RNA–Protein interactions for RNA: ENST00000599322.5

LIG1-218, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-218ENST00000599322 SAP30O75446 220 aa10.95□□□□□ -0.66
LIG1-218ENST00000599322 TPPPO94811 219 aa10.95□□□□□ -0.66
LIG1-218ENST00000599322 KBTBD11O94819 623 aa10.95□□□□□ -0.66
LIG1-218ENST00000599322 BRI3O95415 125 aa10.95□□□□□ -0.66
LIG1-218ENST00000599322 LY86O95711 162 aa10.95□□□□□ -0.66
LIG1-218ENST00000599322 IGLV2-14P01704 120 aa10.95□□□□□ -0.66
LIG1-218ENST00000599322 APELAP0DMC3 54 aa10.95□□□□□ -0.66
LIG1-218ENST00000599322 NQO2P16083 231 aa10.95□□□□□ -0.66
LIG1-218ENST00000599322 NAT1P18440 290 aa10.95□□□□□ -0.66
LIG1-218ENST00000599322 RPL27AP46776 148 aaKnown RBP10.95□□□□□ -0.66
LIG1-218ENST00000599322 TAS2R31P59538 309 aa10.95□□□□□ -0.66
LIG1-218ENST00000599322 RPL8P62917 257 aaKnown RBP10.95□□□□□ -0.66
LIG1-218ENST00000599322 CTF1Q16619 201 aa10.95□□□□□ -0.66
LIG1-218ENST00000599322 SSX9Q7RTT3 188 aa10.95□□□□□ -0.66
LIG1-218ENST00000599322 CLVS1Q8IUQ0 354 aaPredicted RBP10.95□□□□□ -0.66
LIG1-218ENST00000599322 DMBX1Q8NFW5 382 aa10.95□□□□□ -0.66
LIG1-218ENST00000599322 OR51H1Q8NH63 302 aa10.95□□□□□ -0.66
LIG1-218ENST00000599322 TMEM167AQ8TBQ9 72 aa10.95□□□□□ -0.66
LIG1-218ENST00000599322 GPX8Q8TED1 209 aa10.95□□□□□ -0.66
LIG1-218ENST00000599322 RAB2BQ8WUD1 216 aa10.95□□□□□ -0.66
LIG1-218ENST00000599322 MOB3AQ96BX8 217 aa10.95□□□□□ -0.66
LIG1-218ENST00000599322 FYTTD1Q96QD9 318 aaKnown RBP10.95□□□□□ -0.66
LIG1-218ENST00000599322 ALX4Q9H161 411 aaPredicted RBP10.95□□□□□ -0.66
LIG1-218ENST00000599322 IGHV4OR15-8A0A075B7B6 117 aa10.94□□□□□ -0.66
LIG1-218ENST00000599322 A0A087WW49 117 aa10.94□□□□□ -0.66
LIG1-218ENST00000599322 FAM223BA6NKX1 122 aa10.94□□□□□ -0.66
LIG1-218ENST00000599322 GPR31O00270 319 aa10.94□□□□□ -0.66
LIG1-218ENST00000599322 HRH1P35367 487 aa10.94□□□□□ -0.66
LIG1-218ENST00000599322 KRTAP10-11P60412 298 aa10.94□□□□□ -0.66
LIG1-218ENST00000599322 ATP5G2Q06055 141 aa10.94□□□□□ -0.66
LIG1-218ENST00000599322 ZNF818PQ6ZRF7 136 aa10.94□□□□□ -0.66
LIG1-218ENST00000599322 FAM223AQ8IWN6 122 aa10.94□□□□□ -0.66
LIG1-218ENST00000599322 VKORC1L1Q8N0U8 176 aa10.94□□□□□ -0.66
LIG1-218ENST00000599322 BCL7BQ9BQE9 202 aa10.94□□□□□ -0.66
LIG1-218ENST00000599322 COMMD5Q9GZQ3 224 aa10.94□□□□□ -0.66
LIG1-218ENST00000599322 NAA50Q9GZZ1 169 aaKnown RBP10.94□□□□□ -0.66
LIG1-218ENST00000599322 PLEKHA2Q9HB19 425 aa10.94□□□□□ -0.66
LIG1-218ENST00000599322 EXTL2Q9UBQ6 330 aa10.94□□□□□ -0.66
LIG1-218ENST00000599322 PEF1Q9UBV8 284 aaKnown RBP10.94□□□□□ -0.66
LIG1-218ENST00000599322 ANAPC10Q9UM13 185 aa10.94□□□□□ -0.66
LIG1-218ENST00000599322 ANKRD34BA5PLL1 514 aa10.93□□□□□ -0.66
LIG1-218ENST00000599322 DEFA4P12838 97 aa10.93□□□□□ -0.66
LIG1-218ENST00000599322 HLA-GP17693 338 aa10.93□□□□□ -0.66
LIG1-218ENST00000599322 ALDH3B2P48448 385 aa10.93□□□□□ -0.66
LIG1-218ENST00000599322 SLURP1P55000 103 aa10.93□□□□□ -0.66
LIG1-218ENST00000599322 EIF4EBP1Q13541 118 aaPredicted RBP10.93□□□□□ -0.66
LIG1-218ENST00000599322 PUSL1Q8N0Z8 303 aaKnown RBP10.93□□□□□ -0.66
LIG1-218ENST00000599322 TTC9CQ8N5M4 171 aa10.93□□□□□ -0.66
LIG1-218ENST00000599322 OR6Q1Q8NGQ2 317 aa10.93□□□□□ -0.66
LIG1-218ENST00000599322 FCAMRQ8WWV6 532 aa10.93□□□□□ -0.66
LIG1-218ENST00000599322 DLX4Q92988 240 aaPredicted RBP10.93□□□□□ -0.66
LIG1-218ENST00000599322 BET1LQ9NYM9 111 aa10.93□□□□□ -0.66
LIG1-218ENST00000599322 COMMD9Q9P000 198 aa10.93□□□□□ -0.66
LIG1-218ENST00000599322 RABL2AQ9UBK7 228 aaPredicted RBP10.93□□□□□ -0.66
LIG1-218ENST00000599322 RABL2BQ9UNT1 228 aa10.93□□□□□ -0.66
LIG1-218ENST00000599322 ZNF257Q9Y2Q1 563 aa10.93□□□□□ -0.66
LIG1-218ENST00000599322 WI2-2373I1.2A0A1W2PRP0 233 aa10.92□□□□□ -0.66
LIG1-218ENST00000599322 K7EIL1 84 aa10.92□□□□□ -0.66
LIG1-218ENST00000599322 PGLYRP1O75594 196 aaPredicted RBP10.92□□□□□ -0.66
LIG1-218ENST00000599322 SNAPC5O75971 98 aa10.92□□□□□ -0.66
LIG1-218ENST00000599322 RLN1P04808 185 aa10.92□□□□□ -0.66
LIG1-218ENST00000599322 HIST1H1BP16401 226 aaKnown RBP10.92□□□□□ -0.66
LIG1-218ENST00000599322 F2RP25116 425 aa10.92□□□□□ -0.66
LIG1-218ENST00000599322 GNRHRP30968 328 aa10.92□□□□□ -0.66
LIG1-218ENST00000599322 RPL5P46777 297 aaKnown RBP10.92□□□□□ -0.66
LIG1-218ENST00000599322 TMBIM6P55061 237 aa10.92□□□□□ -0.66
LIG1-218ENST00000599322 SSBP2P81877 361 aaPredicted RBP10.92□□□□□ -0.66
LIG1-218ENST00000599322 RHOGP84095 191 aa10.92□□□□□ -0.66
LIG1-218ENST00000599322 CD69Q07108 199 aa10.92□□□□□ -0.66
LIG1-218ENST00000599322 RPEL1Q2QD12 228 aa10.92□□□□□ -0.66
LIG1-218ENST00000599322 RNASE10Q5GAN6 216 aaKnown RBP10.92□□□□□ -0.66
LIG1-218ENST00000599322 OR4A47Q6IF82 309 aa10.92□□□□□ -0.66
LIG1-218ENST00000599322 NECAP1Q8NC96 275 aa10.92□□□□□ -0.66
LIG1-218ENST00000599322 ADAD2Q8NCV1 583 aaKnown RBP10.92□□□□□ -0.66
LIG1-218ENST00000599322 GPHA2Q96T91 129 aa10.92□□□□□ -0.66
LIG1-218ENST00000599322 ZNF256Q9Y2P7 627 aaPredicted RBP10.92□□□□□ -0.66
LIG1-218ENST00000599322 TBPP20226 339 aa10.91□□□□□ -0.66
LIG1-218ENST00000599322 MRPS10P82664 201 aaKnown RBP10.91□□□□□ -0.66
LIG1-218ENST00000599322 C10orf55Q5SWW7 151 aa10.91□□□□□ -0.66
LIG1-218ENST00000599322 ASPHD1Q5U4P2 390 aa10.91□□□□□ -0.66
LIG1-218ENST00000599322 THOC7Q6I9Y2 204 aaKnown RBP10.91□□□□□ -0.66
LIG1-218ENST00000599322 ZNF343Q6P1L6 599 aa10.91□□□□□ -0.66
LIG1-218ENST00000599322 LYSMD2Q8IV50 215 aa10.91□□□□□ -0.66
LIG1-218ENST00000599322 SLC38A6Q8IZM9 456 aa10.91□□□□□ -0.66
LIG1-218ENST00000599322 DGCR14Q96DF8 476 aaKnown RBP10.91□□□□□ -0.66
LIG1-218ENST00000599322 RSRP1Q9BUV0 290 aa10.91□□□□□ -0.66
LIG1-218ENST00000599322 SLC2A9Q9NRM0 540 aa10.91□□□□□ -0.66
LIG1-218ENST00000599322 THYN1Q9P016 225 aa10.91□□□□□ -0.66
LIG1-218ENST00000599322 KMT2CQ8NEZ4 4911 aaKnown RBP10.91□□□□□ -0.66
LIG1-218ENST00000599322 DNAH9Q9NYC9 4486 aa10.9□□□□□ -0.66
LIG1-218ENST00000599322 HMX3A6NHT5 357 aa10.9□□□□□ -0.66
LIG1-218ENST00000599322 NPIPB5A8MRT5 1133 aa10.9□□□□□ -0.66
LIG1-218ENST00000599322 PGAM2P15259 253 aa10.9□□□□□ -0.66
LIG1-218ENST00000599322 LPAR6P43657 344 aa10.9□□□□□ -0.66
LIG1-218ENST00000599322 POU2AF1Q16633 256 aa10.9□□□□□ -0.66
LIG1-218ENST00000599322 MRGPRG-AS1Q2M3A8 158 aa10.9□□□□□ -0.66
LIG1-218ENST00000599322 PHLDA2Q53GA4 152 aa10.9□□□□□ -0.66
LIG1-218ENST00000599322 RNASE12Q5GAN4 147 aaKnown RBP10.9□□□□□ -0.66
LIG1-218ENST00000599322 VAX1Q5SQQ9 334 aa10.9□□□□□ -0.66
LIG1-218ENST00000599322 ACSM6Q6P461 480 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms