RNA–Protein interactions for RNA: ENST00000592790.1

VMP1-216, Transcript of vacuole membrane protein 1, humanhuman

Gene VMP1, Length 4,325 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-216ENST00000592790 PERPQ96FX8 193 aa2.99□□□□□ -1.93
VMP1-216ENST00000592790 PLPPR2Q96GM1 343 aa2.99□□□□□ -1.93
VMP1-216ENST00000592790 LRFN3Q9BTN0 628 aa2.99□□□□□ -1.93
VMP1-216ENST00000592790 ABHD14AQ9BUJ0 271 aa2.99□□□□□ -1.93
VMP1-216ENST00000592790 PLSCR4Q9NRQ2 329 aa2.99□□□□□ -1.93
VMP1-216ENST00000592790 CLCF1Q9UBD9 225 aa2.99□□□□□ -1.93
VMP1-216ENST00000592790 HS3ST3B1Q9Y662 390 aa2.99□□□□□ -1.93
VMP1-216ENST00000592790 IGKV1D-13A0A0B4J2D9 117 aa2.99□□□□□ -1.93
VMP1-216ENST00000592790 CDIPTO14735 213 aa2.99□□□□□ -1.93
VMP1-216ENST00000592790 ZG16O60844 167 aa2.99□□□□□ -1.93
VMP1-216ENST00000592790 RNF224P0DH78 156 aa2.99□□□□□ -1.93
VMP1-216ENST00000592790 IGKV1-13P0DP09 117 aa2.99□□□□□ -1.93
VMP1-216ENST00000592790 MEOX1P50221 254 aa2.99□□□□□ -1.93
VMP1-216ENST00000592790 MRPS11P82912 194 aaKnown RBP2.99□□□□□ -1.93
VMP1-216ENST00000592790 RIGQ13278 110 aa2.99□□□□□ -1.93
VMP1-216ENST00000592790 LINC00696Q6ZRV3 163 aa2.99□□□□□ -1.93
VMP1-216ENST00000592790 FA2HQ7L5A8 372 aa2.99□□□□□ -1.93
VMP1-216ENST00000592790 PDPNQ86YL7 162 aa2.99□□□□□ -1.93
VMP1-216ENST00000592790 ZIC4Q8N9L1 334 aa2.99□□□□□ -1.93
VMP1-216ENST00000592790 LRRC29Q8WV35 223 aa2.99□□□□□ -1.93
VMP1-216ENST00000592790 OR2J1Q9GZK6 312 aa2.99□□□□□ -1.93
VMP1-216ENST00000592790 FAM234AQ9H0X4 552 aa2.99□□□□□ -1.93
VMP1-216ENST00000592790 HES4Q9HCC6 221 aa2.99□□□□□ -1.93
VMP1-216ENST00000592790 OR1A1Q9P1Q5 309 aa2.99□□□□□ -1.93
VMP1-216ENST00000592790 RNF115Q9Y4L5 304 aa2.99□□□□□ -1.93
VMP1-216ENST00000592790 TBL2Q9Y4P3 447 aaKnown RBP2.99□□□□□ -1.93
VMP1-216ENST00000592790 ARHGEF17Q96PE2 2063 aaPredicted RBP2.99□□□□□ -1.93
VMP1-216ENST00000592790 TICRRQ7Z2Z1 1910 aa2.99□□□□□ -1.93
VMP1-216ENST00000592790 TMEM131Q92545 1883 aa2.99□□□□□ -1.93
VMP1-216ENST00000592790 F5P12259 2224 aa2.99□□□□□ -1.93
VMP1-216ENST00000592790 IGKV1-27A0A075B6S5 117 aa2.99□□□□□ -1.93
VMP1-216ENST00000592790 A0A1B0GW15 77 aa2.99□□□□□ -1.93
VMP1-216ENST00000592790 B9A039 149 aa2.99□□□□□ -1.93
VMP1-216ENST00000592790 CORTO00230 105 aa2.99□□□□□ -1.93
VMP1-216ENST00000592790 DLEU1O43261 78 aa2.99□□□□□ -1.93
VMP1-216ENST00000592790 C8orf88P0DMB2 117 aa2.99□□□□□ -1.93
VMP1-216ENST00000592790 PDLIM4P50479 330 aa2.99□□□□□ -1.93
VMP1-216ENST00000592790 HGFACQ04756 655 aa2.99□□□□□ -1.93
VMP1-216ENST00000592790 MDP1Q86V88 176 aa2.99□□□□□ -1.93
VMP1-216ENST00000592790 C1orf162Q8NEQ5 155 aaPredicted RBP2.99□□□□□ -1.93
VMP1-216ENST00000592790 OR1L8Q8NGR8 309 aa2.99□□□□□ -1.93
VMP1-216ENST00000592790 COL25A1Q9BXS0 654 aaPredicted RBP2.99□□□□□ -1.93
VMP1-216ENST00000592790 PRDM13Q9H4Q3 707 aa2.99□□□□□ -1.93
VMP1-216ENST00000592790 MPDZO75970 2070 aa2.99□□□□□ -1.93
VMP1-216ENST00000592790 CNOT1A5YKK6 2376 aaKnown RBP2.98□□□□□ -1.93
VMP1-216ENST00000592790 RALGAPA1Q6GYQ0 2036 aa2.98□□□□□ -1.93
VMP1-216ENST00000592790 SNRNP200O75643 2136 aaKnown RBP2.98□□□□□ -1.93
VMP1-216ENST00000592790 TRAV39A0A0B4J263 110 aa2.98□□□□□ -1.93
VMP1-216ENST00000592790 DPRXA6NFQ7 191 aa2.98□□□□□ -1.93
VMP1-216ENST00000592790 AQP7O14520 342 aa2.98□□□□□ -1.93
VMP1-216ENST00000592790 NEURL1O76050 574 aa2.98□□□□□ -1.93
VMP1-216ENST00000592790 STAG3L2P0CL84 134 aa2.98□□□□□ -1.93
VMP1-216ENST00000592790 STAG3L3P0CL85 134 aa2.98□□□□□ -1.93
VMP1-216ENST00000592790 MDKP21741 143 aaPredicted RBP2.98□□□□□ -1.93
VMP1-216ENST00000592790 CHRNB4P30926 498 aa2.98□□□□□ -1.93
VMP1-216ENST00000592790 Q0VG73 95 aa2.98□□□□□ -1.93
VMP1-216ENST00000592790 P2RY6Q15077 328 aa2.98□□□□□ -1.93
VMP1-216ENST00000592790 SPATA46Q5T0L3 261 aa2.98□□□□□ -1.93
VMP1-216ENST00000592790 C10orf113Q5VZT2 155 aa2.98□□□□□ -1.93
VMP1-216ENST00000592790 ACSM6Q6P461 480 aa2.98□□□□□ -1.93
VMP1-216ENST00000592790 COLCA1Q6ZS62 124 aa2.98□□□□□ -1.93
VMP1-216ENST00000592790 LINC01551Q86U37 167 aa2.98□□□□□ -1.93
VMP1-216ENST00000592790 TDHQ8IZJ6 230 aa2.98□□□□□ -1.93
VMP1-216ENST00000592790 OR8I2Q8N0Y5 310 aa2.98□□□□□ -1.93
VMP1-216ENST00000592790 OR10X1Q8NGY0 326 aa2.98□□□□□ -1.93
VMP1-216ENST00000592790 SLC25A40Q8TBP6 338 aa2.98□□□□□ -1.93
VMP1-216ENST00000592790 SAP25Q8TEE9 199 aa2.98□□□□□ -1.93
VMP1-216ENST00000592790 CT55Q8WUE5 264 aa2.98□□□□□ -1.93
VMP1-216ENST00000592790 CACNG8Q8WXS5 425 aa2.98□□□□□ -1.93
VMP1-216ENST00000592790 IL36RNQ9UBH0 155 aa2.98□□□□□ -1.93
VMP1-216ENST00000592790 OR51B2Q9Y5P1 312 aa2.98□□□□□ -1.93
VMP1-216ENST00000592790 CACNA1IQ9P0X4 2223 aa2.98□□□□□ -1.93
VMP1-216ENST00000592790 CEP350Q5VT06 3117 aa2.98□□□□□ -1.93
VMP1-216ENST00000592790 NCOR2Q9Y618 2525 aa2.98□□□□□ -1.93
VMP1-216ENST00000592790 MYO7AQ13402 2215 aa2.98□□□□□ -1.93
VMP1-216ENST00000592790 TRGV8A0A0C4DH27 118 aa2.98□□□□□ -1.93
VMP1-216ENST00000592790 A0A1W2PRE2 83 aa2.98□□□□□ -1.93
VMP1-216ENST00000592790 IZUMO1RA6ND01 250 aa2.98□□□□□ -1.93
VMP1-216ENST00000592790 IQCF6A8MYZ5 107 aa2.98□□□□□ -1.93
VMP1-216ENST00000592790 J3QR06 171 aa2.98□□□□□ -1.93
VMP1-216ENST00000592790 P01737 135 aa2.98□□□□□ -1.93
VMP1-216ENST00000592790 SLC25A5P05141 298 aaKnown RBP2.98□□□□□ -1.93
VMP1-216ENST00000592790 AREGP15514 252 aa2.98□□□□□ -1.93
VMP1-216ENST00000592790 TIMP3P35625 211 aa2.98□□□□□ -1.93
VMP1-216ENST00000592790 KLF3P57682 345 aaPredicted RBP2.98□□□□□ -1.93
VMP1-216ENST00000592790 YPEL3P61236 119 aaPredicted RBP2.98□□□□□ -1.93
VMP1-216ENST00000592790 RPL31P62899 125 aaKnown RBP2.98□□□□□ -1.93
VMP1-216ENST00000592790 TEX38Q6PEX7 206 aa2.98□□□□□ -1.93
VMP1-216ENST00000592790 ATP5L2Q7Z4Y8 100 aa2.98□□□□□ -1.93
VMP1-216ENST00000592790 ZNF664Q8N3J9 261 aa2.98□□□□□ -1.93
VMP1-216ENST00000592790 RPP25LQ8N5L8 163 aaKnown RBP2.98□□□□□ -1.93
VMP1-216ENST00000592790 BCL2L2Q92843 193 aaPredicted RBP2.98□□□□□ -1.93
VMP1-216ENST00000592790 GRAMD2BQ96HH9 432 aa2.98□□□□□ -1.93
VMP1-216ENST00000592790 DIRC2Q96SL1 478 aa2.98□□□□□ -1.93
VMP1-216ENST00000592790 CITED2Q99967 270 aaPredicted RBP2.98□□□□□ -1.93
VMP1-216ENST00000592790 TTTY12Q9BZ98 90 aa2.98□□□□□ -1.93
VMP1-216ENST00000592790 SEPSECSQ9HD40 501 aaKnown RBP2.98□□□□□ -1.93
VMP1-216ENST00000592790 DUSP13Q9UII6 198 aa2.98□□□□□ -1.93
VMP1-216ENST00000592790 TCF19Q9Y242 345 aa2.98□□□□□ -1.93
VMP1-216ENST00000592790 ZFP30Q9Y2G7 519 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 117.6 ms