RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 ACSM6Q6P461 480 aa10.04□□□□□ -0.8
USE1-207ENST00000596136 MZT2AQ6P582 158 aa10.04□□□□□ -0.8
USE1-207ENST00000596136 ZNF429Q86V71 674 aa10.04□□□□□ -0.8
USE1-207ENST00000596136 VKORC1L1Q8N0U8 176 aa10.04□□□□□ -0.8
USE1-207ENST00000596136 OR5H2Q8NGV7 314 aa10.04□□□□□ -0.8
USE1-207ENST00000596136 CD300LFQ8TDQ1 290 aa10.04□□□□□ -0.8
USE1-207ENST00000596136 AP3S1Q92572 193 aa10.04□□□□□ -0.8
USE1-207ENST00000596136 PHB2Q99623 299 aa10.04□□□□□ -0.8
USE1-207ENST00000596136 ZNF2Q9BSG1 426 aaPredicted RBP10.04□□□□□ -0.8
USE1-207ENST00000596136 RANGRFQ9HD47 186 aaPredicted RBP10.04□□□□□ -0.8
USE1-207ENST00000596136 BET1LQ9NYM9 111 aa10.04□□□□□ -0.8
USE1-207ENST00000596136 KLK9Q9UKQ9 250 aa10.04□□□□□ -0.8
USE1-207ENST00000596136 A0A1B0GW64 132 aa10.03□□□□□ -0.8
USE1-207ENST00000596136 TEX22C9J3V5 150 aa10.03□□□□□ -0.8
USE1-207ENST00000596136 PMP2P02689 132 aa10.03□□□□□ -0.8
USE1-207ENST00000596136 ZNF735P0CB33 412 aa10.03□□□□□ -0.8
USE1-207ENST00000596136 HRH1P35367 487 aa10.03□□□□□ -0.8
USE1-207ENST00000596136 DCTN2Q13561 401 aaKnown RBP10.03□□□□□ -0.8
USE1-207ENST00000596136 C10orf55Q5SWW7 151 aa10.03□□□□□ -0.8
USE1-207ENST00000596136 GPR141Q7Z602 305 aa10.03□□□□□ -0.8
USE1-207ENST00000596136 CADM3Q8N126 398 aa10.03□□□□□ -0.8
USE1-207ENST00000596136 OR6F1Q8NGZ6 308 aa10.03□□□□□ -0.8
USE1-207ENST00000596136 OR4A5Q8NH83 315 aa10.03□□□□□ -0.8
USE1-207ENST00000596136 PLEKHA2Q9HB19 425 aa10.03□□□□□ -0.8
USE1-207ENST00000596136 COA4Q9NYJ1 87 aa10.03□□□□□ -0.8
USE1-207ENST00000596136 LSM4Q9Y4Z0 139 aaKnown RBP10.03□□□□□ -0.8
USE1-207ENST00000596136 FAM223BA6NKX1 122 aa10.02□□□□□ -0.81
USE1-207ENST00000596136 E7EUB6 86 aa10.02□□□□□ -0.81
USE1-207ENST00000596136 PGLYRP1O75594 196 aaPredicted RBP10.02□□□□□ -0.81
USE1-207ENST00000596136 APELAP0DMC3 54 aa10.02□□□□□ -0.81
USE1-207ENST00000596136 NQO2P16083 231 aa10.02□□□□□ -0.81
USE1-207ENST00000596136 ZP3P21754 424 aa10.02□□□□□ -0.81
USE1-207ENST00000596136 HLA-DMAP28067 261 aa10.02□□□□□ -0.81
USE1-207ENST00000596136 RCVRNP35243 200 aa10.02□□□□□ -0.81
USE1-207ENST00000596136 RPL27AP46776 148 aaKnown RBP10.02□□□□□ -0.81
USE1-207ENST00000596136 ZNF45Q02386 682 aa10.02□□□□□ -0.81
USE1-207ENST00000596136 KLF5Q13887 457 aaPredicted RBP10.02□□□□□ -0.81
USE1-207ENST00000596136 OR4A47Q6IF82 309 aa10.02□□□□□ -0.81
USE1-207ENST00000596136 SLC25A42Q86VD7 318 aa10.02□□□□□ -0.81
USE1-207ENST00000596136 TMEM17Q86X19 198 aa10.02□□□□□ -0.81
USE1-207ENST00000596136 SNX29P2Q8IUI4 249 aa10.02□□□□□ -0.81
USE1-207ENST00000596136 FAM223AQ8IWN6 122 aa10.02□□□□□ -0.81
USE1-207ENST00000596136 SLC2A9Q9NRM0 540 aa10.02□□□□□ -0.81
USE1-207ENST00000596136 NPIPB5A8MRT5 1133 aa10.01□□□□□ -0.81
USE1-207ENST00000596136 MPPED1O15442 326 aa10.01□□□□□ -0.81
USE1-207ENST00000596136 CRYGCP07315 174 aa10.01□□□□□ -0.81
USE1-207ENST00000596136 F2RP25116 425 aa10.01□□□□□ -0.81
USE1-207ENST00000596136 ECI1P42126 302 aa10.01□□□□□ -0.81
USE1-207ENST00000596136 UCP3P55916 312 aa10.01□□□□□ -0.81
USE1-207ENST00000596136 RPL8P62917 257 aaKnown RBP10.01□□□□□ -0.81
USE1-207ENST00000596136 DEFB121Q5J5C9 76 aa10.01□□□□□ -0.81
USE1-207ENST00000596136 VAX1Q5SQQ9 334 aa10.01□□□□□ -0.81
USE1-207ENST00000596136 B9D2Q9BPU9 175 aa10.01□□□□□ -0.81
USE1-207ENST00000596136 BCL7BQ9BQE9 202 aa10.01□□□□□ -0.81
USE1-207ENST00000596136 FXYD6Q9H0Q3 95 aa10.01□□□□□ -0.81
USE1-207ENST00000596136 AKIP1Q9NQ31 210 aa10.01□□□□□ -0.81
USE1-207ENST00000596136 FAM212BQ9NTI7 297 aaPredicted RBP10.01□□□□□ -0.81
USE1-207ENST00000596136 COMMD9Q9P000 198 aa10.01□□□□□ -0.81
USE1-207ENST00000596136 PEF1Q9UBV8 284 aaKnown RBP10.01□□□□□ -0.81
USE1-207ENST00000596136 ZNF257Q9Y2Q1 563 aa10.01□□□□□ -0.81
USE1-207ENST00000596136 HMX3A6NHT5 357 aa10□□□□□ -0.81
USE1-207ENST00000596136 CGB1A6NKQ9 187 aa10□□□□□ -0.81
USE1-207ENST00000596136 FAM25AB3EWG3 89 aa10□□□□□ -0.81
USE1-207ENST00000596136 FAM25CB3EWG5 89 aa10□□□□□ -0.81
USE1-207ENST00000596136 FAM25GB3EWG6 89 aa10□□□□□ -0.81
USE1-207ENST00000596136 GPR31O00270 319 aa10□□□□□ -0.81
USE1-207ENST00000596136 UPK2O00526 184 aa10□□□□□ -0.81
USE1-207ENST00000596136 HLA-GP17693 338 aa10□□□□□ -0.81
USE1-207ENST00000596136 TMBIM6P55061 237 aa10□□□□□ -0.81
USE1-207ENST00000596136 RHOGP84095 191 aa10□□□□□ -0.81
USE1-207ENST00000596136 SPCS2Q15005 226 aa10□□□□□ -0.81
USE1-207ENST00000596136 AADACL3Q5VUY0 350 aa10□□□□□ -0.81
USE1-207ENST00000596136 LPCAT3Q6P1A2 487 aa10□□□□□ -0.81
USE1-207ENST00000596136 SSX9Q7RTT3 188 aa10□□□□□ -0.81
USE1-207ENST00000596136 CMTM1Q8IZ96 169 aa10□□□□□ -0.81
USE1-207ENST00000596136 NECAP1Q8NC96 275 aa10□□□□□ -0.81
USE1-207ENST00000596136 OR51H1Q8NH63 302 aa10□□□□□ -0.81
USE1-207ENST00000596136 RAB2BQ8WUD1 216 aa10□□□□□ -0.81
USE1-207ENST00000596136 DGCR14Q96DF8 476 aaKnown RBP10□□□□□ -0.81
USE1-207ENST00000596136 ABHD1Q96SE0 405 aa10□□□□□ -0.81
USE1-207ENST00000596136 RSRP1Q9BUV0 290 aa10□□□□□ -0.81
USE1-207ENST00000596136 MIXL1Q9H2W2 232 aa10□□□□□ -0.81
USE1-207ENST00000596136 MTFP1Q9UDX5 166 aa10□□□□□ -0.81
USE1-207ENST00000596136 ZNF256Q9Y2P7 627 aaPredicted RBP10□□□□□ -0.81
USE1-207ENST00000596136 ANKRD34BA5PLL1 514 aa9.99□□□□□ -0.81
USE1-207ENST00000596136 SAP30O75446 220 aa9.99□□□□□ -0.81
USE1-207ENST00000596136 S1PR2O95136 353 aa9.99□□□□□ -0.81
USE1-207ENST00000596136 TRBV12-3P01733 135 aa9.99□□□□□ -0.81
USE1-207ENST00000596136 PRH1P02810 166 aa9.99□□□□□ -0.81
USE1-207ENST00000596136 CTRB1P17538 263 aa9.99□□□□□ -0.81
USE1-207ENST00000596136 PSMB6P28072 239 aa9.99□□□□□ -0.81
USE1-207ENST00000596136 OR2B8PP59922 312 aa9.99□□□□□ -0.81
USE1-207ENST00000596136 TSPAN5P62079 268 aa9.99□□□□□ -0.81
USE1-207ENST00000596136 DEFA5Q01523 94 aa9.99□□□□□ -0.81
USE1-207ENST00000596136 ATP5G2Q06055 141 aa9.99□□□□□ -0.81
USE1-207ENST00000596136 ZNF585BQ52M93 769 aa9.99□□□□□ -0.81
USE1-207ENST00000596136 FAM209BQ5JX69 171 aa9.99□□□□□ -0.81
USE1-207ENST00000596136 CTRB2Q6GPI1 263 aa9.99□□□□□ -0.81
USE1-207ENST00000596136 IL34Q6ZMJ4 242 aa9.99□□□□□ -0.81
USE1-207ENST00000596136 C15orf40Q8WUR7 153 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms