RNA–Protein interactions for RNA: ENST00000601592.5

USE1-209, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 3

Gene USE1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-209ENST00000601592 SSBP1Q04837 148 aaKnown RBP9.98□□□□□ -0.81
USE1-209ENST00000601592 OXLD1Q5BKU9 147 aa9.98□□□□□ -0.81
USE1-209ENST00000601592 C10orf55Q5SWW7 151 aa9.98□□□□□ -0.81
USE1-209ENST00000601592 FAAP20Q6NZ36 180 aa9.98□□□□□ -0.81
USE1-209ENST00000601592 SLC38A6Q8IZM9 456 aa9.98□□□□□ -0.81
USE1-209ENST00000601592 CD300LFQ8TDQ1 290 aa9.98□□□□□ -0.81
USE1-209ENST00000601592 C4orf3Q8WVX3 66 aa9.98□□□□□ -0.81
USE1-209ENST00000601592 RAX2Q96IS3 184 aa9.98□□□□□ -0.81
USE1-209ENST00000601592 AIFM2Q9BRQ8 373 aa9.98□□□□□ -0.81
USE1-209ENST00000601592 NXF2Q9GZY0 626 aaKnown RBP9.98□□□□□ -0.81
USE1-209ENST00000601592 COA4Q9NYJ1 87 aa9.98□□□□□ -0.81
USE1-209ENST00000601592 VSIG4Q9Y279 399 aa9.98□□□□□ -0.81
USE1-209ENST00000601592 ZNF701M0R085 212 aaPredicted RBP9.97□□□□□ -0.81
USE1-209ENST00000601592 CTDSPLO15194 276 aa9.97□□□□□ -0.81
USE1-209ENST00000601592 HPRT1P00492 218 aa9.97□□□□□ -0.81
USE1-209ENST00000601592 IGLL1P15814 213 aa9.97□□□□□ -0.81
USE1-209ENST00000601592 NQO2P16083 231 aa9.97□□□□□ -0.81
USE1-209ENST00000601592 PI3P19957 117 aa9.97□□□□□ -0.81
USE1-209ENST00000601592 F2RP25116 425 aa9.97□□□□□ -0.81
USE1-209ENST00000601592 MYCNOSP40205 109 aa9.97□□□□□ -0.81
USE1-209ENST00000601592 TAS2R31P59538 309 aa9.97□□□□□ -0.81
USE1-209ENST00000601592 DEFA6Q01524 100 aa9.97□□□□□ -0.81
USE1-209ENST00000601592 MRGPRG-AS1Q2M3A8 158 aa9.97□□□□□ -0.81
USE1-209ENST00000601592 OR4A47Q6IF82 309 aa9.97□□□□□ -0.81
USE1-209ENST00000601592 MRPL41Q8IXM3 137 aaKnown RBP9.97□□□□□ -0.81
USE1-209ENST00000601592 PUSL1Q8N0Z8 303 aaKnown RBP9.97□□□□□ -0.81
USE1-209ENST00000601592 ARRDC1Q8N5I2 433 aa9.97□□□□□ -0.81
USE1-209ENST00000601592 LINC00482Q8N8I6 264 aa9.97□□□□□ -0.81
USE1-209ENST00000601592 ZNF491Q8N8L2 437 aa9.97□□□□□ -0.81
USE1-209ENST00000601592 MYOZ3Q8TDC0 251 aa9.97□□□□□ -0.81
USE1-209ENST00000601592 DGCR14Q96DF8 476 aaKnown RBP9.97□□□□□ -0.81
USE1-209ENST00000601592 UBE2E2Q96LR5 201 aa9.97□□□□□ -0.81
USE1-209ENST00000601592 FYTTD1Q96QD9 318 aaKnown RBP9.97□□□□□ -0.81
USE1-209ENST00000601592 RSRP1Q9BUV0 290 aa9.97□□□□□ -0.81
USE1-209ENST00000601592 IGHV3-11P01762 117 aa9.96□□□□□ -0.82
USE1-209ENST00000601592 CD74P04233 296 aa9.96□□□□□ -0.82
USE1-209ENST00000601592 AKAIN1P0CW23 69 aa9.96□□□□□ -0.82
USE1-209ENST00000601592 LPAR6P43657 344 aa9.96□□□□□ -0.82
USE1-209ENST00000601592 RPL27AP46776 148 aaKnown RBP9.96□□□□□ -0.82
USE1-209ENST00000601592 UCP3P55916 312 aa9.96□□□□□ -0.82
USE1-209ENST00000601592 DEFA5Q01523 94 aa9.96□□□□□ -0.82
USE1-209ENST00000601592 MEF2DQ14814 521 aa9.96□□□□□ -0.82
USE1-209ENST00000601592 PYDC2Q56P42 97 aa9.96□□□□□ -0.82
USE1-209ENST00000601592 TBC1D26Q86UD7 250 aa9.96□□□□□ -0.82
USE1-209ENST00000601592 TMEM167AQ8TBQ9 72 aa9.96□□□□□ -0.82
USE1-209ENST00000601592 SPIN2AQ99865 258 aa9.96□□□□□ -0.82
USE1-209ENST00000601592 SPIN2BQ9BPZ2 258 aa9.96□□□□□ -0.82
USE1-209ENST00000601592 SLA2Q9H6Q3 261 aa9.96□□□□□ -0.82
USE1-209ENST00000601592 PLEKHA2Q9HB19 425 aa9.96□□□□□ -0.82
USE1-209ENST00000601592 SLC2A9Q9NRM0 540 aa9.96□□□□□ -0.82
USE1-209ENST00000601592 TMEM140Q9NV12 185 aa9.96□□□□□ -0.82
USE1-209ENST00000601592 COMMD9Q9P000 198 aa9.96□□□□□ -0.82
USE1-209ENST00000601592 DPPA5A6NC42 116 aa9.95□□□□□ -0.82
USE1-209ENST00000601592 HMX3A6NHT5 357 aa9.95□□□□□ -0.82
USE1-209ENST00000601592 DISC1C4P0D8 188 aa9.95□□□□□ -0.82
USE1-209ENST00000601592 OR9G9P0C7N8 305 aa9.95□□□□□ -0.82
USE1-209ENST00000601592 MYOD1P15172 320 aa9.95□□□□□ -0.82
USE1-209ENST00000601592 RPL8P62917 257 aaKnown RBP9.95□□□□□ -0.82
USE1-209ENST00000601592 KIAA0141Q14154 515 aaPredicted RBP9.95□□□□□ -0.82
USE1-209ENST00000601592 SAMD5Q5TGI4 173 aa9.95□□□□□ -0.82
USE1-209ENST00000601592 ASPHD1Q5U4P2 390 aa9.95□□□□□ -0.82
USE1-209ENST00000601592 LHFPL1Q86WI0 220 aa9.95□□□□□ -0.82
USE1-209ENST00000601592 OR11H1Q8NG94 326 aa9.95□□□□□ -0.82
USE1-209ENST00000601592 OR4C16Q8NGL9 310 aa9.95□□□□□ -0.82
USE1-209ENST00000601592 OR4A5Q8NH83 315 aa9.95□□□□□ -0.82
USE1-209ENST00000601592 DPF1Q92782 380 aa9.95□□□□□ -0.82
USE1-209ENST00000601592 TMEM68Q96MH6 324 aa9.95□□□□□ -0.82
USE1-209ENST00000601592 P2RX4Q99571 388 aa9.95□□□□□ -0.82
USE1-209ENST00000601592 ALX4Q9H161 411 aaPredicted RBP9.95□□□□□ -0.82
USE1-209ENST00000601592 BET1LQ9NYM9 111 aa9.95□□□□□ -0.82
USE1-209ENST00000601592 TRAV3A0A0B4J244 114 aa9.94□□□□□ -0.82
USE1-209ENST00000601592 C13orf42A0A1B0GVH6 325 aa9.94□□□□□ -0.82
USE1-209ENST00000601592 MARCH11A6NNE9 402 aa9.94□□□□□ -0.82
USE1-209ENST00000601592 H3BUA1 57 aa9.94□□□□□ -0.82
USE1-209ENST00000601592 I3L521 148 aa9.94□□□□□ -0.82
USE1-209ENST00000601592 GSTZ1O43708 216 aaPredicted RBP9.94□□□□□ -0.82
USE1-209ENST00000601592 KRASP01116 189 aa9.94□□□□□ -0.82
USE1-209ENST00000601592 HLA-GP17693 338 aa9.94□□□□□ -0.82
USE1-209ENST00000601592 MAS1LP35410 378 aa9.94□□□□□ -0.82
USE1-209ENST00000601592 G6PCP35575 357 aa9.94□□□□□ -0.82
USE1-209ENST00000601592 PIGPP57054 158 aa9.94□□□□□ -0.82
USE1-209ENST00000601592 ZNF616Q08AN1 781 aa9.94□□□□□ -0.82
USE1-209ENST00000601592 WFDC9Q8NEX5 89 aa9.94□□□□□ -0.82
USE1-209ENST00000601592 OR1N2Q8NGR9 330 aa9.94□□□□□ -0.82
USE1-209ENST00000601592 OR13C8Q8NGS7 320 aa9.94□□□□□ -0.82
USE1-209ENST00000601592 TERB2Q8NHR7 220 aa9.94□□□□□ -0.82
USE1-209ENST00000601592 ZFAND1Q8TCF1 268 aa9.94□□□□□ -0.82
USE1-209ENST00000601592 MARCH1Q8TCQ1 289 aa9.94□□□□□ -0.82
USE1-209ENST00000601592 RCC1LQ96I51 464 aaKnown RBP9.94□□□□□ -0.82
USE1-209ENST00000601592 MCUBQ9NWR8 336 aa9.94□□□□□ -0.82
USE1-209ENST00000601592 COPZ2Q9P299 210 aa9.94□□□□□ -0.82
USE1-209ENST00000601592 ANKRD20A5PA0PJZ0 165 aa9.93□□□□□ -0.82
USE1-209ENST00000601592 UPK2O00526 184 aa9.93□□□□□ -0.82
USE1-209ENST00000601592 PRH1P02810 166 aa9.93□□□□□ -0.82
USE1-209ENST00000601592 SERPINE2P07093 398 aa9.93□□□□□ -0.82
USE1-209ENST00000601592 LGALS1P09382 135 aaKnown RBP9.93□□□□□ -0.82
USE1-209ENST00000601592 OR8U8P0C7N1 319 aa9.93□□□□□ -0.82
USE1-209ENST00000601592 ZNF735P0CB33 412 aa9.93□□□□□ -0.82
USE1-209ENST00000601592 POU2AF1Q16633 256 aa9.93□□□□□ -0.82
USE1-209ENST00000601592 BEAN1Q3B7T3 259 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms