RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-223ENST00000599223 C12orf4Q9NQ89 552 aa11.22□□□□□ -0.61
IRF3-223ENST00000599223 C19orf73Q9NVV2 129 aa11.22□□□□□ -0.61
IRF3-223ENST00000599223 MTFP1Q9UDX5 166 aa11.22□□□□□ -0.61
IRF3-223ENST00000599223 RBMX2Q9Y388 322 aaKnown RBP11.22□□□□□ -0.61
IRF3-223ENST00000599223 hCG_2014768A0A024R1R8 64 aa11.21□□□□□ -0.61
IRF3-223ENST00000599223 TMEM235A6NFC5 223 aa11.21□□□□□ -0.61
IRF3-223ENST00000599223 RBMXL2O75526 392 aaKnown RBP11.21□□□□□ -0.61
IRF3-223ENST00000599223 TRBV12-3P01733 135 aa11.21□□□□□ -0.61
IRF3-223ENST00000599223 HIST1H1DP16402 221 aaKnown RBP11.21□□□□□ -0.61
IRF3-223ENST00000599223 TMEM50BP56557 158 aa11.21□□□□□ -0.61
IRF3-223ENST00000599223 TAS2R19P59542 299 aa11.21□□□□□ -0.61
IRF3-223ENST00000599223 FXYD3Q14802 87 aa11.21□□□□□ -0.61
IRF3-223ENST00000599223 PLAC9Q5JTB6 97 aa11.21□□□□□ -0.61
IRF3-223ENST00000599223 IL34Q6ZMJ4 242 aa11.21□□□□□ -0.61
IRF3-223ENST00000599223 NRARPQ7Z6K4 114 aa11.21□□□□□ -0.61
IRF3-223ENST00000599223 PDPNQ86YL7 162 aa11.21□□□□□ -0.61
IRF3-223ENST00000599223 TSNAXQ99598 290 aaKnown RBP11.21□□□□□ -0.61
IRF3-223ENST00000599223 RNF5Q99942 180 aa11.21□□□□□ -0.61
IRF3-223ENST00000599223 ZMAT4Q9H898 229 aa11.21□□□□□ -0.61
IRF3-223ENST00000599223 RDH8Q9NYR8 311 aa11.21□□□□□ -0.61
IRF3-223ENST00000599223 ANKRD20A5PA0PJZ0 165 aa11.2□□□□□ -0.62
IRF3-223ENST00000599223 ANKRD34BA5PLL1 514 aa11.2□□□□□ -0.62
IRF3-223ENST00000599223 M0R1X1 148 aa11.2□□□□□ -0.62
IRF3-223ENST00000599223 PLA2G10O15496 165 aa11.2□□□□□ -0.62
IRF3-223ENST00000599223 AKAIN1P0CW23 69 aa11.2□□□□□ -0.62
IRF3-223ENST00000599223 GNB3P16520 340 aa11.2□□□□□ -0.62
IRF3-223ENST00000599223 RPS16P62249 146 aaKnown RBP11.2□□□□□ -0.62
IRF3-223ENST00000599223 KLF9Q13886 244 aaPredicted RBP11.2□□□□□ -0.62
IRF3-223ENST00000599223 MRGPRG-AS1Q2M3A8 158 aa11.2□□□□□ -0.62
IRF3-223ENST00000599223 MOGAT2Q3SYC2 334 aa11.2□□□□□ -0.62
IRF3-223ENST00000599223 OR5T1Q8NG75 326 aa11.2□□□□□ -0.62
IRF3-223ENST00000599223 GPX8Q8TED1 209 aa11.2□□□□□ -0.62
IRF3-223ENST00000599223 PECRQ9BY49 303 aa11.2□□□□□ -0.62
IRF3-223ENST00000599223 RIMS4Q9H426 269 aaPredicted RBP11.2□□□□□ -0.62
IRF3-223ENST00000599223 KLK11Q9UBX7 282 aa11.2□□□□□ -0.62
IRF3-223ENST00000599223 HSF4Q9ULV5 492 aa11.2□□□□□ -0.62
IRF3-223ENST00000599223 A8MZ25 164 aa11.19□□□□□ -0.62
IRF3-223ENST00000599223 PFDN1O60925 122 aa11.19□□□□□ -0.62
IRF3-223ENST00000599223 APOA2P02652 100 aa11.19□□□□□ -0.62
IRF3-223ENST00000599223 CRYGBP07316 175 aa11.19□□□□□ -0.62
IRF3-223ENST00000599223 TMEM229BQ8NBD8 167 aa11.19□□□□□ -0.62
IRF3-223ENST00000599223 ZNF355PQ9NSJ1 428 aa11.19□□□□□ -0.62
IRF3-223ENST00000599223 SLC35D1Q9NTN3 355 aa11.19□□□□□ -0.62
IRF3-223ENST00000599223 MCUBQ9NWR8 336 aa11.19□□□□□ -0.62
IRF3-223ENST00000599223 ZNF221Q9UK13 617 aa11.19□□□□□ -0.62
IRF3-223ENST00000599223 KCNK7Q9Y2U2 307 aa11.19□□□□□ -0.62
IRF3-223ENST00000599223 ALMS1Q8TCU4 4167 aa11.19□□□□□ -0.62
IRF3-223ENST00000599223 A0A1B0GVG6 124 aa11.18□□□□□ -0.62
IRF3-223ENST00000599223 APELAP0DMC3 54 aa11.18□□□□□ -0.62
IRF3-223ENST00000599223 PTHLHP12272 177 aa11.18□□□□□ -0.62
IRF3-223ENST00000599223 TBPP20226 339 aa11.18□□□□□ -0.62
IRF3-223ENST00000599223 ZP3P21754 424 aa11.18□□□□□ -0.62
IRF3-223ENST00000599223 RFX2P48378 723 aa11.18□□□□□ -0.62
IRF3-223ENST00000599223 SYNJ2BPP57105 145 aa11.18□□□□□ -0.62
IRF3-223ENST00000599223 KLF5Q13887 457 aaPredicted RBP11.18□□□□□ -0.62
IRF3-223ENST00000599223 MEF2DQ14814 521 aa11.18□□□□□ -0.62
IRF3-223ENST00000599223 ADAMTSL5Q6ZMM2 481 aa11.18□□□□□ -0.62
IRF3-223ENST00000599223 DUSP18Q8NEJ0 188 aa11.18□□□□□ -0.62
IRF3-223ENST00000599223 OR9G4Q8NGQ1 327 aa11.18□□□□□ -0.62
IRF3-223ENST00000599223 CMSS1Q9BQ75 279 aaKnown RBP11.18□□□□□ -0.62
IRF3-223ENST00000599223 ELOVL1Q9BW60 279 aa11.18□□□□□ -0.62
IRF3-223ENST00000599223 OR2D2Q9H210 308 aa11.18□□□□□ -0.62
IRF3-223ENST00000599223 RANGRFQ9HD47 186 aaPredicted RBP11.18□□□□□ -0.62
IRF3-223ENST00000599223 HRASLSQ9HDD0 168 aa11.18□□□□□ -0.62
IRF3-223ENST00000599223 SDHAF2Q9NX18 166 aa11.18□□□□□ -0.62
IRF3-223ENST00000599223 PLECQ15149 4684 aaKnown RBP11.17□□□□□ -0.62
IRF3-223ENST00000599223 C13orf42A0A1B0GVH6 325 aa11.17□□□□□ -0.62
IRF3-223ENST00000599223 IZUMO1RA6ND01 250 aa11.17□□□□□ -0.62
IRF3-223ENST00000599223 MEIS3P1A6NDR6 274 aa11.17□□□□□ -0.62
IRF3-223ENST00000599223 SRRM4A7MD48 611 aaKnown RBP11.17□□□□□ -0.62
IRF3-223ENST00000599223 TRDCB7Z8K6 153 aa11.17□□□□□ -0.62
IRF3-223ENST00000599223 DISC1C4P0D8 188 aa11.17□□□□□ -0.62
IRF3-223ENST00000599223 H3BUA1 57 aa11.17□□□□□ -0.62
IRF3-223ENST00000599223 MFNGO00587 321 aa11.17□□□□□ -0.62
IRF3-223ENST00000599223 IGSF11Q5DX21 431 aa11.17□□□□□ -0.62
IRF3-223ENST00000599223 STEAP1BQ6NZ63 245 aa11.17□□□□□ -0.62
IRF3-223ENST00000599223 NUDCD2Q8WVJ2 157 aa11.17□□□□□ -0.62
IRF3-223ENST00000599223 MAFIPQ8WZ33 124 aa11.17□□□□□ -0.62
IRF3-223ENST00000599223 HARBI1Q96MB7 349 aa11.17□□□□□ -0.62
IRF3-223ENST00000599223 CABLES2Q9BTV7 478 aa11.17□□□□□ -0.62
IRF3-223ENST00000599223 MGAT4AQ9UM21 535 aa11.17□□□□□ -0.62
IRF3-223ENST00000599223 FABP7O15540 132 aa11.16□□□□□ -0.62
IRF3-223ENST00000599223 CNIH1O95406 144 aa11.16□□□□□ -0.62
IRF3-223ENST00000599223 RAB3DO95716 219 aa11.16□□□□□ -0.62
IRF3-223ENST00000599223 DHFRP00374 187 aa11.16□□□□□ -0.62
IRF3-223ENST00000599223 IFNA6P05013 189 aa11.16□□□□□ -0.62
IRF3-223ENST00000599223 FCGR3AP08637 254 aa11.16□□□□□ -0.62
IRF3-223ENST00000599223 HAGHQ16775 308 aa11.16□□□□□ -0.62
IRF3-223ENST00000599223 RNASE10Q5GAN6 216 aaKnown RBP11.16□□□□□ -0.62
IRF3-223ENST00000599223 SGPP2Q8IWX5 399 aa11.16□□□□□ -0.62
IRF3-223ENST00000599223 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.16□□□□□ -0.62
IRF3-223ENST00000599223 TINAGL1Q9GZM7 467 aaPredicted RBP11.16□□□□□ -0.62
IRF3-223ENST00000599223 RETNQ9HD89 108 aa11.16□□□□□ -0.62
IRF3-223ENST00000599223 SCP2D1Q9UJQ7 156 aa11.16□□□□□ -0.62
IRF3-223ENST00000599223 BET1O15155 118 aa11.15□□□□□ -0.62
IRF3-223ENST00000599223 CSN3P07498 182 aa11.15□□□□□ -0.62
IRF3-223ENST00000599223 GSTT2P0CG29 244 aa11.15□□□□□ -0.62
IRF3-223ENST00000599223 BCAP31P51572 246 aa11.15□□□□□ -0.62
IRF3-223ENST00000599223 TAS2R46P59540 309 aa11.15□□□□□ -0.62
IRF3-223ENST00000599223 ZNF343Q6P1L6 599 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms