RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 ABHD1Q96SE0 405 aa7.85□□□□□ -1.15
BRCA1-227ENST00000591849 ZNF430Q9H8G1 570 aaPredicted RBP7.85□□□□□ -1.15
BRCA1-227ENST00000591849 GNB4Q9HAV0 340 aa7.85□□□□□ -1.15
BRCA1-227ENST00000591849 MTFP1Q9UDX5 166 aa7.85□□□□□ -1.15
BRCA1-227ENST00000591849 RSL24D1Q9UHA3 163 aaKnown RBP7.85□□□□□ -1.15
BRCA1-227ENST00000591849 CEPT1Q9Y6K0 416 aa7.85□□□□□ -1.15
BRCA1-227ENST00000591849 A0A0G2JLM5 398 aa7.84□□□□□ -1.15
BRCA1-227ENST00000591849 FABP12A6NFH5 140 aa7.84□□□□□ -1.15
BRCA1-227ENST00000591849 H3BUA1 57 aa7.84□□□□□ -1.15
BRCA1-227ENST00000591849 RBFOX2O43251 390 aaKnown RBP eCLIP7.84□□□□□ -1.15
BRCA1-227ENST00000591849 SOX15O60248 233 aa7.84□□□□□ -1.15
BRCA1-227ENST00000591849 RAMP3O60896 148 aa7.84□□□□□ -1.15
BRCA1-227ENST00000591849 KBTBD11O94819 623 aa7.84□□□□□ -1.15
BRCA1-227ENST00000591849 RAB3DO95716 219 aa7.84□□□□□ -1.15
BRCA1-227ENST00000591849 CD3DP04234 171 aa7.84□□□□□ -1.15
BRCA1-227ENST00000591849 OR8U8P0C7N1 319 aa7.84□□□□□ -1.15
BRCA1-227ENST00000591849 OR9G9P0C7N8 305 aa7.84□□□□□ -1.15
BRCA1-227ENST00000591849 RPA2P15927 270 aa7.84□□□□□ -1.15
BRCA1-227ENST00000591849 NQO2P16083 231 aa7.84□□□□□ -1.15
BRCA1-227ENST00000591849 F2RP25116 425 aa7.84□□□□□ -1.15
BRCA1-227ENST00000591849 S100A5P33763 92 aa7.84□□□□□ -1.15
BRCA1-227ENST00000591849 MAS1LP35410 378 aa7.84□□□□□ -1.15
BRCA1-227ENST00000591849 LPAR6P43657 344 aa7.84□□□□□ -1.15
BRCA1-227ENST00000591849 RPL27AP46776 148 aaKnown RBP7.84□□□□□ -1.15
BRCA1-227ENST00000591849 TAS2R31P59538 309 aa7.84□□□□□ -1.15
BRCA1-227ENST00000591849 DGCR2P98153 550 aa7.84□□□□□ -1.15
BRCA1-227ENST00000591849 ZNF616Q08AN1 781 aa7.84□□□□□ -1.15
BRCA1-227ENST00000591849 SCGB2B2Q4G0G5 96 aa7.84□□□□□ -1.15
BRCA1-227ENST00000591849 VAX1Q5SQQ9 334 aa7.84□□□□□ -1.15
BRCA1-227ENST00000591849 ETV3LQ6ZN32 361 aa7.84□□□□□ -1.15
BRCA1-227ENST00000591849 SLC38A6Q8IZM9 456 aa7.84□□□□□ -1.15
BRCA1-227ENST00000591849 TMEM229BQ8NBD8 167 aa7.84□□□□□ -1.15
BRCA1-227ENST00000591849 OR4A5Q8NH83 315 aa7.84□□□□□ -1.15
BRCA1-227ENST00000591849 TMEM167AQ8TBQ9 72 aa7.84□□□□□ -1.15
BRCA1-227ENST00000591849 DGCR14Q96DF8 476 aaKnown RBP7.84□□□□□ -1.15
BRCA1-227ENST00000591849 P2RX4Q99571 388 aa7.84□□□□□ -1.15
BRCA1-227ENST00000591849 TINAGL1Q9GZM7 467 aaPredicted RBP7.84□□□□□ -1.15
BRCA1-227ENST00000591849 ZMAT5Q9UDW3 170 aaKnown RBP7.84□□□□□ -1.15
BRCA1-227ENST00000591849 NOTCH3Q9UM47 2321 aa7.84□□□□□ -1.15
BRCA1-227ENST00000591849 DISC1C4P0D8 188 aa7.83□□□□□ -1.16
BRCA1-227ENST00000591849 LINC01619G3V211 115 aa7.83□□□□□ -1.16
BRCA1-227ENST00000591849 SNAPC5O75971 98 aa7.83□□□□□ -1.16
BRCA1-227ENST00000591849 PRB2P02812 416 aaPredicted RBP7.83□□□□□ -1.16
BRCA1-227ENST00000591849 TNFSF8P32971 234 aa7.83□□□□□ -1.16
BRCA1-227ENST00000591849 UCP3P55916 312 aa7.83□□□□□ -1.16
BRCA1-227ENST00000591849 RPL8P62917 257 aaKnown RBP7.83□□□□□ -1.16
BRCA1-227ENST00000591849 RUNX1Q01196 453 aa7.83□□□□□ -1.16
BRCA1-227ENST00000591849 SSBP1Q04837 148 aaKnown RBP7.83□□□□□ -1.16
BRCA1-227ENST00000591849 MEF2DQ14814 521 aa7.83□□□□□ -1.16
BRCA1-227ENST00000591849 BEAN1Q3B7T3 259 aa7.83□□□□□ -1.16
BRCA1-227ENST00000591849 C19orf54Q5BKX5 351 aa7.83□□□□□ -1.16
BRCA1-227ENST00000591849 FOXB2Q5VYV0 432 aa7.83□□□□□ -1.16
BRCA1-227ENST00000591849 OR4A47Q6IF82 309 aa7.83□□□□□ -1.16
BRCA1-227ENST00000591849 STEAP1BQ6NZ63 245 aa7.83□□□□□ -1.16
BRCA1-227ENST00000591849 ARRDC1Q8N5I2 433 aa7.83□□□□□ -1.16
BRCA1-227ENST00000591849 COMMD5Q9GZQ3 224 aa7.83□□□□□ -1.16
BRCA1-227ENST00000591849 SLIRPQ9GZT3 109 aaKnown RBP7.83□□□□□ -1.16
BRCA1-227ENST00000591849 FXYD6Q9H0Q3 95 aa7.83□□□□□ -1.16
BRCA1-227ENST00000591849 PLEKHA2Q9HB19 425 aa7.83□□□□□ -1.16
BRCA1-227ENST00000591849 BET1LQ9NYM9 111 aa7.83□□□□□ -1.16
BRCA1-227ENST00000591849 COMMD9Q9P000 198 aa7.83□□□□□ -1.16
BRCA1-227ENST00000591849 ANKRD34BA5PLL1 514 aa7.82□□□□□ -1.16
BRCA1-227ENST00000591849 HMX3A6NHT5 357 aa7.82□□□□□ -1.16
BRCA1-227ENST00000591849 I3L521 148 aa7.82□□□□□ -1.16
BRCA1-227ENST00000591849 UPK2O00526 184 aa7.82□□□□□ -1.16
BRCA1-227ENST00000591849 S1PR2O95136 353 aa7.82□□□□□ -1.16
BRCA1-227ENST00000591849 DHFRP00374 187 aa7.82□□□□□ -1.16
BRCA1-227ENST00000591849 KRASP01116 189 aa7.82□□□□□ -1.16
BRCA1-227ENST00000591849 HSPB1P04792 205 aaKnown RBP7.82□□□□□ -1.16
BRCA1-227ENST00000591849 SERPINE2P07093 398 aa7.82□□□□□ -1.16
BRCA1-227ENST00000591849 LGALS1P09382 135 aaKnown RBP7.82□□□□□ -1.16
BRCA1-227ENST00000591849 HLA-GP17693 338 aa7.82□□□□□ -1.16
BRCA1-227ENST00000591849 PPP5CP53041 499 aa7.82□□□□□ -1.16
BRCA1-227ENST00000591849 BRWD1-AS2P59051 145 aa7.82□□□□□ -1.16
BRCA1-227ENST00000591849 ATP5G2Q06055 141 aa7.82□□□□□ -1.16
BRCA1-227ENST00000591849 KIAA0141Q14154 515 aaPredicted RBP7.82□□□□□ -1.16
BRCA1-227ENST00000591849 PYDC2Q56P42 97 aa7.82□□□□□ -1.16
BRCA1-227ENST00000591849 C10orf55Q5SWW7 151 aa7.82□□□□□ -1.16
BRCA1-227ENST00000591849 REC114Q7Z4M0 266 aa7.82□□□□□ -1.16
BRCA1-227ENST00000591849 TBC1D26Q86UD7 250 aa7.82□□□□□ -1.16
BRCA1-227ENST00000591849 PUSL1Q8N0Z8 303 aaKnown RBP7.82□□□□□ -1.16
BRCA1-227ENST00000591849 TERB2Q8NHR7 220 aa7.82□□□□□ -1.16
BRCA1-227ENST00000591849 ZFAND1Q8TCF1 268 aa7.82□□□□□ -1.16
BRCA1-227ENST00000591849 MYOZ3Q8TDC0 251 aa7.82□□□□□ -1.16
BRCA1-227ENST00000591849 SMIM4Q8WVI0 70 aa7.82□□□□□ -1.16
BRCA1-227ENST00000591849 USMG5Q96IX5 58 aa7.82□□□□□ -1.16
BRCA1-227ENST00000591849 RSRP1Q9BUV0 290 aa7.82□□□□□ -1.16
BRCA1-227ENST00000591849 ALX4Q9H161 411 aaPredicted RBP7.82□□□□□ -1.16
BRCA1-227ENST00000591849 TMEM140Q9NV12 185 aa7.82□□□□□ -1.16
BRCA1-227ENST00000591849 COPZ2Q9P299 210 aa7.82□□□□□ -1.16
BRCA1-227ENST00000591849 SEC14L6B5MCN3 397 aa7.81□□□□□ -1.16
BRCA1-227ENST00000591849 OVOL1O14753 267 aa7.81□□□□□ -1.16
BRCA1-227ENST00000591849 CTDSPLO15194 276 aa7.81□□□□□ -1.16
BRCA1-227ENST00000591849 CYB5BO43169 146 aa7.81□□□□□ -1.16
BRCA1-227ENST00000591849 RBMXL2O75526 392 aaKnown RBP7.81□□□□□ -1.16
BRCA1-227ENST00000591849 CD74P04233 296 aa7.81□□□□□ -1.16
BRCA1-227ENST00000591849 AKAIN1P0CW23 69 aa7.81□□□□□ -1.16
BRCA1-227ENST00000591849 DEFA4P12838 97 aa7.81□□□□□ -1.16
BRCA1-227ENST00000591849 HOXD3P31249 432 aaPredicted RBP7.81□□□□□ -1.16
BRCA1-227ENST00000591849 SSBP2P81877 361 aaPredicted RBP7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms