 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms