RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 RYR3Q15413 4870 aa5.76□□□□□ -1.49
CUX1-219ENST00000606749 TENM2Q9NT68 2774 aa5.76□□□□□ -1.49
CUX1-219ENST00000606749 TRAV18A0A075B6X5 111 aa5.76□□□□□ -1.49
CUX1-219ENST00000606749 NPIPB5A8MRT5 1133 aa5.76□□□□□ -1.49
CUX1-219ENST00000606749 PPP5D1E7EU14 171 aa5.76□□□□□ -1.49
CUX1-219ENST00000606749 LGALS9O00182 355 aa5.76□□□□□ -1.49
CUX1-219ENST00000606749 KBTBD11O94819 623 aa5.76□□□□□ -1.49
CUX1-219ENST00000606749 OR2C1O95371 312 aa5.76□□□□□ -1.49
CUX1-219ENST00000606749 HRASP01112 189 aa5.76□□□□□ -1.49
CUX1-219ENST00000606749 HLA-AP01891 365 aaKnown RBP5.76□□□□□ -1.49
CUX1-219ENST00000606749 CRYGCP07315 174 aa5.76□□□□□ -1.49
CUX1-219ENST00000606749 CLEC2LP0C7M8 214 aa5.76□□□□□ -1.49
CUX1-219ENST00000606749 ZNF735P0CB33 412 aa5.76□□□□□ -1.49
CUX1-219ENST00000606749 PTHLHP12272 177 aa5.76□□□□□ -1.49
CUX1-219ENST00000606749 FCGR2CP31995 323 aa5.76□□□□□ -1.49
CUX1-219ENST00000606749 MAS1LP35410 378 aa5.76□□□□□ -1.49
CUX1-219ENST00000606749 KIR2DS2P43631 304 aa5.76□□□□□ -1.49
CUX1-219ENST00000606749 RPL27AP46776 148 aaKnown RBP5.76□□□□□ -1.49
CUX1-219ENST00000606749 MXD1Q05195 221 aa5.76□□□□□ -1.49
CUX1-219ENST00000606749 KLK9Q2XQG4 91 aa5.76□□□□□ -1.49
CUX1-219ENST00000606749 FAM209BQ5JX69 171 aa5.76□□□□□ -1.49
CUX1-219ENST00000606749 ZFAND6Q6FIF0 208 aa5.76□□□□□ -1.49
CUX1-219ENST00000606749 LINC00322Q6ZN03 302 aaPredicted RBP5.76□□□□□ -1.49
CUX1-219ENST00000606749 GPHB5Q86YW7 130 aa5.76□□□□□ -1.49
CUX1-219ENST00000606749 GVQW1Q8N7I0 195 aa5.76□□□□□ -1.49
CUX1-219ENST00000606749 OR5H6Q8NGV6 325 aa5.76□□□□□ -1.49
CUX1-219ENST00000606749 ISOC1Q96CN7 298 aa5.76□□□□□ -1.49
CUX1-219ENST00000606749 FYTTD1Q96QD9 318 aaKnown RBP5.76□□□□□ -1.49
CUX1-219ENST00000606749 SPATA25Q9BR10 227 aa5.76□□□□□ -1.49
CUX1-219ENST00000606749 RNF167Q9H6Y7 350 aa5.76□□□□□ -1.49
CUX1-219ENST00000606749 CCL28Q9NRJ3 127 aa5.76□□□□□ -1.49
CUX1-219ENST00000606749 RHBDL2Q9NX52 303 aa5.76□□□□□ -1.49
CUX1-219ENST00000606749 TAS2R8Q9NYW2 309 aa5.76□□□□□ -1.49
CUX1-219ENST00000606749 FBXL7Q9UJT9 491 aa5.76□□□□□ -1.49
CUX1-219ENST00000606749 KLK9Q9UKQ9 250 aa5.76□□□□□ -1.49
CUX1-219ENST00000606749 STAB2Q8WWQ8 2551 aa5.76□□□□□ -1.49
CUX1-219ENST00000606749 LCE6AA0A183 80 aa5.75□□□□□ -1.49
CUX1-219ENST00000606749 DPPA5A6NC42 116 aa5.75□□□□□ -1.49
CUX1-219ENST00000606749 RBMY1BA6NDE4 496 aaKnown RBP5.75□□□□□ -1.49
CUX1-219ENST00000606749 RBMY1EA6NEQ0 496 aaKnown RBP5.75□□□□□ -1.49
CUX1-219ENST00000606749 C2orf70A6NJV1 201 aa5.75□□□□□ -1.49
CUX1-219ENST00000606749 CGB1A6NKQ9 187 aa5.75□□□□□ -1.49
CUX1-219ENST00000606749 TNFSF12O43508 249 aa5.75□□□□□ -1.49
CUX1-219ENST00000606749 GGCTO75223 188 aaKnown RBP5.75□□□□□ -1.49
CUX1-219ENST00000606749 NDUFB8O95169 186 aa5.75□□□□□ -1.49
CUX1-219ENST00000606749 ATP6V1G2O95670 118 aa5.75□□□□□ -1.49
CUX1-219ENST00000606749 IGHV3-23P01764 117 aa5.75□□□□□ -1.49
CUX1-219ENST00000606749 IFNA6P05013 189 aa5.75□□□□□ -1.49
CUX1-219ENST00000606749 CD7P09564 240 aa5.75□□□□□ -1.49
CUX1-219ENST00000606749 RBMY1DP0C7P1 496 aaKnown RBP5.75□□□□□ -1.49
CUX1-219ENST00000606749 FOLR2P14207 255 aa5.75□□□□□ -1.49
CUX1-219ENST00000606749 AREGP15514 252 aa5.75□□□□□ -1.49
CUX1-219ENST00000606749 CTRB1P17538 263 aa5.75□□□□□ -1.49
CUX1-219ENST00000606749 EDN2P20800 178 aa5.75□□□□□ -1.49
CUX1-219ENST00000606749 PSMB6P28072 239 aa5.75□□□□□ -1.49
CUX1-219ENST00000606749 SCAND1P57086 179 aa5.75□□□□□ -1.49
CUX1-219ENST00000606749 CD81P60033 236 aa5.75□□□□□ -1.49
CUX1-219ENST00000606749 RPL8P62917 257 aaKnown RBP5.75□□□□□ -1.49
CUX1-219ENST00000606749 MSMO1Q15800 293 aa5.75□□□□□ -1.49
CUX1-219ENST00000606749 IDNKQ5T6J7 187 aa5.75□□□□□ -1.49
CUX1-219ENST00000606749 CTRB2Q6GPI1 263 aa5.75□□□□□ -1.49
CUX1-219ENST00000606749 ZNF773Q6PK81 442 aa5.75□□□□□ -1.49
CUX1-219ENST00000606749 CLEC19AQ6UXS0 136 aa5.75□□□□□ -1.49
CUX1-219ENST00000606749 C19orf35Q6ZS72 473 aa5.75□□□□□ -1.49
CUX1-219ENST00000606749 SSX9Q7RTT3 188 aa5.75□□□□□ -1.49
CUX1-219ENST00000606749 HOGA1Q86XE5 327 aa5.75□□□□□ -1.49
CUX1-219ENST00000606749 LAX1Q8IWV1 398 aa5.75□□□□□ -1.49
CUX1-219ENST00000606749 ZBTB34Q8NCN2 500 aa5.75□□□□□ -1.49
CUX1-219ENST00000606749 BEST4Q8NFU0 473 aa5.75□□□□□ -1.49
CUX1-219ENST00000606749 OR13F1Q8NGS4 319 aa5.75□□□□□ -1.49
CUX1-219ENST00000606749 SECTM1Q8WVN6 248 aa5.75□□□□□ -1.49
CUX1-219ENST00000606749 SLC25A38Q96DW6 304 aa5.75□□□□□ -1.49
CUX1-219ENST00000606749 CCDC140Q96MF4 163 aa5.75□□□□□ -1.49
CUX1-219ENST00000606749 NEURL2Q9BR09 285 aa5.75□□□□□ -1.49
CUX1-219ENST00000606749 HIPK2Q9H2X6 1198 aa5.75□□□□□ -1.49
CUX1-219ENST00000606749 Q9H521 79 aa5.75□□□□□ -1.49
CUX1-219ENST00000606749 PLEKHA3Q9HB20 300 aa5.75□□□□□ -1.49
CUX1-219ENST00000606749 TECRQ9NZ01 308 aaKnown RBP5.75□□□□□ -1.49
CUX1-219ENST00000606749 ETV7Q9Y603 341 aa5.75□□□□□ -1.49
CUX1-219ENST00000606749 S4R3C0 116 aa5.75□□□□□ -1.49
CUX1-219ENST00000606749 DNAH7Q8WXX0 4024 aa5.75□□□□□ -1.49
CUX1-219ENST00000606749 A0A0A6YYH2 397 aa5.74□□□□□ -1.49
CUX1-219ENST00000606749 A6NJ64 397 aa5.74□□□□□ -1.49
CUX1-219ENST00000606749 SULT1C2O00338 296 aa5.74□□□□□ -1.49
CUX1-219ENST00000606749 TPPPO94811 219 aa5.74□□□□□ -1.49
CUX1-219ENST00000606749 PPYP01298 95 aa5.74□□□□□ -1.49
CUX1-219ENST00000606749 CLEC3BP05452 202 aa5.74□□□□□ -1.49
CUX1-219ENST00000606749 MYOD1P15172 320 aa5.74□□□□□ -1.49
CUX1-219ENST00000606749 HIST1H1BP16401 226 aaKnown RBP5.74□□□□□ -1.49
CUX1-219ENST00000606749 HLA-GP17693 338 aa5.74□□□□□ -1.49
CUX1-219ENST00000606749 CBLN1P23435 193 aa5.74□□□□□ -1.49
CUX1-219ENST00000606749 ARL3P36405 182 aa5.74□□□□□ -1.49
CUX1-219ENST00000606749 ARPC4P59998 168 aa5.74□□□□□ -1.49
CUX1-219ENST00000606749 TIMM50Q3ZCQ8 353 aa5.74□□□□□ -1.49
CUX1-219ENST00000606749 FAM106AQ4KMX7 169 aa5.74□□□□□ -1.49
CUX1-219ENST00000606749 OR4A47Q6IF82 309 aa5.74□□□□□ -1.49
CUX1-219ENST00000606749 SPAG16Q8N0X2 631 aa5.74□□□□□ -1.49
CUX1-219ENST00000606749 DEFB125Q8N687 156 aa5.74□□□□□ -1.49
CUX1-219ENST00000606749 OR4A5Q8NH83 315 aa5.74□□□□□ -1.49
CUX1-219ENST00000606749 DYNLRB2Q8TF09 96 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms