RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 DEFB114Q30KQ6 69 aa11.35□□□□□ -0.59
VAPA-209ENST00000585042 CD300EQ496F6 205 aaPredicted RBP11.35□□□□□ -0.59
VAPA-209ENST00000585042 HACD4Q5VWC8 232 aa11.35□□□□□ -0.59
VAPA-209ENST00000585042 IDO2Q6ZQW0 420 aa11.35□□□□□ -0.59
VAPA-209ENST00000585042 GPR141Q7Z602 305 aa11.35□□□□□ -0.59
VAPA-209ENST00000585042 VSTM2AQ8TAG5 236 aa11.35□□□□□ -0.59
VAPA-209ENST00000585042 S100A16Q96FQ6 103 aaKnown RBP11.35□□□□□ -0.59
VAPA-209ENST00000585042 NEURL2Q9BR09 285 aa11.35□□□□□ -0.59
VAPA-209ENST00000585042 GAR1Q9NY12 217 aaKnown RBP11.35□□□□□ -0.59
VAPA-209ENST00000585042 ZNF257Q9Y2Q1 563 aa11.35□□□□□ -0.59
VAPA-209ENST00000585042 MRPS7Q9Y2R9 242 aaKnown RBP11.35□□□□□ -0.59
VAPA-209ENST00000585042 OR2W1Q9Y3N9 320 aa11.35□□□□□ -0.59
VAPA-209ENST00000585042 RYR2Q92736 4967 aa11.34□□□□□ -0.59
VAPA-209ENST00000585042 GGCTO75223 188 aaKnown RBP11.34□□□□□ -0.59
VAPA-209ENST00000585042 JTBO76095 146 aa11.34□□□□□ -0.59
VAPA-209ENST00000585042 SAA1P0DJI8 122 aaPredicted RBP11.34□□□□□ -0.59
VAPA-209ENST00000585042 MAS1LP35410 378 aa11.34□□□□□ -0.59
VAPA-209ENST00000585042 CD81P60033 236 aa11.34□□□□□ -0.59
VAPA-209ENST00000585042 DEFA5Q01523 94 aa11.34□□□□□ -0.59
VAPA-209ENST00000585042 KLK9Q2XQG4 91 aa11.34□□□□□ -0.59
VAPA-209ENST00000585042 ADAMTSL5Q6ZMM2 481 aa11.34□□□□□ -0.59
VAPA-209ENST00000585042 GPHB5Q86YW7 130 aa11.34□□□□□ -0.59
VAPA-209ENST00000585042 MAFIPQ8WZ33 124 aa11.34□□□□□ -0.59
VAPA-209ENST00000585042 SLC25A46Q96AG3 418 aa11.34□□□□□ -0.59
VAPA-209ENST00000585042 DCUN1D5Q9BTE7 237 aa11.34□□□□□ -0.59
VAPA-209ENST00000585042 ZC4H2Q9NQZ6 224 aa11.34□□□□□ -0.59
VAPA-209ENST00000585042 KLK9Q9UKQ9 250 aa11.34□□□□□ -0.59
VAPA-209ENST00000585042 DMRT1Q9Y5R6 373 aa11.34□□□□□ -0.59
VAPA-209ENST00000585042 NPIPB5A8MRT5 1133 aa11.33□□□□□ -0.6
VAPA-209ENST00000585042 FCGR3BO75015 233 aa11.33□□□□□ -0.6
VAPA-209ENST00000585042 VBP1P61758 197 aa11.33□□□□□ -0.6
VAPA-209ENST00000585042 C15orf32Q32M92 178 aa11.33□□□□□ -0.6
VAPA-209ENST00000585042 CNIH2Q6PI25 160 aa11.33□□□□□ -0.6
VAPA-209ENST00000585042 KCTD9Q7L273 389 aa11.33□□□□□ -0.6
VAPA-209ENST00000585042 OR5H6Q8NGV6 325 aa11.33□□□□□ -0.6
VAPA-209ENST00000585042 DYNLRB2Q8TF09 96 aa11.33□□□□□ -0.6
VAPA-209ENST00000585042 HSD17B10Q99714 261 aaKnown RBP11.33□□□□□ -0.6
VAPA-209ENST00000585042 SLC2A9Q9NRM0 540 aa11.33□□□□□ -0.6
VAPA-209ENST00000585042 RBMX2Q9Y388 322 aaKnown RBP11.33□□□□□ -0.6
VAPA-209ENST00000585042 TRAV18A0A075B6X5 111 aa11.32□□□□□ -0.6
VAPA-209ENST00000585042 IGKV1D-8A0A087WSZ0 117 aa11.32□□□□□ -0.6
VAPA-209ENST00000585042 TMEM235A6NFC5 223 aa11.32□□□□□ -0.6
VAPA-209ENST00000585042 C2orf70A6NJV1 201 aa11.32□□□□□ -0.6
VAPA-209ENST00000585042 OR11H12B2RN74 326 aa11.32□□□□□ -0.6
VAPA-209ENST00000585042 DHFRP00374 187 aa11.32□□□□□ -0.6
VAPA-209ENST00000585042 PRH1P02810 166 aa11.32□□□□□ -0.6
VAPA-209ENST00000585042 FOLR2P14207 255 aa11.32□□□□□ -0.6
VAPA-209ENST00000585042 TGFBR1P36897 503 aa11.32□□□□□ -0.6
VAPA-209ENST00000585042 RORCP51449 518 aa11.32□□□□□ -0.6
VAPA-209ENST00000585042 NCS1P62166 190 aa11.32□□□□□ -0.6
VAPA-209ENST00000585042 UBE2NLQ5JXB2 153 aa11.32□□□□□ -0.6
VAPA-209ENST00000585042 GPR107Q5VW38 600 aa11.32□□□□□ -0.6
VAPA-209ENST00000585042 TMEM167AQ8TBQ9 72 aa11.32□□□□□ -0.6
VAPA-209ENST00000585042 OR2A7Q96R45 310 aa11.32□□□□□ -0.6
VAPA-209ENST00000585042 AIFM2Q9BRQ8 373 aa11.32□□□□□ -0.6
VAPA-209ENST00000585042 ST6GALNAC5Q9BVH7 336 aa11.32□□□□□ -0.6
VAPA-209ENST00000585042 PLEKHA3Q9HB20 300 aa11.32□□□□□ -0.6
VAPA-209ENST00000585042 SMIM31A0A1B0GVY4 71 aa11.31□□□□□ -0.6
VAPA-209ENST00000585042 RBMY1BA6NDE4 496 aaKnown RBP11.31□□□□□ -0.6
VAPA-209ENST00000585042 RBMY1EA6NEQ0 496 aaKnown RBP11.31□□□□□ -0.6
VAPA-209ENST00000585042 TEX22C9J3V5 150 aa11.31□□□□□ -0.6
VAPA-209ENST00000585042 OR2J3O76001 311 aa11.31□□□□□ -0.6
VAPA-209ENST00000585042 GABARAPO95166 117 aa11.31□□□□□ -0.6
VAPA-209ENST00000585042 IGLV2-14P01704 120 aa11.31□□□□□ -0.6
VAPA-209ENST00000585042 CRYGCP07315 174 aa11.31□□□□□ -0.6
VAPA-209ENST00000585042 CD7P09564 240 aa11.31□□□□□ -0.6
VAPA-209ENST00000585042 RBMY1DP0C7P1 496 aaKnown RBP11.31□□□□□ -0.6
VAPA-209ENST00000585042 HIST1H1BP16401 226 aaKnown RBP11.31□□□□□ -0.6
VAPA-209ENST00000585042 ALDH3B2P48448 385 aa11.31□□□□□ -0.6
VAPA-209ENST00000585042 FAM106AQ4KMX7 169 aa11.31□□□□□ -0.6
VAPA-209ENST00000585042 MZT2AQ6P582 158 aa11.31□□□□□ -0.6
VAPA-209ENST00000585042 PUSL1Q8N0Z8 303 aaKnown RBP11.31□□□□□ -0.6
VAPA-209ENST00000585042 SAMD12Q8N8I0 201 aa11.31□□□□□ -0.6
VAPA-209ENST00000585042 OR4S2Q8NH73 311 aa11.31□□□□□ -0.6
VAPA-209ENST00000585042 AP3S1Q92572 193 aa11.31□□□□□ -0.6
VAPA-209ENST00000585042 SLC25A38Q96DW6 304 aa11.31□□□□□ -0.6
VAPA-209ENST00000585042 FBXL7Q9UJT9 491 aa11.31□□□□□ -0.6
VAPA-209ENST00000585042 DPPA5A6NC42 116 aa11.3□□□□□ -0.6
VAPA-209ENST00000585042 XRCC3O43542 346 aa11.3□□□□□ -0.6
VAPA-209ENST00000585042 NOL3O60936 208 aaKnown RBP11.3□□□□□ -0.6
VAPA-209ENST00000585042 KBTBD11O94819 623 aa11.3□□□□□ -0.6
VAPA-209ENST00000585042 OR2C1O95371 312 aa11.3□□□□□ -0.6
VAPA-209ENST00000585042 HRASP01112 189 aa11.3□□□□□ -0.6
VAPA-209ENST00000585042 IL6RP08887 468 aaPredicted RBP11.3□□□□□ -0.6
VAPA-209ENST00000585042 ZNF735P0CB33 412 aa11.3□□□□□ -0.6
VAPA-209ENST00000585042 CBLN1P23435 193 aa11.3□□□□□ -0.6
VAPA-209ENST00000585042 CBX5P45973 191 aa11.3□□□□□ -0.6
VAPA-209ENST00000585042 RPL27AP46776 148 aaKnown RBP11.3□□□□□ -0.6
VAPA-209ENST00000585042 RPL30P62888 115 aaKnown RBP11.3□□□□□ -0.6
VAPA-209ENST00000585042 EIF4EBP1Q13541 118 aaPredicted RBP11.3□□□□□ -0.6
VAPA-209ENST00000585042 MSMO1Q15800 293 aa11.3□□□□□ -0.6
VAPA-209ENST00000585042 ANKRD55Q3KP44 614 aa11.3□□□□□ -0.6
VAPA-209ENST00000585042 ZNF66Q6ZN08 573 aa11.3□□□□□ -0.6
VAPA-209ENST00000585042 SLC16A13Q7RTY0 426 aa11.3□□□□□ -0.6
VAPA-209ENST00000585042 DEFB125Q8N687 156 aa11.3□□□□□ -0.6
VAPA-209ENST00000585042 NUDCD2Q8WVJ2 157 aa11.3□□□□□ -0.6
VAPA-209ENST00000585042 CMTM3Q96MX0 182 aa11.3□□□□□ -0.6
VAPA-209ENST00000585042 SACSQ9NZJ4 4579 aa11.3□□□□□ -0.6
VAPA-209ENST00000585042 PPP5D1E7EU14 171 aa11.29□□□□□ -0.6
VAPA-209ENST00000585042 NFYAP23511 347 aaPredicted RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms