RNA–Protein interactions for RNA: ENST00000600573.5

PNKP-214, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,602 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-214ENST00000600573 POLR3KQ9Y2Y1 108 aaPredicted RBP16.29■□□□□ 0.2
PNKP-214ENST00000600573 HRNRQ86YZ3 2850 aaPredicted RBP16.28■□□□□ 0.2
PNKP-214ENST00000600573 TRIM77I1YAP6 450 aa16.28■□□□□ 0.2
PNKP-214ENST00000600573 F2RL1P55085 397 aa16.28■□□□□ 0.2
PNKP-214ENST00000600573 SPCS3P61009 180 aa16.28■□□□□ 0.2
PNKP-214ENST00000600573 ARF6P62330 175 aa16.28■□□□□ 0.2
PNKP-214ENST00000600573 LILRB2Q8N423 598 aa16.28■□□□□ 0.2
PNKP-214ENST00000600573 C10orf105Q8TEF2 133 aa16.28■□□□□ 0.2
PNKP-214ENST00000600573 FLYWCH2Q96CP2 140 aaKnown RBP16.28■□□□□ 0.2
PNKP-214ENST00000600573 CLCC1Q96S66 551 aa16.28■□□□□ 0.2
PNKP-214ENST00000600573 WASHC3Q9Y3C0 194 aa16.28■□□□□ 0.2
PNKP-214ENST00000600573 UMAD1C9J7I0 102 aa16.27■□□□□ 0.2
PNKP-214ENST00000600573 CAMLGP49069 296 aa16.27■□□□□ 0.2
PNKP-214ENST00000600573 PJVKQ0ZLH3 352 aa16.27■□□□□ 0.2
PNKP-214ENST00000600573 MALRD1Q5VYJ5 2156 aa16.27■□□□□ 0.2
PNKP-214ENST00000600573 SLC25A24Q6NUK1 477 aa16.27■□□□□ 0.2
PNKP-214ENST00000600573 TMEM182Q6ZP80 229 aaPredicted RBP16.27■□□□□ 0.2
PNKP-214ENST00000600573 HAPLN4Q86UW8 402 aa16.27■□□□□ 0.2
PNKP-214ENST00000600573 OR4A5Q8NH83 315 aa16.27■□□□□ 0.2
PNKP-214ENST00000600573 VSTM2AQ8TAG5 236 aa16.27■□□□□ 0.2
PNKP-214ENST00000600573 LINC00052Q96N35 136 aa16.27■□□□□ 0.2
PNKP-214ENST00000600573 OR4C12Q96R67 309 aa16.27■□□□□ 0.2
PNKP-214ENST00000600573 HRH4Q9H3N8 390 aa16.27■□□□□ 0.2
PNKP-214ENST00000600573 FKBP11Q9NYL4 201 aa16.27■□□□□ 0.2
PNKP-214ENST00000600573 ZNRD1Q9P1U0 126 aa16.27■□□□□ 0.2
PNKP-214ENST00000600573 NUP50Q9UKX7 468 aa16.27■□□□□ 0.2
PNKP-214ENST00000600573 H7C2Y5 167 aa16.27■□□□□ 0.19
PNKP-214ENST00000600573 J3QKU1 62 aa16.27■□□□□ 0.19
PNKP-214ENST00000600573 SHOXO15266 292 aa16.27■□□□□ 0.19
PNKP-214ENST00000600573 IFNA17P01571 189 aa16.27■□□□□ 0.19
PNKP-214ENST00000600573 PRH1P02810 166 aa16.27■□□□□ 0.19
PNKP-214ENST00000600573 IL6RP08887 468 aaPredicted RBP16.27■□□□□ 0.19
PNKP-214ENST00000600573 CEACAM3P40198 252 aa16.27■□□□□ 0.19
PNKP-214ENST00000600573 RPP30P78346 268 aaKnown RBP16.27■□□□□ 0.19
PNKP-214ENST00000600573 RELBQ01201 579 aa16.27■□□□□ 0.19
PNKP-214ENST00000600573 SLC38A11Q08AI6 406 aa16.27■□□□□ 0.19
PNKP-214ENST00000600573 BTNL8Q6UX41 500 aa16.27■□□□□ 0.19
PNKP-214ENST00000600573 OR2G3Q8NGZ4 309 aa16.27■□□□□ 0.19
PNKP-214ENST00000600573 ZDHHC16Q969W1 377 aa16.27■□□□□ 0.19
PNKP-214ENST00000600573 PARD6GQ9BYG4 376 aaPredicted RBP16.27■□□□□ 0.19
PNKP-214ENST00000600573 BET1LQ9NYM9 111 aa16.27■□□□□ 0.19
PNKP-214ENST00000600573 PRNDQ9UKY0 176 aa16.27■□□□□ 0.19
PNKP-214ENST00000600573 FASNP49327 2511 aaKnown RBP16.26■□□□□ 0.19
PNKP-214ENST00000600573 IGHV2-70DA0A0C4DH43 119 aa16.26■□□□□ 0.19
PNKP-214ENST00000600573 A1L4Q6 167 aa16.26■□□□□ 0.19
PNKP-214ENST00000600573 VWC2LB2RUY7 222 aa16.26■□□□□ 0.19
PNKP-214ENST00000600573 LGALS7P47929 136 aa16.26■□□□□ 0.19
PNKP-214ENST00000600573 PAX2Q02962 417 aa16.26■□□□□ 0.19
PNKP-214ENST00000600573 ARL16Q0P5N6 197 aa16.26■□□□□ 0.19
PNKP-214ENST00000600573 OR4A47Q6IF82 309 aa16.26■□□□□ 0.19
PNKP-214ENST00000600573 VKORC1L1Q8N0U8 176 aa16.26■□□□□ 0.19
PNKP-214ENST00000600573 PNKDQ8N490 385 aa16.26■□□□□ 0.19
PNKP-214ENST00000600573 SCGB1C1Q8TD33 95 aa16.26■□□□□ 0.19
PNKP-214ENST00000600573 FOXA2Q9Y261 457 aaPredicted RBP16.26■□□□□ 0.19
PNKP-214ENST00000600573 INSIG2Q9Y5U4 225 aa16.26■□□□□ 0.19
PNKP-214ENST00000600573 DOCK11Q5JSL3 2073 aa16.26■□□□□ 0.19
PNKP-214ENST00000600573 C15orf61A6NNL5 157 aa16.25■□□□□ 0.19
PNKP-214ENST00000600573 ZFP36P26651 326 aaKnown RBP16.25■□□□□ 0.19
PNKP-214ENST00000600573 HTR1DP28221 377 aa16.25■□□□□ 0.19
PNKP-214ENST00000600573 OR4P4Q8NGL7 312 aa16.25■□□□□ 0.19
PNKP-214ENST00000600573 RPEQ96AT9 228 aa16.25■□□□□ 0.19
PNKP-214ENST00000600573 RNF5Q99942 180 aa16.25■□□□□ 0.19
PNKP-214ENST00000600573 ZNF257Q9Y2Q1 563 aa16.25■□□□□ 0.19
PNKP-214ENST00000600573 BAHCC1Q9P281 2608 aa16.25■□□□□ 0.19
PNKP-214ENST00000600573 LRBAP50851 2863 aa16.24■□□□□ 0.19
PNKP-214ENST00000600573 LY6LH3BQJ8 138 aa16.24■□□□□ 0.19
PNKP-214ENST00000600573 COX7A1P24310 79 aa16.24■□□□□ 0.19
PNKP-214ENST00000600573 ZNF616Q08AN1 781 aa16.24■□□□□ 0.19
PNKP-214ENST00000600573 ATP6V1FQ16864 119 aa16.24■□□□□ 0.19
PNKP-214ENST00000600573 COMMD1Q8N668 190 aa16.24■□□□□ 0.19
PNKP-214ENST00000600573 LYPD6BQ8NI32 183 aa16.24■□□□□ 0.19
PNKP-214ENST00000600573 DPM3Q9P2X0 92 aa16.24■□□□□ 0.19
PNKP-214ENST00000600573 FLNCQ14315 2725 aa16.23■□□□□ 0.19
PNKP-214ENST00000600573 OOSP1A8MZH6 123 aa16.23■□□□□ 0.19
PNKP-214ENST00000600573 UPK2O00526 184 aa16.23■□□□□ 0.19
PNKP-214ENST00000600573 IGKV1-16P04430 117 aa16.23■□□□□ 0.19
PNKP-214ENST00000600573 ARG1P05089 322 aa16.23■□□□□ 0.19
PNKP-214ENST00000600573 OR8U8P0C7N1 319 aa16.23■□□□□ 0.19
PNKP-214ENST00000600573 HSPE1P61604 102 aaKnown RBP16.23■□□□□ 0.19
PNKP-214ENST00000600573 SPINK9Q5DT21 86 aa16.23■□□□□ 0.19
PNKP-214ENST00000600573 OR8G2PQ6IF36 304 aa16.23■□□□□ 0.19
PNKP-214ENST00000600573 PUSL1Q8N0Z8 303 aaKnown RBP16.23■□□□□ 0.19
PNKP-214ENST00000600573 BPIFCQ8NFQ6 507 aa16.23■□□□□ 0.19
PNKP-214ENST00000600573 PINX1Q96BK5 328 aaKnown RBP16.23■□□□□ 0.19
PNKP-214ENST00000600573 HARBI1Q96MB7 349 aa16.23■□□□□ 0.19
PNKP-214ENST00000600573 TMEM147Q9BVK8 224 aa16.23■□□□□ 0.19
PNKP-214ENST00000600573 HIPK2Q9H2X6 1198 aa16.23■□□□□ 0.19
PNKP-214ENST00000600573 TMEM14BQ9NUH8 114 aa16.23■□□□□ 0.19
PNKP-214ENST00000600573 TET2Q6N021 2002 aaPredicted RBP16.23■□□□□ 0.19
PNKP-214ENST00000600573 USP9XQ93008 2570 aaPredicted RBP16.23■□□□□ 0.19
PNKP-214ENST00000600573 REG1BP48304 166 aa16.23■□□□□ 0.19
PNKP-214ENST00000600573 RUNX1Q01196 453 aa16.23■□□□□ 0.19
PNKP-214ENST00000600573 AKR1C8PQ5T2L2 129 aa16.23■□□□□ 0.19
PNKP-214ENST00000600573 MINOS1Q5TGZ0 78 aa16.23■□□□□ 0.19
PNKP-214ENST00000600573 FAM213BQ8TBF2 198 aa16.23■□□□□ 0.19
PNKP-214ENST00000600573 NARS2Q96I59 477 aaKnown RBP16.23■□□□□ 0.19
PNKP-214ENST00000600573 TCF19Q9Y242 345 aa16.23■□□□□ 0.19
PNKP-214ENST00000600573 MINOS1-NBL1R4GNA1 71 aa16.23■□□□□ 0.19
PNKP-214ENST00000600573 TRAV3A0A0B4J244 114 aa16.22■□□□□ 0.19
PNKP-214ENST00000600573 IGHV1-3A0A0C4DH29 117 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms