RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.18□□□□□ -0.46
RETREG3-208ENST00000589797 DBX1A6NMT0 343 aa12.18□□□□□ -0.46
RETREG3-208ENST00000589797 MPZP25189 248 aa12.18□□□□□ -0.46
RETREG3-208ENST00000589797 SPCS3P61009 180 aa12.18□□□□□ -0.46
RETREG3-208ENST00000589797 RANP62826 216 aaKnown RBP12.18□□□□□ -0.46
RETREG3-208ENST00000589797 WDR86Q86TI4 376 aa12.18□□□□□ -0.46
RETREG3-208ENST00000589797 FAM90A1Q86YD7 464 aa12.18□□□□□ -0.46
RETREG3-208ENST00000589797 GCSAMQ8N6F7 178 aa12.18□□□□□ -0.46
RETREG3-208ENST00000589797 OR4X1Q8NH49 305 aa12.18□□□□□ -0.46
RETREG3-208ENST00000589797 MYO15AQ9UKN7 3530 aa12.18□□□□□ -0.46
RETREG3-208ENST00000589797 IGHV3OR16-10A0A075B7F0 116 aa12.18□□□□□ -0.46
RETREG3-208ENST00000589797 IGHV1-69-2A0A0G2JMI3 117 aa12.18□□□□□ -0.46
RETREG3-208ENST00000589797 MYOD1P15172 320 aa12.18□□□□□ -0.46
RETREG3-208ENST00000589797 GCSAMLQ5JQS6 135 aa12.18□□□□□ -0.46
RETREG3-208ENST00000589797 OR8B3Q8NGG8 313 aa12.18□□□□□ -0.46
RETREG3-208ENST00000589797 TMEM171Q8WVE6 324 aa12.18□□□□□ -0.46
RETREG3-208ENST00000589797 OR8B2Q96RD0 313 aa12.18□□□□□ -0.46
RETREG3-208ENST00000589797 ID3Q02535 119 aa12.18□□□□□ -0.46
RETREG3-208ENST00000589797 OR1L8Q8NGR8 309 aa12.18□□□□□ -0.46
RETREG3-208ENST00000589797 USB1Q9BQ65 265 aaKnown RBP12.18□□□□□ -0.46
RETREG3-208ENST00000589797 TMUB1Q9BVT8 246 aa12.18□□□□□ -0.46
RETREG3-208ENST00000589797 CTDSP1Q9GZU7 261 aa12.18□□□□□ -0.46
RETREG3-208ENST00000589797 NPVFQ9HCQ7 196 aa12.18□□□□□ -0.46
RETREG3-208ENST00000589797 TMEM106BQ9NUM4 274 aa12.18□□□□□ -0.46
RETREG3-208ENST00000589797 RNF115Q9Y4L5 304 aa12.18□□□□□ -0.46
RETREG3-208ENST00000589797 PHOX2AO14813 284 aa12.17□□□□□ -0.46
RETREG3-208ENST00000589797 SERF2P84101 59 aa12.17□□□□□ -0.46
RETREG3-208ENST00000589797 C1orf162Q8NEQ5 155 aaPredicted RBP12.17□□□□□ -0.46
RETREG3-208ENST00000589797 RNF138Q8WVD3 245 aa12.17□□□□□ -0.46
RETREG3-208ENST00000589797 PRNDQ9UKY0 176 aa12.17□□□□□ -0.46
RETREG3-208ENST00000589797 SLC25A15Q9Y619 301 aa12.17□□□□□ -0.46
RETREG3-208ENST00000589797 MEF2BQ02080 365 aaPredicted RBP12.17□□□□□ -0.46
RETREG3-208ENST00000589797 RNF212Q495C1 297 aa12.17□□□□□ -0.46
RETREG3-208ENST00000589797 Q56UQ5 140 aa12.17□□□□□ -0.46
RETREG3-208ENST00000589797 COQ2Q96H96 371 aa12.17□□□□□ -0.46
RETREG3-208ENST00000589797 JPT1Q9UK76 154 aa12.17□□□□□ -0.46
RETREG3-208ENST00000589797 NAV2Q8IVL1 2488 aa12.17□□□□□ -0.46
RETREG3-208ENST00000589797 C17orf100A8MU93 164 aa12.17□□□□□ -0.46
RETREG3-208ENST00000589797 J3QW42 95 aa12.17□□□□□ -0.46
RETREG3-208ENST00000589797 IGHV1-46P01743 117 aa12.17□□□□□ -0.46
RETREG3-208ENST00000589797 DUX4L9Q6RFH8 374 aaPredicted RBP12.17□□□□□ -0.46
RETREG3-208ENST00000589797 LSM10Q969L4 123 aaKnown RBP12.17□□□□□ -0.46
RETREG3-208ENST00000589797 EAF1Q96JC9 268 aaPredicted RBP12.17□□□□□ -0.46
RETREG3-208ENST00000589797 TUBG2Q9NRH3 451 aa12.17□□□□□ -0.46
RETREG3-208ENST00000589797 RYDENQ9NUL5 291 aaKnown RBP12.17□□□□□ -0.46
RETREG3-208ENST00000589797 CEP192Q8TEP8 1941 aa12.16□□□□□ -0.46
RETREG3-208ENST00000589797 IGKV1-5P01602 117 aa12.16□□□□□ -0.46
RETREG3-208ENST00000589797 SLC25A5P05141 298 aaKnown RBP12.16□□□□□ -0.46
RETREG3-208ENST00000589797 CAMPP49913 170 aa12.16□□□□□ -0.46
RETREG3-208ENST00000589797 HSPE1P61604 102 aaKnown RBP12.16□□□□□ -0.46
RETREG3-208ENST00000589797 Q6P435 159 aa12.16□□□□□ -0.46
RETREG3-208ENST00000589797 FGF23Q9GZV9 251 aaPredicted RBP12.16□□□□□ -0.46
RETREG3-208ENST00000589797 IL19Q9UHD0 177 aa12.16□□□□□ -0.46
RETREG3-208ENST00000589797 IFNL4K9M1U5 179 aa12.16□□□□□ -0.46
RETREG3-208ENST00000589797 SCGB2A1O75556 95 aa12.16□□□□□ -0.46
RETREG3-208ENST00000589797 RPL8P62917 257 aaKnown RBP12.16□□□□□ -0.46
RETREG3-208ENST00000589797 HABP2Q14520 560 aaPredicted RBP12.16□□□□□ -0.46
RETREG3-208ENST00000589797 KHDC3LQ587J8 217 aa12.16□□□□□ -0.46
RETREG3-208ENST00000589797 Q6ZR03 302 aa12.16□□□□□ -0.46
RETREG3-208ENST00000589797 LURAP1Q96LR2 239 aa12.16□□□□□ -0.46
RETREG3-208ENST00000589797 WDR61Q9GZS3 305 aaKnown RBP12.16□□□□□ -0.46
RETREG3-208ENST00000589797 ZNF331Q9NQX6 463 aaPredicted RBP12.16□□□□□ -0.46
RETREG3-208ENST00000589797 TRGC2P03986 189 aa12.16□□□□□ -0.46
RETREG3-208ENST00000589797 PAX6P26367 422 aa12.16□□□□□ -0.46
RETREG3-208ENST00000589797 ZNF146Q15072 292 aa12.16□□□□□ -0.46
RETREG3-208ENST00000589797 MORN2Q502X0 79 aa12.16□□□□□ -0.46
RETREG3-208ENST00000589797 DBX2Q6ZNG2 339 aa12.16□□□□□ -0.46
RETREG3-208ENST00000589797 LHFPL4Q7Z7J7 247 aa12.16□□□□□ -0.46
RETREG3-208ENST00000589797 NHLRC2Q8NBF2 726 aa12.16□□□□□ -0.46
RETREG3-208ENST00000589797 OR4D5Q8NGN0 318 aa12.16□□□□□ -0.46
RETREG3-208ENST00000589797 WFIKKN1Q96NZ8 548 aa12.16□□□□□ -0.46
RETREG3-208ENST00000589797 FKBP11Q9NYL4 201 aa12.16□□□□□ -0.46
RETREG3-208ENST00000589797 A0A0G2JNJ9 132 aa12.15□□□□□ -0.46
RETREG3-208ENST00000589797 RRHO14718 337 aa12.15□□□□□ -0.46
RETREG3-208ENST00000589797 BPIFB3P59826 476 aa12.15□□□□□ -0.46
RETREG3-208ENST00000589797 DNM1P46Q6ZS02 220 aa12.15□□□□□ -0.46
RETREG3-208ENST00000589797 GINS3Q9BRX5 216 aa12.15□□□□□ -0.46
RETREG3-208ENST00000589797 REG4Q9BYZ8 158 aa12.15□□□□□ -0.46
RETREG3-208ENST00000589797 Q9UFV3 132 aa12.15□□□□□ -0.46
RETREG3-208ENST00000589797 TGIF2-C20orf24A0A0A6YYL0 155 aa12.15□□□□□ -0.46
RETREG3-208ENST00000589797 KBTBD11-OT1A0A1B0GTJ5 212 aa12.15□□□□□ -0.46
RETREG3-208ENST00000589797 A0A1W2PN81 502 aa12.15□□□□□ -0.46
RETREG3-208ENST00000589797 KIR2DS2P43631 304 aa12.15□□□□□ -0.46
RETREG3-208ENST00000589797 OR5B3Q8NH48 314 aa12.15□□□□□ -0.46
RETREG3-208ENST00000589797 SMIM8Q96KF7 97 aa12.15□□□□□ -0.46
RETREG3-208ENST00000589797 GAR1Q9NY12 217 aaKnown RBP12.15□□□□□ -0.46
RETREG3-208ENST00000589797 IGHV3OR16-8A0A075B7F1 116 aa12.15□□□□□ -0.46
RETREG3-208ENST00000589797 SAA2-SAA4A0A096LPE2 208 aa12.15□□□□□ -0.46
RETREG3-208ENST00000589797 TRAV3A0A0B4J244 114 aa12.15□□□□□ -0.46
RETREG3-208ENST00000589797 PPIAL4CA0A0B4J2A2 164 aa12.15□□□□□ -0.46
RETREG3-208ENST00000589797 LINC00473A8K010 186 aa12.15□□□□□ -0.46
RETREG3-208ENST00000589797 CA2P00918 260 aa12.15□□□□□ -0.46
RETREG3-208ENST00000589797 SAA2P0DJI9 122 aaPredicted RBP12.15□□□□□ -0.46
RETREG3-208ENST00000589797 PPIAL4GP0DN37 164 aa12.15□□□□□ -0.46
RETREG3-208ENST00000589797 GNG4P50150 75 aa12.15□□□□□ -0.46
RETREG3-208ENST00000589797 KHDC1LQ5JSQ8 128 aa12.15□□□□□ -0.46
RETREG3-208ENST00000589797 PNKDQ8N490 385 aa12.15□□□□□ -0.46
RETREG3-208ENST00000589797 VSTM2AQ8TAG5 236 aa12.15□□□□□ -0.46
RETREG3-208ENST00000589797 TCEAL7Q9BRU2 100 aa12.15□□□□□ -0.46
RETREG3-208ENST00000589797 MGAQ8IWI9 3026 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms