RNA–Protein interactions for RNA: ENST00000597618.5

TRIM28-210, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-210ENST00000597618 OR11H2Q8NH07 326 aa7.44□□□□□ -1.22
TRIM28-210ENST00000597618 OR5B3Q8NH48 314 aa7.44□□□□□ -1.22
TRIM28-210ENST00000597618 CD300LFQ8TDQ1 290 aa7.44□□□□□ -1.22
TRIM28-210ENST00000597618 PHYHIPQ92561 330 aa7.44□□□□□ -1.22
TRIM28-210ENST00000597618 TMEM80Q96HE8 168 aa7.44□□□□□ -1.22
TRIM28-210ENST00000597618 KRTAP4-5Q9BYR2 181 aa7.44□□□□□ -1.22
TRIM28-210ENST00000597618 KLK9Q9UKQ9 250 aa7.44□□□□□ -1.22
TRIM28-210ENST00000597618 MFSD2BA6NFX1 497 aa7.43□□□□□ -1.22
TRIM28-210ENST00000597618 LINC00473A8K010 186 aa7.43□□□□□ -1.22
TRIM28-210ENST00000597618 FOXI3A8MTJ6 420 aaPredicted RBP7.43□□□□□ -1.22
TRIM28-210ENST00000597618 IL6RP08887 468 aaPredicted RBP7.43□□□□□ -1.22
TRIM28-210ENST00000597618 CD3GP09693 182 aa7.43□□□□□ -1.22
TRIM28-210ENST00000597618 ZNF735P0CB33 412 aa7.43□□□□□ -1.22
TRIM28-210ENST00000597618 DEFA4P12838 97 aa7.43□□□□□ -1.22
TRIM28-210ENST00000597618 AREGP15514 252 aa7.43□□□□□ -1.22
TRIM28-210ENST00000597618 GPR183P32249 361 aa7.43□□□□□ -1.22
TRIM28-210ENST00000597618 ADMP35318 185 aa7.43□□□□□ -1.22
TRIM28-210ENST00000597618 MAS1LP35410 378 aa7.43□□□□□ -1.22
TRIM28-210ENST00000597618 RPL27AP46776 148 aaKnown RBP7.43□□□□□ -1.22
TRIM28-210ENST00000597618 RASSF2P50749 326 aa7.43□□□□□ -1.22
TRIM28-210ENST00000597618 IGSF11Q5DX21 431 aa7.43□□□□□ -1.22
TRIM28-210ENST00000597618 LRRTM1Q86UE6 522 aa7.43□□□□□ -1.22
TRIM28-210ENST00000597618 OR6M1Q8NGM8 313 aa7.43□□□□□ -1.22
TRIM28-210ENST00000597618 VSTM2AQ8TAG5 236 aa7.43□□□□□ -1.22
TRIM28-210ENST00000597618 TMEM190Q8WZ59 177 aa7.43□□□□□ -1.22
TRIM28-210ENST00000597618 ARHGAP5-AS1Q96IT6 56 aa7.43□□□□□ -1.22
TRIM28-210ENST00000597618 DCUN1D5Q9BTE7 237 aa7.43□□□□□ -1.22
TRIM28-210ENST00000597618 OR51E2Q9H255 320 aa7.43□□□□□ -1.22
TRIM28-210ENST00000597618 DAZ1Q9NQZ3 744 aaKnown RBP7.43□□□□□ -1.22
TRIM28-210ENST00000597618 PLA2G2EQ9NZK7 142 aa7.43□□□□□ -1.22
TRIM28-210ENST00000597618 MRPS7Q9Y2R9 242 aaKnown RBP7.43□□□□□ -1.22
TRIM28-210ENST00000597618 IGLV11-55A0A075B6I3 123 aa7.42□□□□□ -1.22
TRIM28-210ENST00000597618 EFCAB10A6NFE3 127 aa7.42□□□□□ -1.22
TRIM28-210ENST00000597618 FCGR3BO75015 233 aa7.42□□□□□ -1.22
TRIM28-210ENST00000597618 KBTBD11O94819 623 aa7.42□□□□□ -1.22
TRIM28-210ENST00000597618 TMEM50BP56557 158 aa7.42□□□□□ -1.22
TRIM28-210ENST00000597618 ARFRP1Q13795 201 aa7.42□□□□□ -1.22
TRIM28-210ENST00000597618 PLET1Q6UQ28 207 aa7.42□□□□□ -1.22
TRIM28-210ENST00000597618 NR2C2APQ86WQ0 139 aa7.42□□□□□ -1.22
TRIM28-210ENST00000597618 OR4A5Q8NH83 315 aa7.42□□□□□ -1.22
TRIM28-210ENST00000597618 ZNF502Q8TBZ5 544 aa7.42□□□□□ -1.22
TRIM28-210ENST00000597618 OR2A7Q96R45 310 aa7.42□□□□□ -1.22
TRIM28-210ENST00000597618 GINS4Q9BRT9 223 aa7.42□□□□□ -1.22
TRIM28-210ENST00000597618 C9orf16Q9BUW7 83 aa7.42□□□□□ -1.22
TRIM28-210ENST00000597618 PECRQ9BY49 303 aa7.42□□□□□ -1.22
TRIM28-210ENST00000597618 ZNF436Q9C0F3 470 aaPredicted RBP7.42□□□□□ -1.22
TRIM28-210ENST00000597618 HRH4Q9H3N8 390 aa7.42□□□□□ -1.22
TRIM28-210ENST00000597618 PRELID3BQ9Y3B1 194 aa7.42□□□□□ -1.22
TRIM28-210ENST00000597618 IGHV3-35A0A0C4DH35 117 aa7.41□□□□□ -1.22
TRIM28-210ENST00000597618 MYL12BO14950 172 aa7.41□□□□□ -1.22
TRIM28-210ENST00000597618 RTL8CO15255 209 aa7.41□□□□□ -1.22
TRIM28-210ENST00000597618 DEFB4AO15263 64 aa7.41□□□□□ -1.22
TRIM28-210ENST00000597618 CDK1P06493 297 aa7.41□□□□□ -1.22
TRIM28-210ENST00000597618 FCGR3AP08637 254 aa7.41□□□□□ -1.22
TRIM28-210ENST00000597618 PSMD7P51665 324 aa7.41□□□□□ -1.22
TRIM28-210ENST00000597618 CMC4P56277 68 aaPredicted RBP7.41□□□□□ -1.22
TRIM28-210ENST00000597618 WNT4P56705 351 aa7.41□□□□□ -1.22
TRIM28-210ENST00000597618 INSL4Q14641 139 aa7.41□□□□□ -1.22
TRIM28-210ENST00000597618 P2RY14Q15391 338 aa7.41□□□□□ -1.22
TRIM28-210ENST00000597618 SSX1Q16384 188 aa7.41□□□□□ -1.22
TRIM28-210ENST00000597618 ACSM3Q53FZ2 586 aa7.41□□□□□ -1.22
TRIM28-210ENST00000597618 ZFP1Q6P2D0 407 aa7.41□□□□□ -1.22
TRIM28-210ENST00000597618 KCTD9Q7L273 389 aa7.41□□□□□ -1.22
TRIM28-210ENST00000597618 APRG1Q8IVJ8 170 aa7.41□□□□□ -1.22
TRIM28-210ENST00000597618 VKORC1L1Q8N0U8 176 aa7.41□□□□□ -1.22
TRIM28-210ENST00000597618 ZNF555Q8NEP9 628 aa7.41□□□□□ -1.22
TRIM28-210ENST00000597618 OR56B1Q8NGI3 324 aa7.41□□□□□ -1.22
TRIM28-210ENST00000597618 TMEM167AQ8TBQ9 72 aa7.41□□□□□ -1.22
TRIM28-210ENST00000597618 CENPOQ9BU64 300 aa7.41□□□□□ -1.22
TRIM28-210ENST00000597618 IGHV4-4A0A075B6R2 117 aa7.4□□□□□ -1.22
TRIM28-210ENST00000597618 A0A1B0GW64 132 aa7.4□□□□□ -1.22
TRIM28-210ENST00000597618 ERICH4A6NGS2 130 aa7.4□□□□□ -1.22
TRIM28-210ENST00000597618 E7EUB6 86 aa7.4□□□□□ -1.22
TRIM28-210ENST00000597618 TGOLN2O43493 480 aa7.4□□□□□ -1.22
TRIM28-210ENST00000597618 CD37P11049 281 aa7.4□□□□□ -1.22
TRIM28-210ENST00000597618 CD36P16671 472 aa7.4□□□□□ -1.22
TRIM28-210ENST00000597618 PTBP1P26599 531 aaKnown RBP eCLIP7.4□□□□□ -1.22
TRIM28-210ENST00000597618 ST3GAL4Q11206 333 aa7.4□□□□□ -1.22
TRIM28-210ENST00000597618 IRF3Q14653 427 aa7.4□□□□□ -1.22
TRIM28-210ENST00000597618 HSD17B12Q53GQ0 312 aa7.4□□□□□ -1.22
TRIM28-210ENST00000597618 PLAC9Q5JTB6 97 aa7.4□□□□□ -1.22
TRIM28-210ENST00000597618 H1FOOQ8IZA3 346 aaPredicted RBP7.4□□□□□ -1.22
TRIM28-210ENST00000597618 PUSL1Q8N0Z8 303 aaKnown RBP7.4□□□□□ -1.22
TRIM28-210ENST00000597618 CENPSQ8N2Z9 138 aa7.4□□□□□ -1.22
TRIM28-210ENST00000597618 MS4A15Q8N5U1 240 aa7.4□□□□□ -1.22
TRIM28-210ENST00000597618 ZNF645Q8N7E2 425 aa7.4□□□□□ -1.22
TRIM28-210ENST00000597618 OR4S2Q8NH73 311 aa7.4□□□□□ -1.22
TRIM28-210ENST00000597618 PLGRKTQ9HBL7 147 aa7.4□□□□□ -1.22
TRIM28-210ENST00000597618 THYN1Q9P016 225 aa7.4□□□□□ -1.22
TRIM28-210ENST00000597618 LRP1BQ9NZR2 4599 aa7.39□□□□□ -1.23
TRIM28-210ENST00000597618 TRAV10A0A0B4J240 114 aa7.39□□□□□ -1.23
TRIM28-210ENST00000597618 NDUFA4O00483 81 aa7.39□□□□□ -1.23
TRIM28-210ENST00000597618 SLC17A2O00624 439 aa7.39□□□□□ -1.23
TRIM28-210ENST00000597618 ATP5HO75947 161 aa7.39□□□□□ -1.23
TRIM28-210ENST00000597618 CA1P00915 261 aaPredicted RBP7.39□□□□□ -1.23
TRIM28-210ENST00000597618 REG1AP05451 166 aa7.39□□□□□ -1.23
TRIM28-210ENST00000597618 CTSDP07339 412 aaPredicted RBP7.39□□□□□ -1.23
TRIM28-210ENST00000597618 RPA2P15927 270 aa7.39□□□□□ -1.23
TRIM28-210ENST00000597618 CRHBPP24387 322 aa7.39□□□□□ -1.23
TRIM28-210ENST00000597618 RPL8P62917 257 aaKnown RBP7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms