RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 EGR1P18146 543 aa11.77□□□□□ -0.53
CDK5RAP3-237ENST00000585163 VDAC2P45880 294 aaPredicted RBP11.77□□□□□ -0.53
CDK5RAP3-237ENST00000585163 C9orf106Q8NAJ2 232 aa11.77□□□□□ -0.53
CDK5RAP3-237ENST00000585163 OR5T1Q8NG75 326 aa11.77□□□□□ -0.53
CDK5RAP3-237ENST00000585163 DERL1Q9BUN8 251 aa11.77□□□□□ -0.53
CDK5RAP3-237ENST00000585163 IGKV1D-17A0A075B6S4 117 aa11.76□□□□□ -0.53
CDK5RAP3-237ENST00000585163 IGHV2OR16-5A0A0B4J2B6 119 aa11.76□□□□□ -0.53
CDK5RAP3-237ENST00000585163 F6UZH7 168 aa11.76□□□□□ -0.53
CDK5RAP3-237ENST00000585163 RRHO14718 337 aa11.76□□□□□ -0.53
CDK5RAP3-237ENST00000585163 GALR2O43603 387 aaPredicted RBP11.76□□□□□ -0.53
CDK5RAP3-237ENST00000585163 YPEL1O60688 119 aa11.76□□□□□ -0.53
CDK5RAP3-237ENST00000585163 CR1LQ2VPA4 569 aa11.76□□□□□ -0.53
CDK5RAP3-237ENST00000585163 UNQ6494/PRO21346Q6UXR6 183 aa11.76□□□□□ -0.53
CDK5RAP3-237ENST00000585163 PLPPR2Q96GM1 343 aa11.76□□□□□ -0.53
CDK5RAP3-237ENST00000585163 YPEL2Q96QA6 119 aa11.76□□□□□ -0.53
CDK5RAP3-237ENST00000585163 IMMP2LQ96T52 175 aa11.76□□□□□ -0.53
CDK5RAP3-237ENST00000585163 PATZ1Q9HBE1 687 aaKnown RBP11.76□□□□□ -0.53
CDK5RAP3-237ENST00000585163 MKRN2OSH3BPM6 223 aa11.76□□□□□ -0.53
CDK5RAP3-237ENST00000585163 GFRA3O60609 400 aa11.76□□□□□ -0.53
CDK5RAP3-237ENST00000585163 BMP5P22003 454 aa11.76□□□□□ -0.53
CDK5RAP3-237ENST00000585163 IL3RAP26951 378 aa11.76□□□□□ -0.53
CDK5RAP3-237ENST00000585163 MZT1Q08AG7 82 aa11.76□□□□□ -0.53
CDK5RAP3-237ENST00000585163 FAM78BQ5VT40 261 aa11.76□□□□□ -0.53
CDK5RAP3-237ENST00000585163 TMEM144Q7Z5S9 345 aa11.76□□□□□ -0.53
CDK5RAP3-237ENST00000585163 MEGF10Q96KG7 1140 aa11.76□□□□□ -0.53
CDK5RAP3-237ENST00000585163 TXNDC17Q9BRA2 123 aa11.76□□□□□ -0.53
CDK5RAP3-237ENST00000585163 HEYLQ9NQ87 328 aaPredicted RBP11.76□□□□□ -0.53
CDK5RAP3-237ENST00000585163 IGHV1-18A0A0C4DH31 117 aa11.75□□□□□ -0.53
CDK5RAP3-237ENST00000585163 SRRM5B3KS81 715 aa11.75□□□□□ -0.53
CDK5RAP3-237ENST00000585163 M0R1X1 148 aa11.75□□□□□ -0.53
CDK5RAP3-237ENST00000585163 GCGP01275 180 aa11.75□□□□□ -0.53
CDK5RAP3-237ENST00000585163 STAG3L2P0CL84 134 aa11.75□□□□□ -0.53
CDK5RAP3-237ENST00000585163 STAG3L3P0CL85 134 aa11.75□□□□□ -0.53
CDK5RAP3-237ENST00000585163 LOXL3P58215 753 aa11.75□□□□□ -0.53
CDK5RAP3-237ENST00000585163 RELBQ01201 579 aa11.75□□□□□ -0.53
CDK5RAP3-237ENST00000585163 VKORC1L1Q8N0U8 176 aa11.75□□□□□ -0.53
CDK5RAP3-237ENST00000585163 MGST2Q99735 147 aa11.75□□□□□ -0.53
CDK5RAP3-237ENST00000585163 AURKAIP1Q9NWT8 199 aaPredicted RBP11.75□□□□□ -0.53
CDK5RAP3-237ENST00000585163 CACNA1GO43497 2377 aa11.75□□□□□ -0.53
CDK5RAP3-237ENST00000585163 AQP7O14520 342 aa11.75□□□□□ -0.53
CDK5RAP3-237ENST00000585163 MGST3O14880 152 aa11.75□□□□□ -0.53
CDK5RAP3-237ENST00000585163 ARL14EPLP0DKL9 152 aa11.75□□□□□ -0.53
CDK5RAP3-237ENST00000585163 ZNF134P52741 427 aa11.75□□□□□ -0.53
CDK5RAP3-237ENST00000585163 ERVK-16P61578 105 aa11.75□□□□□ -0.53
CDK5RAP3-237ENST00000585163 FOXL1Q12952 345 aa11.75□□□□□ -0.53
CDK5RAP3-237ENST00000585163 PRSS8Q16651 343 aa11.75□□□□□ -0.53
CDK5RAP3-237ENST00000585163 RPL39P5Q59GN2 51 aa11.75□□□□□ -0.53
CDK5RAP3-237ENST00000585163 C1orf174Q8IYL3 243 aa11.75□□□□□ -0.53
CDK5RAP3-237ENST00000585163 OR2Z1Q8NG97 314 aa11.75□□□□□ -0.53
CDK5RAP3-237ENST00000585163 BTF3L4Q96K17 158 aa11.75□□□□□ -0.53
CDK5RAP3-237ENST00000585163 GGTLC1Q9BX51 225 aa11.75□□□□□ -0.53
CDK5RAP3-237ENST00000585163 MS4A5Q9H3V2 200 aa11.75□□□□□ -0.53
CDK5RAP3-237ENST00000585163 PLSCR4Q9NRQ2 329 aa11.75□□□□□ -0.53
CDK5RAP3-237ENST00000585163 DUSP13Q9UII6 198 aa11.75□□□□□ -0.53
CDK5RAP3-237ENST00000585163 LOC400499M0QZD8 3231 aa11.74□□□□□ -0.53
CDK5RAP3-237ENST00000585163 CIDEAO60543 219 aa11.74□□□□□ -0.53
CDK5RAP3-237ENST00000585163 RPL15P61313 204 aaKnown RBP11.74□□□□□ -0.53
CDK5RAP3-237ENST00000585163 ZNF114Q8NC26 417 aa11.74□□□□□ -0.53
CDK5RAP3-237ENST00000585163 FAM234AQ9H0X4 552 aa11.74□□□□□ -0.53
CDK5RAP3-237ENST00000585163 IFI27L2Q9H2X8 130 aa11.74□□□□□ -0.53
CDK5RAP3-237ENST00000585163 PXMP4Q9Y6I8 212 aa11.74□□□□□ -0.53
CDK5RAP3-237ENST00000585163 NBEAQ8NFP9 2946 aa11.74□□□□□ -0.53
CDK5RAP3-237ENST00000585163 TRAV3A0A0B4J244 114 aa11.74□□□□□ -0.53
CDK5RAP3-237ENST00000585163 PRR33A8MZF0 331 aa11.74□□□□□ -0.53
CDK5RAP3-237ENST00000585163 F2RL2O00254 374 aa11.74□□□□□ -0.53
CDK5RAP3-237ENST00000585163 TCAPO15273 167 aa11.74□□□□□ -0.53
CDK5RAP3-237ENST00000585163 CXorf1O96002 111 aa11.74□□□□□ -0.53
CDK5RAP3-237ENST00000585163 C1QTNF9P0C862 333 aa11.74□□□□□ -0.53
CDK5RAP3-237ENST00000585163 CNN1P51911 297 aaKnown RBP11.74□□□□□ -0.53
CDK5RAP3-237ENST00000585163 TRIP6Q15654 476 aaKnown RBP11.74□□□□□ -0.53
CDK5RAP3-237ENST00000585163 MIC13Q5XKP0 118 aa11.74□□□□□ -0.53
CDK5RAP3-237ENST00000585163 ABHD12Q8N2K0 398 aa11.74□□□□□ -0.53
CDK5RAP3-237ENST00000585163 TMEM18Q96B42 140 aa11.74□□□□□ -0.53
CDK5RAP3-237ENST00000585163 OPN3Q9H1Y3 402 aaPredicted RBP11.74□□□□□ -0.53
CDK5RAP3-237ENST00000585163 TRBV20OR9-2A0A075B6H5 130 aa11.73□□□□□ -0.53
CDK5RAP3-237ENST00000585163 CFHR2P36980 270 aa11.73□□□□□ -0.53
CDK5RAP3-237ENST00000585163 ZNF664Q8N3J9 261 aa11.73□□□□□ -0.53
CDK5RAP3-237ENST00000585163 FDCSPQ8NFU4 85 aa11.73□□□□□ -0.53
CDK5RAP3-237ENST00000585163 PPP1R35Q8TAP8 253 aa11.73□□□□□ -0.53
CDK5RAP3-237ENST00000585163 SFRP2Q96HF1 295 aa11.73□□□□□ -0.53
CDK5RAP3-237ENST00000585163 S1PR3Q99500 378 aa11.73□□□□□ -0.53
CDK5RAP3-237ENST00000585163 TMEM140Q9NV12 185 aa11.73□□□□□ -0.53
CDK5RAP3-237ENST00000585163 LSM4Q9Y4Z0 139 aaKnown RBP11.73□□□□□ -0.53
CDK5RAP3-237ENST00000585163 TET2Q6N021 2002 aaPredicted RBP11.73□□□□□ -0.53
CDK5RAP3-237ENST00000585163 TRGV8A0A0C4DH27 118 aa11.73□□□□□ -0.53
CDK5RAP3-237ENST00000585163 A0A0U1RQK1 487 aa11.73□□□□□ -0.53
CDK5RAP3-237ENST00000585163 ZNF320A2RRD8 509 aa11.73□□□□□ -0.53
CDK5RAP3-237ENST00000585163 PGPEP1LA6NFU8 196 aa11.73□□□□□ -0.53
CDK5RAP3-237ENST00000585163 A8MWP6 167 aa11.73□□□□□ -0.53
CDK5RAP3-237ENST00000585163 CCL11P51671 97 aa11.73□□□□□ -0.53
CDK5RAP3-237ENST00000585163 DEFB123Q8N688 67 aa11.73□□□□□ -0.53
CDK5RAP3-237ENST00000585163 GCSAMQ8N6F7 178 aa11.73□□□□□ -0.53
CDK5RAP3-237ENST00000585163 DDB2Q92466 427 aa11.73□□□□□ -0.53
CDK5RAP3-237ENST00000585163 SARAFQ96BY9 339 aa11.73□□□□□ -0.53
CDK5RAP3-237ENST00000585163 C1orf159Q96HA4 380 aa11.73□□□□□ -0.53
CDK5RAP3-237ENST00000585163 ZNF71Q9NQZ8 489 aaPredicted RBP11.73□□□□□ -0.53
CDK5RAP3-237ENST00000585163 DSPP15924 2871 aaKnown RBP11.72□□□□□ -0.53
CDK5RAP3-237ENST00000585163 NKX2-8O15522 239 aa11.72□□□□□ -0.53
CDK5RAP3-237ENST00000585163 IGHV3-13P01766 116 aa11.72□□□□□ -0.53
CDK5RAP3-237ENST00000585163 IGHV3-7P01780 117 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms