RNA–Protein interactions for RNA: ENST00000583800.1

SMCHD1-210, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-210ENST00000583800 KCNG3Q8TAE7 436 aa5.88□□□□□ -1.47
SMCHD1-210ENST00000583800 THRSPQ92748 146 aa5.88□□□□□ -1.47
SMCHD1-210ENST00000583800 PTX4Q96A99 478 aa5.88□□□□□ -1.47
SMCHD1-210ENST00000583800 HARBI1Q96MB7 349 aa5.88□□□□□ -1.47
SMCHD1-210ENST00000583800 FYTTD1Q96QD9 318 aaKnown RBP5.88□□□□□ -1.47
SMCHD1-210ENST00000583800 PHB2Q99623 299 aa5.88□□□□□ -1.47
SMCHD1-210ENST00000583800 NEURL2Q9BR09 285 aa5.88□□□□□ -1.47
SMCHD1-210ENST00000583800 LPAR5Q9H1C0 372 aa5.88□□□□□ -1.47
SMCHD1-210ENST00000583800 SRD5A3Q9H8P0 318 aa5.88□□□□□ -1.47
SMCHD1-210ENST00000583800 Q9N2K0 584 aa5.88□□□□□ -1.47
SMCHD1-210ENST00000583800 RDH8Q9NYR8 311 aa5.88□□□□□ -1.47
SMCHD1-210ENST00000583800 SIGLEC8Q9NYZ4 499 aa5.88□□□□□ -1.47
SMCHD1-210ENST00000583800 SRRM4A7MD48 611 aaKnown RBP5.87□□□□□ -1.47
SMCHD1-210ENST00000583800 BMPR1BO00238 502 aa5.87□□□□□ -1.47
SMCHD1-210ENST00000583800 PRH1P02810 166 aa5.87□□□□□ -1.47
SMCHD1-210ENST00000583800 CD3GP09693 182 aa5.87□□□□□ -1.47
SMCHD1-210ENST00000583800 RPS19P39019 145 aaKnown RBP5.87□□□□□ -1.47
SMCHD1-210ENST00000583800 P2RY14Q15391 338 aa5.87□□□□□ -1.47
SMCHD1-210ENST00000583800 TATDN3Q17R31 274 aa5.87□□□□□ -1.47
SMCHD1-210ENST00000583800 MRGPRG-AS1Q2M3A8 158 aa5.87□□□□□ -1.47
SMCHD1-210ENST00000583800 ACSM3Q53FZ2 586 aa5.87□□□□□ -1.47
SMCHD1-210ENST00000583800 RNLSQ5VYX0 342 aa5.87□□□□□ -1.47
SMCHD1-210ENST00000583800 LAIR2Q6ISS4 152 aa5.87□□□□□ -1.47
SMCHD1-210ENST00000583800 ADAD2Q8NCV1 583 aaKnown RBP5.87□□□□□ -1.47
SMCHD1-210ENST00000583800 OR2K2Q8NGT1 345 aa5.87□□□□□ -1.47
SMCHD1-210ENST00000583800 LINC00476Q8WZB0 136 aa5.87□□□□□ -1.47
SMCHD1-210ENST00000583800 C5orf30Q96GV9 206 aa5.87□□□□□ -1.47
SMCHD1-210ENST00000583800 USMG5Q96IX5 58 aa5.87□□□□□ -1.47
SMCHD1-210ENST00000583800 TMEM68Q96MH6 324 aa5.87□□□□□ -1.47
SMCHD1-210ENST00000583800 OR2D2Q9H210 308 aa5.87□□□□□ -1.47
SMCHD1-210ENST00000583800 RIMS4Q9H426 269 aaPredicted RBP5.87□□□□□ -1.47
SMCHD1-210ENST00000583800 C12orf4Q9NQ89 552 aa5.87□□□□□ -1.47
SMCHD1-210ENST00000583800 RABL2BQ9UNT1 228 aa5.87□□□□□ -1.47
SMCHD1-210ENST00000583800 KCNK7Q9Y2U2 307 aa5.87□□□□□ -1.47
SMCHD1-210ENST00000583800 SELENOKQ9Y6D0 94 aa5.87□□□□□ -1.47
SMCHD1-210ENST00000583800 A0A0B4J203 849 aa5.86□□□□□ -1.47
SMCHD1-210ENST00000583800 MSGN1A6NI15 193 aa5.86□□□□□ -1.47
SMCHD1-210ENST00000583800 FOXI3A8MTJ6 420 aaPredicted RBP5.86□□□□□ -1.47
SMCHD1-210ENST00000583800 OR9G9P0C7N8 305 aa5.86□□□□□ -1.47
SMCHD1-210ENST00000583800 SRMP19623 302 aa5.86□□□□□ -1.47
SMCHD1-210ENST00000583800 PI3P19957 117 aa5.86□□□□□ -1.47
SMCHD1-210ENST00000583800 TMEM50BP56557 158 aa5.86□□□□□ -1.47
SMCHD1-210ENST00000583800 SUMO2P61956 95 aaKnown RBP5.86□□□□□ -1.47
SMCHD1-210ENST00000583800 RHOGP84095 191 aa5.86□□□□□ -1.47
SMCHD1-210ENST00000583800 ZNF45Q02386 682 aa5.86□□□□□ -1.47
SMCHD1-210ENST00000583800 EXOSC2Q13868 293 aaKnown RBP5.86□□□□□ -1.47
SMCHD1-210ENST00000583800 TNXAQ16473 311 aa5.86□□□□□ -1.47
SMCHD1-210ENST00000583800 GUCA2BQ16661 112 aa5.86□□□□□ -1.47
SMCHD1-210ENST00000583800 HSD17B12Q53GQ0 312 aa5.86□□□□□ -1.47
SMCHD1-210ENST00000583800 TTC23Q5W5X9 447 aa5.86□□□□□ -1.47
SMCHD1-210ENST00000583800 IDO2Q6ZQW0 420 aa5.86□□□□□ -1.47
SMCHD1-210ENST00000583800 LAX1Q8IWV1 398 aa5.86□□□□□ -1.47
SMCHD1-210ENST00000583800 NANOGP1Q8N7R0 232 aa5.86□□□□□ -1.47
SMCHD1-210ENST00000583800 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.86□□□□□ -1.47
SMCHD1-210ENST00000583800 OR6M1Q8NGM8 313 aa5.86□□□□□ -1.47
SMCHD1-210ENST00000583800 DYNLRB2Q8TF09 96 aa5.86□□□□□ -1.47
SMCHD1-210ENST00000583800 SRSF12Q8WXF0 261 aaKnown RBP5.86□□□□□ -1.47
SMCHD1-210ENST00000583800 PHYHIPQ92561 330 aa5.86□□□□□ -1.47
SMCHD1-210ENST00000583800 SNAPC3Q92966 411 aa5.86□□□□□ -1.47
SMCHD1-210ENST00000583800 ARHGAP5-AS1Q96IT6 56 aa5.86□□□□□ -1.47
SMCHD1-210ENST00000583800 GFI1Q99684 422 aa5.86□□□□□ -1.47
SMCHD1-210ENST00000583800 CMSS1Q9BQ75 279 aaKnown RBP5.86□□□□□ -1.47
SMCHD1-210ENST00000583800 URM1Q9BTM9 101 aaKnown RBP5.86□□□□□ -1.47
SMCHD1-210ENST00000583800 PECRQ9BY49 303 aa5.86□□□□□ -1.47
SMCHD1-210ENST00000583800 AKIP1Q9NQ31 210 aa5.86□□□□□ -1.47
SMCHD1-210ENST00000583800 SDHAF2Q9NX18 166 aa5.86□□□□□ -1.47
SMCHD1-210ENST00000583800 SLC2A8Q9NY64 477 aa5.86□□□□□ -1.47
SMCHD1-210ENST00000583800 ZNF230Q9UIE0 474 aaPredicted RBP5.86□□□□□ -1.47
SMCHD1-210ENST00000583800 PSORS1C1Q9UIG5 152 aa5.86□□□□□ -1.47
SMCHD1-210ENST00000583800 MGAT4AQ9UM21 535 aa5.86□□□□□ -1.47
SMCHD1-210ENST00000583800 KMT2AQ03164 3969 aa5.85□□□□□ -1.47
SMCHD1-210ENST00000583800 OR11H12B2RN74 326 aa5.85□□□□□ -1.47
SMCHD1-210ENST00000583800 TRDCB7Z8K6 153 aa5.85□□□□□ -1.47
SMCHD1-210ENST00000583800 PPP5D1E7EU14 171 aa5.85□□□□□ -1.47
SMCHD1-210ENST00000583800 BET1O15155 118 aa5.85□□□□□ -1.47
SMCHD1-210ENST00000583800 MPPED1O15442 326 aa5.85□□□□□ -1.47
SMCHD1-210ENST00000583800 AIREO43918 545 aa5.85□□□□□ -1.47
SMCHD1-210ENST00000583800 LY6G6CO95867 125 aa5.85□□□□□ -1.47
SMCHD1-210ENST00000583800 HLA-AP01891 365 aaKnown RBP5.85□□□□□ -1.47
SMCHD1-210ENST00000583800 IL6RP08887 468 aaPredicted RBP5.85□□□□□ -1.47
SMCHD1-210ENST00000583800 GNAO1P09471 354 aa5.85□□□□□ -1.47
SMCHD1-210ENST00000583800 CLDN12P56749 244 aa5.85□□□□□ -1.47
SMCHD1-210ENST00000583800 DEFB114Q30KQ6 69 aa5.85□□□□□ -1.47
SMCHD1-210ENST00000583800 VMA21Q3ZAQ7 101 aa5.85□□□□□ -1.47
SMCHD1-210ENST00000583800 PLAC9Q5JTB6 97 aa5.85□□□□□ -1.47
SMCHD1-210ENST00000583800 CEACAM19Q7Z692 300 aa5.85□□□□□ -1.47
SMCHD1-210ENST00000583800 C10orf67Q8IYJ2 551 aa5.85□□□□□ -1.47
SMCHD1-210ENST00000583800 FAM89BQ8N5H3 189 aa5.85□□□□□ -1.47
SMCHD1-210ENST00000583800 DHRSXQ8N5I4 330 aa5.85□□□□□ -1.47
SMCHD1-210ENST00000583800 MS4A15Q8N5U1 240 aa5.85□□□□□ -1.47
SMCHD1-210ENST00000583800 BPIFB6Q8NFQ5 453 aa5.85□□□□□ -1.47
SMCHD1-210ENST00000583800 TSPAN14Q8NG11 270 aa5.85□□□□□ -1.47
SMCHD1-210ENST00000583800 CACNG8Q8WXS5 425 aa5.85□□□□□ -1.47
SMCHD1-210ENST00000583800 ACOT12Q8WYK0 555 aa5.85□□□□□ -1.47
SMCHD1-210ENST00000583800 PLGRKTQ9HBL7 147 aa5.85□□□□□ -1.47
SMCHD1-210ENST00000583800 DNAH10Q8IVF4 4471 aa5.85□□□□□ -1.47
SMCHD1-210ENST00000583800 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.84□□□□□ -1.47
SMCHD1-210ENST00000583800 TRBV9A0A0B4J1U6 114 aa5.84□□□□□ -1.47
SMCHD1-210ENST00000583800 CBY3A6NI87 242 aa5.84□□□□□ -1.47
SMCHD1-210ENST00000583800 C2orf70A6NJV1 201 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms