RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 PLET1Q6UQ28 207 aa4.64□□□□□ -1.67
VPS25-204ENST00000589577 IDO2Q6ZQW0 420 aa4.64□□□□□ -1.67
VPS25-204ENST00000589577 LINC00336Q6ZUF6 198 aa4.64□□□□□ -1.67
VPS25-204ENST00000589577 H1FOOQ8IZA3 346 aaPredicted RBP4.64□□□□□ -1.67
VPS25-204ENST00000589577 SLC38A6Q8IZM9 456 aa4.64□□□□□ -1.67
VPS25-204ENST00000589577 C8orf31Q8N9H6 132 aa4.64□□□□□ -1.67
VPS25-204ENST00000589577 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.64□□□□□ -1.67
VPS25-204ENST00000589577 ZBTB34Q8NCN2 500 aa4.64□□□□□ -1.67
VPS25-204ENST00000589577 OR52L2PQ8NGH6 319 aa4.64□□□□□ -1.67
VPS25-204ENST00000589577 OR51S1Q8NGJ8 323 aa4.64□□□□□ -1.67
VPS25-204ENST00000589577 OR4C16Q8NGL9 310 aa4.64□□□□□ -1.67
VPS25-204ENST00000589577 OR56B4Q8NH76 319 aa4.64□□□□□ -1.67
VPS25-204ENST00000589577 TERB2Q8NHR7 220 aa4.64□□□□□ -1.67
VPS25-204ENST00000589577 GIMAP1Q8WWP7 306 aa4.64□□□□□ -1.67
VPS25-204ENST00000589577 TRIM63Q969Q1 353 aa4.64□□□□□ -1.67
VPS25-204ENST00000589577 ZNF486Q96H40 463 aaPredicted RBP4.64□□□□□ -1.67
VPS25-204ENST00000589577 ADTRPQ96IZ2 230 aa4.64□□□□□ -1.67
VPS25-204ENST00000589577 SLC5A7Q9GZV3 580 aa4.64□□□□□ -1.67
VPS25-204ENST00000589577 OR2D2Q9H210 308 aa4.64□□□□□ -1.67
VPS25-204ENST00000589577 KLK15Q9H2R5 256 aa4.64□□□□□ -1.67
VPS25-204ENST00000589577 HRASLSQ9HDD0 168 aa4.64□□□□□ -1.67
VPS25-204ENST00000589577 TPSG1Q9NRR2 321 aa4.64□□□□□ -1.67
VPS25-204ENST00000589577 OR1A1Q9P1Q5 309 aa4.64□□□□□ -1.67
VPS25-204ENST00000589577 PSG11Q9UQ72 335 aa4.64□□□□□ -1.67
VPS25-204ENST00000589577 A0A087X0M5 115 aa4.63□□□□□ -1.67
VPS25-204ENST00000589577 TEX13DA0A0J9YY54 714 aaPredicted RBP4.63□□□□□ -1.67
VPS25-204ENST00000589577 A0A1B0GX30 115 aa4.63□□□□□ -1.67
VPS25-204ENST00000589577 A0A1W2PPI3 338 aa4.63□□□□□ -1.67
VPS25-204ENST00000589577 BUB1B-PAK6H3BSN5 160 aa4.63□□□□□ -1.67
VPS25-204ENST00000589577 J3QR06 171 aa4.63□□□□□ -1.67
VPS25-204ENST00000589577 GPR31O00270 319 aa4.63□□□□□ -1.67
VPS25-204ENST00000589577 ATG12O94817 140 aa4.63□□□□□ -1.67
VPS25-204ENST00000589577 IGHV3-7P01780 117 aa4.63□□□□□ -1.67
VPS25-204ENST00000589577 GAPDHP04406 335 aaKnown RBP4.63□□□□□ -1.67
VPS25-204ENST00000589577 FAM106CPP0CH98 169 aa4.63□□□□□ -1.67
VPS25-204ENST00000589577 CGB3P0DN86 165 aa4.63□□□□□ -1.67
VPS25-204ENST00000589577 CGB7P0DN87 165 aa4.63□□□□□ -1.67
VPS25-204ENST00000589577 AADACP22760 399 aa4.63□□□□□ -1.67
VPS25-204ENST00000589577 KIR2DS2P43631 304 aa4.63□□□□□ -1.67
VPS25-204ENST00000589577 ASAH1Q13510 395 aa4.63□□□□□ -1.67
VPS25-204ENST00000589577 KLF9Q13886 244 aaPredicted RBP4.63□□□□□ -1.67
VPS25-204ENST00000589577 MSMO1Q15800 293 aa4.63□□□□□ -1.67
VPS25-204ENST00000589577 RTL8BQ17RB0 113 aa4.63□□□□□ -1.67
VPS25-204ENST00000589577 RGS21Q2M5E4 152 aa4.63□□□□□ -1.67
VPS25-204ENST00000589577 HLA-DRB5Q30154 266 aa4.63□□□□□ -1.67
VPS25-204ENST00000589577 TRIM16LQ309B1 348 aa4.63□□□□□ -1.67
VPS25-204ENST00000589577 AADACL3Q5VUY0 350 aa4.63□□□□□ -1.67
VPS25-204ENST00000589577 FAM71F2Q6NXP2 309 aa4.63□□□□□ -1.67
VPS25-204ENST00000589577 DHRS11Q6UWP2 260 aa4.63□□□□□ -1.67
VPS25-204ENST00000589577 SLC25A48Q6ZT89 311 aaKnown RBP4.63□□□□□ -1.67
VPS25-204ENST00000589577 THNSL2Q86YJ6 484 aa4.63□□□□□ -1.67
VPS25-204ENST00000589577 TGIF2LXQ8IUE1 241 aa4.63□□□□□ -1.67
VPS25-204ENST00000589577 LYSMD2Q8IV50 215 aa4.63□□□□□ -1.67
VPS25-204ENST00000589577 OR8H3Q8N146 312 aa4.63□□□□□ -1.67
VPS25-204ENST00000589577 CENPSQ8N2Z9 138 aa4.63□□□□□ -1.67
VPS25-204ENST00000589577 LINC00311Q8N616 119 aa4.63□□□□□ -1.67
VPS25-204ENST00000589577 ZNF645Q8N7E2 425 aa4.63□□□□□ -1.67
VPS25-204ENST00000589577 MAPKAPK5-AS1Q8N8E1 139 aa4.63□□□□□ -1.67
VPS25-204ENST00000589577 ZNF491Q8N8L2 437 aa4.63□□□□□ -1.67
VPS25-204ENST00000589577 CD300LFQ8TDQ1 290 aa4.63□□□□□ -1.67
VPS25-204ENST00000589577 MOB3AQ96BX8 217 aa4.63□□□□□ -1.67
VPS25-204ENST00000589577 UBE2E2Q96LR5 201 aa4.63□□□□□ -1.67
VPS25-204ENST00000589577 HSD17B10Q99714 261 aaKnown RBP4.63□□□□□ -1.67
VPS25-204ENST00000589577 AIFM2Q9BRQ8 373 aa4.63□□□□□ -1.67
VPS25-204ENST00000589577 TINAGL1Q9GZM7 467 aaPredicted RBP4.63□□□□□ -1.67
VPS25-204ENST00000589577 LIN7CQ9NUP9 197 aaKnown RBP4.63□□□□□ -1.67
VPS25-204ENST00000589577 SLC2A8Q9NY64 477 aa4.63□□□□□ -1.67
VPS25-204ENST00000589577 KCNIP3Q9Y2W7 256 aa4.63□□□□□ -1.67
VPS25-204ENST00000589577 LRP1BQ9NZR2 4599 aa4.63□□□□□ -1.67
VPS25-204ENST00000589577 SRRM2Q9UQ35 2752 aaKnown RBP4.63□□□□□ -1.67
VPS25-204ENST00000589577 IGKV1D-8A0A087WSZ0 117 aa4.62□□□□□ -1.67
VPS25-204ENST00000589577 H7C2Y5 167 aa4.62□□□□□ -1.67
VPS25-204ENST00000589577 M0R1X1 148 aa4.62□□□□□ -1.67
VPS25-204ENST00000589577 HSD17B6O14756 317 aa4.62□□□□□ -1.67
VPS25-204ENST00000589577 LANCL1O43813 399 aa4.62□□□□□ -1.67
VPS25-204ENST00000589577 B3GALNT1O75752 331 aa4.62□□□□□ -1.67
VPS25-204ENST00000589577 TUSC2O75896 110 aa4.62□□□□□ -1.67
VPS25-204ENST00000589577 PTTG1O95997 202 aa4.62□□□□□ -1.67
VPS25-204ENST00000589577 DHFRP00374 187 aa4.62□□□□□ -1.67
VPS25-204ENST00000589577 RRASP10301 218 aa4.62□□□□□ -1.67
VPS25-204ENST00000589577 TMEM11P17152 192 aa4.62□□□□□ -1.67
VPS25-204ENST00000589577 VAMP1P23763 118 aa4.62□□□□□ -1.67
VPS25-204ENST00000589577 MC5RP33032 325 aa4.62□□□□□ -1.67
VPS25-204ENST00000589577 UCP3P55916 312 aa4.62□□□□□ -1.67
VPS25-204ENST00000589577 UBE2MP61081 183 aaKnown RBP4.62□□□□□ -1.67
VPS25-204ENST00000589577 ERVK-16P61578 105 aa4.62□□□□□ -1.67
VPS25-204ENST00000589577 SRPXP78539 464 aa4.62□□□□□ -1.67
VPS25-204ENST00000589577 DIAPH2-AS1Q14236 149 aa4.62□□□□□ -1.67
VPS25-204ENST00000589577 HNF4GQ14541 408 aa4.62□□□□□ -1.67
VPS25-204ENST00000589577 GNMTQ14749 295 aa4.62□□□□□ -1.67
VPS25-204ENST00000589577 FAAP20Q6NZ36 180 aa4.62□□□□□ -1.67
VPS25-204ENST00000589577 ZNF66Q6ZN08 573 aa4.62□□□□□ -1.67
VPS25-204ENST00000589577 KCTD9Q7L273 389 aa4.62□□□□□ -1.67
VPS25-204ENST00000589577 TMED4Q7Z7H5 227 aa4.62□□□□□ -1.67
VPS25-204ENST00000589577 MOB3BQ86TA1 216 aa4.62□□□□□ -1.67
VPS25-204ENST00000589577 TCTEX1D1Q8N7M0 179 aa4.62□□□□□ -1.67
VPS25-204ENST00000589577 Q8N9W7 124 aa4.62□□□□□ -1.67
VPS25-204ENST00000589577 MINDY2Q8NBR6 621 aa4.62□□□□□ -1.67
VPS25-204ENST00000589577 RNASE11Q8TAA1 199 aaKnown RBP4.62□□□□□ -1.67
VPS25-204ENST00000589577 TCTEX1D2Q8WW35 142 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms