RNA–Protein interactions for RNA: ENST00000604236.5

FGFR2-222, Transcript of fibroblast growth factor receptor 2, human

TSL 1 (best)

Gene FGFR2, Length 3,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FGFR2-222	ENST00000604236	GSX1	Q9H4S2	264 aa	Predicted RBP	12.79	□□□□□ -0.36
FGFR2-222	ENST00000604236	ASCL3	Q9NQ33	180 aa		12.79	□□□□□ -0.36
FGFR2-222	ENST00000604236	SIRT7	Q9NRC8	400 aa		12.79	□□□□□ -0.36
FGFR2-222	ENST00000604236	ZNF462	Q96JM2	2506 aa		12.79	□□□□□ -0.36
FGFR2-222	ENST00000604236	BCL2	P10415	239 aa		12.79	□□□□□ -0.36
FGFR2-222	ENST00000604236	GRN	P28799	593 aa	Known RBP	12.79	□□□□□ -0.36
FGFR2-222	ENST00000604236	OR5I1	Q13606	314 aa		12.79	□□□□□ -0.36
FGFR2-222	ENST00000604236	MISP3	Q96FF7	219 aa		12.79	□□□□□ -0.36
FGFR2-222	ENST00000604236	IMMP2L	Q96T52	175 aa		12.79	□□□□□ -0.36
FGFR2-222	ENST00000604236	CARHSP1	Q9Y2V2	147 aa	Known RBP	12.79	□□□□□ -0.36
FGFR2-222	ENST00000604236	HILPDA	Q9Y5L2	63 aa		12.79	□□□□□ -0.36
FGFR2-222	ENST00000604236	HIVEP2	P31629	2446 aa		12.79	□□□□□ -0.36
FGFR2-222	ENST00000604236	FASN	P49327	2511 aa	Known RBP	12.78	□□□□□ -0.36
FGFR2-222	ENST00000604236	UTP20	O75691	2785 aa	Known RBP	12.78	□□□□□ -0.36
FGFR2-222	ENST00000604236	NUDT19	A8MXV4	375 aa		12.78	□□□□□ -0.36
FGFR2-222	ENST00000604236	LINC00587	B1AMM8	73 aa		12.78	□□□□□ -0.36
FGFR2-222	ENST00000604236	CD1B	P29016	333 aa		12.78	□□□□□ -0.36
FGFR2-222	ENST00000604236	GAMT	Q14353	236 aa		12.78	□□□□□ -0.36
FGFR2-222	ENST00000604236	MRPL41	Q8IXM3	137 aa	Known RBP	12.78	□□□□□ -0.36
FGFR2-222	ENST00000604236	ODF3L1	Q8IXM7	274 aa		12.78	□□□□□ -0.36
FGFR2-222	ENST00000604236	MEGF10	Q96KG7	1140 aa		12.78	□□□□□ -0.36
FGFR2-222	ENST00000604236	PKIB	Q9C010	78 aa		12.78	□□□□□ -0.36
FGFR2-222	ENST00000604236	ACTR3C	Q9C0K3	210 aa	Predicted RBP	12.78	□□□□□ -0.36
FGFR2-222	ENST00000604236	WDR61	Q9GZS3	305 aa	Known RBP	12.78	□□□□□ -0.36
FGFR2-222	ENST00000604236	UNKL	Q9H9P5	680 aa	Known RBP	12.78	□□□□□ -0.36
FGFR2-222	ENST00000604236	SLC35D1	Q9NTN3	355 aa		12.78	□□□□□ -0.36
FGFR2-222	ENST00000604236	FOXH1	O75593	365 aa		12.78	□□□□□ -0.36
FGFR2-222	ENST00000604236	TNFSF13	O75888	250 aa		12.78	□□□□□ -0.36
FGFR2-222	ENST00000604236	LEMD1	Q68G75	181 aa		12.78	□□□□□ -0.36
FGFR2-222	ENST00000604236	CLDND2	Q8NHS1	167 aa		12.78	□□□□□ -0.36
FGFR2-222	ENST00000604236	POM121	Q96HA1	1249 aa		12.78	□□□□□ -0.36
FGFR2-222	ENST00000604236	EAF1	Q96JC9	268 aa	Predicted RBP	12.78	□□□□□ -0.36
FGFR2-222	ENST00000604236	CLCF1	Q9UBD9	225 aa		12.78	□□□□□ -0.36
FGFR2-222	ENST00000604236	DKK4	Q9UBT3	224 aa		12.78	□□□□□ -0.36
FGFR2-222	ENST00000604236	ZNF705F	A8MVS1	300 aa	Predicted RBP	12.77	□□□□□ -0.36
FGFR2-222	ENST00000604236	ZNF705D	P0CH99	300 aa	Predicted RBP	12.77	□□□□□ -0.36
FGFR2-222	ENST00000604236	ZNF705B	P0CI00	300 aa	Predicted RBP	12.77	□□□□□ -0.36
FGFR2-222	ENST00000604236	C11orf53	Q8IXP5	236 aa		12.77	□□□□□ -0.36
FGFR2-222	ENST00000604236	LFNG	Q8NES3	379 aa		12.77	□□□□□ -0.36
FGFR2-222	ENST00000604236	COMMD5	Q9GZQ3	224 aa		12.77	□□□□□ -0.36
FGFR2-222	ENST00000604236	KIAA1456	Q9P272	454 aa		12.77	□□□□□ -0.36
FGFR2-222	ENST00000604236	PRSS44	E7EML9	344 aa		12.77	□□□□□ -0.37
FGFR2-222	ENST00000604236	C1QTNF9	P0C862	333 aa		12.77	□□□□□ -0.37
FGFR2-222	ENST00000604236	ZNF883	P0CG24	379 aa		12.77	□□□□□ -0.37
FGFR2-222	ENST00000604236	ARL14EPL	P0DKL9	152 aa		12.77	□□□□□ -0.37
FGFR2-222	ENST00000604236	RAB5C	P51148	216 aa		12.77	□□□□□ -0.37
FGFR2-222	ENST00000604236	PSG5	Q15238	335 aa		12.77	□□□□□ -0.37
FGFR2-222	ENST00000604236	SEM1	Q6ZVN7	128 aa		12.77	□□□□□ -0.37
FGFR2-222	ENST00000604236	MS4A5	Q9H3V2	200 aa		12.77	□□□□□ -0.37
FGFR2-222	ENST00000604236	RNF115	Q9Y4L5	304 aa		12.77	□□□□□ -0.37
FGFR2-222	ENST00000604236	PPP5D1	E7EU14	171 aa		12.76	□□□□□ -0.37
FGFR2-222	ENST00000604236	SLC25A17	O43808	307 aa		12.76	□□□□□ -0.37
FGFR2-222	ENST00000604236	OPRK1	P41145	380 aa		12.76	□□□□□ -0.37
FGFR2-222	ENST00000604236	B2M	P61769	119 aa		12.76	□□□□□ -0.37
FGFR2-222	ENST00000604236	TMEM241	Q24JQ0	296 aa		12.76	□□□□□ -0.37
FGFR2-222	ENST00000604236	BSX	Q3C1V8	233 aa		12.76	□□□□□ -0.37
FGFR2-222	ENST00000604236	LYPD2	Q6UXB3	125 aa		12.76	□□□□□ -0.37
FGFR2-222	ENST00000604236	PARL	Q9H300	379 aa		12.76	□□□□□ -0.37
FGFR2-222	ENST00000604236	PLSCR2	Q9NRY7	297 aa		12.76	□□□□□ -0.37
FGFR2-222	ENST00000604236	SAA2-SAA4	A0A096LPE2	208 aa		12.76	□□□□□ -0.37
FGFR2-222	ENST00000604236	IGLV2-14	P01704	120 aa		12.76	□□□□□ -0.37
FGFR2-222	ENST00000604236	TRGC1	P0CF51	173 aa		12.76	□□□□□ -0.37
FGFR2-222	ENST00000604236	SAA2	P0DJI9	122 aa	Predicted RBP	12.76	□□□□□ -0.37
FGFR2-222	ENST00000604236	EDARADD	Q8WWZ3	215 aa		12.76	□□□□□ -0.37
FGFR2-222	ENST00000604236	HARBI1	Q96MB7	349 aa		12.76	□□□□□ -0.37
FGFR2-222	ENST00000604236	RNF7	Q9UBF6	113 aa		12.76	□□□□□ -0.37
FGFR2-222	ENST00000604236	TRAV34	A0A0B4J273	112 aa		12.76	□□□□□ -0.37
FGFR2-222	ENST00000604236	IQCF6	A8MYZ5	107 aa		12.76	□□□□□ -0.37
FGFR2-222	ENST00000604236	CLN5	O75503	358 aa		12.76	□□□□□ -0.37
FGFR2-222	ENST00000604236	CA1	P00915	261 aa	Predicted RBP	12.76	□□□□□ -0.37
FGFR2-222	ENST00000604236	FABP1	P07148	127 aa		12.76	□□□□□ -0.37
FGFR2-222	ENST00000604236	COX5B	P10606	129 aa		12.76	□□□□□ -0.37
FGFR2-222	ENST00000604236	IGFBP2	P18065	325 aa		12.76	□□□□□ -0.37
FGFR2-222	ENST00000604236	GALR1	P47211	349 aa		12.76	□□□□□ -0.37
FGFR2-222	ENST00000604236	TCTA	P57738	103 aa		12.76	□□□□□ -0.37
FGFR2-222	ENST00000604236		J3QR06	171 aa		12.75	□□□□□ -0.37
FGFR2-222	ENST00000604236	OR10A7	Q8NGE5	316 aa		12.75	□□□□□ -0.37
FGFR2-222	ENST00000604236	SSBP3	Q9BWW4	388 aa	Predicted RBP	12.75	□□□□□ -0.37
FGFR2-222	ENST00000604236	C16orf97	H3BN30	126 aa		12.75	□□□□□ -0.37
FGFR2-222	ENST00000604236	SCGB1D1	O95968	90 aa		12.75	□□□□□ -0.37
FGFR2-222	ENST00000604236	SUMO1	P63165	101 aa	Known RBP	12.75	□□□□□ -0.37
FGFR2-222	ENST00000604236	MEF2B	Q02080	365 aa	Predicted RBP	12.75	□□□□□ -0.37
FGFR2-222	ENST00000604236	OR2T6	Q8NHC8	308 aa		12.75	□□□□□ -0.37
FGFR2-222	ENST00000604236	PRR7	Q8TB68	274 aa		12.75	□□□□□ -0.37
FGFR2-222	ENST00000604236	SLC25A10	Q9UBX3	287 aa	Predicted RBP	12.75	□□□□□ -0.37
FGFR2-222	ENST00000604236	IGHV3OR16-10	A0A075B7F0	116 aa		12.75	□□□□□ -0.37
FGFR2-222	ENST00000604236	MOS	P00540	346 aa		12.75	□□□□□ -0.37
FGFR2-222	ENST00000604236	TMEM108	Q6UXF1	575 aa		12.75	□□□□□ -0.37
FGFR2-222	ENST00000604236	COMMD1	Q8N668	190 aa		12.75	□□□□□ -0.37
FGFR2-222	ENST00000604236	ONECUT1	Q9UBC0	465 aa		12.75	□□□□□ -0.37
FGFR2-222	ENST00000604236	MRPS18C	Q9Y3D5	142 aa	Known RBP	12.75	□□□□□ -0.37
FGFR2-222	ENST00000604236	FAM215A	Q9Y5M1	114 aa		12.75	□□□□□ -0.37
FGFR2-222	ENST00000604236	CXorf65	A6NEN9	183 aa		12.74	□□□□□ -0.37
FGFR2-222	ENST00000604236	SS18L1	O75177	396 aa	Predicted RBP	12.74	□□□□□ -0.37
FGFR2-222	ENST00000604236	KRTAP27-1	Q3LI81	207 aa		12.74	□□□□□ -0.37
FGFR2-222	ENST00000604236	MORN2	Q502X0	79 aa		12.74	□□□□□ -0.37
FGFR2-222	ENST00000604236	C1orf229	Q6ZS94	237 aa	Predicted RBP	12.74	□□□□□ -0.37
FGFR2-222	ENST00000604236	TMEM147	Q9BVK8	224 aa		12.74	□□□□□ -0.37
FGFR2-222	ENST00000604236	TOLLIP	Q9H0E2	274 aa		12.74	□□□□□ -0.37
FGFR2-222	ENST00000604236	TCF19	Q9Y242	345 aa		12.74	□□□□□ -0.37

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