RNA–Protein interactions for RNA: ENST00000603837.1

LINC01109-201, Transcript of long intergenic non-protein coding RNA 1109, humanhuman

BASIC

Gene LINC01109, Length 3,081 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01109-201ENST00000603837 CLDN23Q96B33 292 aa3.96□□□□□ -1.78
LINC01109-201ENST00000603837 DDIT4LQ96D03 193 aa3.96□□□□□ -1.78
LINC01109-201ENST00000603837 ST20Q9HBF5 79 aa3.96□□□□□ -1.78
LINC01109-201ENST00000603837 FAM206AQ9NX38 181 aa3.96□□□□□ -1.78
LINC01109-201ENST00000603837 A0A0J9YY10 115 aa3.96□□□□□ -1.78
LINC01109-201ENST00000603837 LOC107984640A0A0U1RRK4 108 aa3.96□□□□□ -1.78
LINC01109-201ENST00000603837 A0A1B0GX78 115 aa3.96□□□□□ -1.78
LINC01109-201ENST00000603837 LRRC3CA6NJW4 275 aa3.96□□□□□ -1.78
LINC01109-201ENST00000603837 CEBPZOSA8MTT3 80 aa3.96□□□□□ -1.78
LINC01109-201ENST00000603837 C17orf112F2Z3M2 114 aa3.96□□□□□ -1.78
LINC01109-201ENST00000603837 NGFP01138 241 aa3.96□□□□□ -1.78
LINC01109-201ENST00000603837 IGLV3-25P01717 112 aa3.96□□□□□ -1.78
LINC01109-201ENST00000603837 HBZP02008 142 aa3.96□□□□□ -1.78
LINC01109-201ENST00000603837 IL9P15248 144 aa3.96□□□□□ -1.78
LINC01109-201ENST00000603837 PI3P19957 117 aa3.96□□□□□ -1.78
LINC01109-201ENST00000603837 IER3P46695 156 aa3.96□□□□□ -1.78
LINC01109-201ENST00000603837 SLC35B1P78383 322 aa3.96□□□□□ -1.78
LINC01109-201ENST00000603837 MRPS34P82930 218 aaKnown RBP3.96□□□□□ -1.78
LINC01109-201ENST00000603837 MFSD12Q6NUT3 480 aa3.96□□□□□ -1.78
LINC01109-201ENST00000603837 Q6ZT83 130 aa3.96□□□□□ -1.78
LINC01109-201ENST00000603837 PNPLA5Q7Z6Z6 429 aaPredicted RBP3.96□□□□□ -1.78
LINC01109-201ENST00000603837 HMGN2P46Q86SG4 172 aa3.96□□□□□ -1.78
LINC01109-201ENST00000603837 SKA2Q8WVK7 121 aaPredicted RBP3.96□□□□□ -1.78
LINC01109-201ENST00000603837 RTN4IP1Q8WWV3 396 aaPredicted RBP3.96□□□□□ -1.78
LINC01109-201ENST00000603837 PCED1BQ96HM7 432 aa3.96□□□□□ -1.78
LINC01109-201ENST00000603837 ZNF665Q9H7R5 613 aa3.96□□□□□ -1.78
LINC01109-201ENST00000603837 BPIFA1Q9NP55 256 aa3.96□□□□□ -1.78
LINC01109-201ENST00000603837 PNRC2Q9NPJ4 139 aaKnown RBP3.96□□□□□ -1.78
LINC01109-201ENST00000603837 R4GN57 208 aa3.96□□□□□ -1.78
LINC01109-201ENST00000603837 SPEGQ15772 3267 aa3.95□□□□□ -1.78
LINC01109-201ENST00000603837 PLXNA4Q9HCM2 1894 aa3.95□□□□□ -1.78
LINC01109-201ENST00000603837 DENND4CQ5VZ89 1909 aa3.95□□□□□ -1.78
LINC01109-201ENST00000603837 TRAV38-1A0A0B4J264 116 aa3.95□□□□□ -1.78
LINC01109-201ENST00000603837 FAM236DA0A1B0GTK5 79 aa3.95□□□□□ -1.78
LINC01109-201ENST00000603837 MYBPHLA2RUH7 354 aa3.95□□□□□ -1.78
LINC01109-201ENST00000603837 TMEM189A5PLL7 270 aa3.95□□□□□ -1.78
LINC01109-201ENST00000603837 TMEM8BA6NDV4 472 aa3.95□□□□□ -1.78
LINC01109-201ENST00000603837 USP17L23D6RBM5 183 aa3.95□□□□□ -1.78
LINC01109-201ENST00000603837 ATP5LO75964 103 aa3.95□□□□□ -1.78
LINC01109-201ENST00000603837 AGFG2O95081 481 aa3.95□□□□□ -1.78
LINC01109-201ENST00000603837 FAM236CP0DP71 79 aa3.95□□□□□ -1.78
LINC01109-201ENST00000603837 SLC25A6P12236 298 aa3.95□□□□□ -1.78
LINC01109-201ENST00000603837 IGLL1P15814 213 aa3.95□□□□□ -1.78
LINC01109-201ENST00000603837 GATA2P23769 480 aaPredicted RBP3.95□□□□□ -1.78
LINC01109-201ENST00000603837 RBMXP38159 391 aaKnown RBP3.95□□□□□ -1.78
LINC01109-201ENST00000603837 LHX2P50458 406 aa3.95□□□□□ -1.78
LINC01109-201ENST00000603837 EMP1P54849 157 aa3.95□□□□□ -1.78
LINC01109-201ENST00000603837 OR1D5P58170 312 aa3.95□□□□□ -1.78
LINC01109-201ENST00000603837 SUPT4H1P63272 117 aaKnown RBP3.95□□□□□ -1.78
LINC01109-201ENST00000603837 POU3F1Q03052 451 aaPredicted RBP3.95□□□□□ -1.78
LINC01109-201ENST00000603837 TGFBR3Q03167 851 aa3.95□□□□□ -1.78
LINC01109-201ENST00000603837 CDSNQ15517 529 aa3.95□□□□□ -1.78
LINC01109-201ENST00000603837 TBR1Q16650 682 aa3.95□□□□□ -1.78
LINC01109-201ENST00000603837 SP5Q6BEB4 398 aaPredicted RBP3.95□□□□□ -1.78
LINC01109-201ENST00000603837 MRPL54Q6P161 138 aaKnown RBP3.95□□□□□ -1.78
LINC01109-201ENST00000603837 FAM19A1Q7Z5A9 133 aa3.95□□□□□ -1.78
LINC01109-201ENST00000603837 OR2L13Q8N349 312 aa3.95□□□□□ -1.78
LINC01109-201ENST00000603837 GVQW1Q8N7I0 195 aa3.95□□□□□ -1.78
LINC01109-201ENST00000603837 OR2M3Q8NG83 312 aa3.95□□□□□ -1.78
LINC01109-201ENST00000603837 TMEM204Q9BSN7 226 aa3.95□□□□□ -1.78
LINC01109-201ENST00000603837 TM2D1Q9BX74 207 aa3.95□□□□□ -1.78
LINC01109-201ENST00000603837 C5orf66Q9H5L9 145 aa3.95□□□□□ -1.78
LINC01109-201ENST00000603837 TMEM30AQ9NV96 361 aa3.95□□□□□ -1.78
LINC01109-201ENST00000603837 ZNF443Q9Y2A4 671 aaPredicted RBP3.95□□□□□ -1.78
LINC01109-201ENST00000603837 INSIG2Q9Y5U4 225 aa3.95□□□□□ -1.78
LINC01109-201ENST00000603837 KCNE3Q9Y6H6 103 aa3.95□□□□□ -1.78
LINC01109-201ENST00000603837 TNRC6AQ8NDV7 1962 aaKnown RBP3.95□□□□□ -1.78
LINC01109-201ENST00000603837 ARID1AO14497 2285 aa3.95□□□□□ -1.78
LINC01109-201ENST00000603837 NSG1A0A0A6YYJ2 146 aa3.95□□□□□ -1.78
LINC01109-201ENST00000603837 ZNF503-AS2A6NEH8 195 aa3.95□□□□□ -1.78
LINC01109-201ENST00000603837 C9orf118A6NHY6 69 aa3.95□□□□□ -1.78
LINC01109-201ENST00000603837 H3BUT2 72 aa3.95□□□□□ -1.78
LINC01109-201ENST00000603837 SLC17A2O00624 439 aa3.95□□□□□ -1.78
LINC01109-201ENST00000603837 KBTBD11O94819 623 aa3.95□□□□□ -1.78
LINC01109-201ENST00000603837 ELANEP08246 267 aa3.95□□□□□ -1.78
LINC01109-201ENST00000603837 NANOS3P60323 173 aaKnown RBP3.95□□□□□ -1.78
LINC01109-201ENST00000603837 YPEL3P61236 119 aaPredicted RBP3.95□□□□□ -1.78
LINC01109-201ENST00000603837 TAF10Q12962 218 aa3.95□□□□□ -1.78
LINC01109-201ENST00000603837 EIF3IQ13347 325 aaKnown RBP3.95□□□□□ -1.78
LINC01109-201ENST00000603837 HLA-DRB5Q30154 266 aa3.95□□□□□ -1.78
LINC01109-201ENST00000603837 TIGITQ495A1 244 aa3.95□□□□□ -1.78
LINC01109-201ENST00000603837 ALG10Q5BKT4 473 aa3.95□□□□□ -1.78
LINC01109-201ENST00000603837 CLLU1OSQ5K130 101 aa3.95□□□□□ -1.78
LINC01109-201ENST00000603837 C1orf195Q5TG92 126 aa3.95□□□□□ -1.78
LINC01109-201ENST00000603837 FOXI2Q6ZQN5 318 aa3.95□□□□□ -1.78
LINC01109-201ENST00000603837 TCF23Q7RTU1 214 aa3.95□□□□□ -1.78
LINC01109-201ENST00000603837 BORCS7Q96B45 105 aa3.95□□□□□ -1.78
LINC01109-201ENST00000603837 SCGB3A2Q96PL1 93 aa3.95□□□□□ -1.78
LINC01109-201ENST00000603837 KXD1Q9BQD3 176 aa3.95□□□□□ -1.78
LINC01109-201ENST00000603837 AGMATQ9BSE5 352 aa3.95□□□□□ -1.78
LINC01109-201ENST00000603837 C1QTNF4Q9BXJ3 329 aa3.95□□□□□ -1.78
LINC01109-201ENST00000603837 POLR1DQ9Y2S0 133 aa3.95□□□□□ -1.78
LINC01109-201ENST00000603837 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.95□□□□□ -1.78
LINC01109-201ENST00000603837 KIR2DS5A0A0G2JLQ3 304 aa3.94□□□□□ -1.78
LINC01109-201ENST00000603837 A0A0G2JNG1 304 aa3.94□□□□□ -1.78
LINC01109-201ENST00000603837 A0A1W2PRF3 423 aa3.94□□□□□ -1.78
LINC01109-201ENST00000603837 A0A1W2PRM7 423 aa3.94□□□□□ -1.78
LINC01109-201ENST00000603837 F2Z2F3 143 aa3.94□□□□□ -1.78
LINC01109-201ENST00000603837 SDCBPO00560 298 aaPredicted RBP3.94□□□□□ -1.78
LINC01109-201ENST00000603837 CDC42EP2O14613 210 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms