RNA–Protein interactions for RNA: ENST00000583327.2

ITGB4-209, Transcript of integrin subunit beta 4, humanhuman

TSL 3

Gene ITGB4, Length 699 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-209ENST00000583327 A0A1B0GU03 582 aa10.85□□□□□ -0.67
ITGB4-209ENST00000583327 MPTX1A8MV57 137 aa10.85□□□□□ -0.67
ITGB4-209ENST00000583327 FCN1O00602 326 aa10.85□□□□□ -0.67
ITGB4-209ENST00000583327 SLC25A17O43808 307 aa10.85□□□□□ -0.67
ITGB4-209ENST00000583327 CHST1O43916 411 aa10.85□□□□□ -0.67
ITGB4-209ENST00000583327 KBTBD11O94819 623 aa10.85□□□□□ -0.67
ITGB4-209ENST00000583327 HOXB5P09067 269 aa10.85□□□□□ -0.67
ITGB4-209ENST00000583327 OR9G9P0C7N8 305 aa10.85□□□□□ -0.67
ITGB4-209ENST00000583327 SRSF4Q08170 494 aaKnown RBP10.85□□□□□ -0.67
ITGB4-209ENST00000583327 MMDQ15546 238 aa10.85□□□□□ -0.67
ITGB4-209ENST00000583327 LY6EQ16553 131 aa10.85□□□□□ -0.67
ITGB4-209ENST00000583327 H2BFWTQ7Z2G1 175 aa10.85□□□□□ -0.67
ITGB4-209ENST00000583327 PPP1R27Q86WC6 154 aa10.85□□□□□ -0.67
ITGB4-209ENST00000583327 TMEM219Q86XT9 240 aa10.85□□□□□ -0.67
ITGB4-209ENST00000583327 DMBX1Q8NFW5 382 aa10.85□□□□□ -0.67
ITGB4-209ENST00000583327 ZNF418Q8TF45 676 aaPredicted RBP10.85□□□□□ -0.67
ITGB4-209ENST00000583327 RRNAD1Q96FB5 475 aaKnown RBP10.85□□□□□ -0.67
ITGB4-209ENST00000583327 OR10C1Q96KK4 312 aa10.85□□□□□ -0.67
ITGB4-209ENST00000583327 TPSG1Q9NRR2 321 aa10.85□□□□□ -0.67
ITGB4-209ENST00000583327 METTL1Q9UBP6 276 aaKnown RBP10.85□□□□□ -0.67
ITGB4-209ENST00000583327 MOB4Q9Y3A3 225 aa10.85□□□□□ -0.67
ITGB4-209ENST00000583327 A0A1B0GVG6 124 aa10.84□□□□□ -0.67
ITGB4-209ENST00000583327 DNAJC9-AS1A6NH13 148 aa10.84□□□□□ -0.67
ITGB4-209ENST00000583327 ERVK-16P61578 105 aa10.84□□□□□ -0.67
ITGB4-209ENST00000583327 RRAS2P62070 204 aaPredicted RBP10.84□□□□□ -0.67
ITGB4-209ENST00000583327 PJVKQ0ZLH3 352 aa10.84□□□□□ -0.67
ITGB4-209ENST00000583327 PRSS8Q16651 343 aa10.84□□□□□ -0.67
ITGB4-209ENST00000583327 IZUMO4Q1ZYL8 232 aa10.84□□□□□ -0.67
ITGB4-209ENST00000583327 PDLIM3Q53GG5 364 aaPredicted RBP10.84□□□□□ -0.67
ITGB4-209ENST00000583327 RBMS3Q6XE24 437 aaKnown RBP10.84□□□□□ -0.67
ITGB4-209ENST00000583327 SSX9Q7RTT3 188 aa10.84□□□□□ -0.67
ITGB4-209ENST00000583327 ZNF429Q86V71 674 aa10.84□□□□□ -0.67
ITGB4-209ENST00000583327 FOXRED2Q8IWF2 684 aa10.84□□□□□ -0.67
ITGB4-209ENST00000583327 OR11H7Q8NGC8 314 aa10.84□□□□□ -0.67
ITGB4-209ENST00000583327 OR5M8Q8NGP6 311 aa10.84□□□□□ -0.67
ITGB4-209ENST00000583327 CHIAQ9BZP6 476 aa10.84□□□□□ -0.67
ITGB4-209ENST00000583327 FBXL15Q9H469 300 aa10.84□□□□□ -0.67
ITGB4-209ENST00000583327 ZNF430Q9H8G1 570 aaPredicted RBP10.84□□□□□ -0.67
ITGB4-209ENST00000583327 TMEM14BQ9NUH8 114 aa10.84□□□□□ -0.67
ITGB4-209ENST00000583327 HIVEP2P31629 2446 aa10.84□□□□□ -0.67
ITGB4-209ENST00000583327 BTBD17A6NE02 478 aa10.83□□□□□ -0.68
ITGB4-209ENST00000583327 NCBP2LA6PVI3 153 aaKnown RBP10.83□□□□□ -0.68
ITGB4-209ENST00000583327 M0QZK8 103 aa10.83□□□□□ -0.68
ITGB4-209ENST00000583327 IFNA21P01568 189 aa10.83□□□□□ -0.68
ITGB4-209ENST00000583327 HLA-DRB1P01911 266 aa10.83□□□□□ -0.68
ITGB4-209ENST00000583327 RNASE1P07998 156 aaKnown RBP10.83□□□□□ -0.68
ITGB4-209ENST00000583327 CXCL3P19876 107 aa10.83□□□□□ -0.68
ITGB4-209ENST00000583327 MAS1LP35410 378 aa10.83□□□□□ -0.68
ITGB4-209ENST00000583327 AKR1C2P52895 323 aa10.83□□□□□ -0.68
ITGB4-209ENST00000583327 H2BFSP57053 126 aa10.83□□□□□ -0.68
ITGB4-209ENST00000583327 FCN2Q15485 313 aa10.83□□□□□ -0.68
ITGB4-209ENST00000583327 ZNF562Q6V9R5 426 aa10.83□□□□□ -0.68
ITGB4-209ENST00000583327 MMD2Q8IY49 270 aa10.83□□□□□ -0.68
ITGB4-209ENST00000583327 UXS1Q8NBZ7 420 aa10.83□□□□□ -0.68
ITGB4-209ENST00000583327 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.83□□□□□ -0.68
ITGB4-209ENST00000583327 KIAA1456Q9P272 454 aa10.83□□□□□ -0.68
ITGB4-209ENST00000583327 FOXA2Q9Y261 457 aaPredicted RBP10.83□□□□□ -0.68
ITGB4-209ENST00000583327 NAV3Q8IVL0 2385 aa10.83□□□□□ -0.68
ITGB4-209ENST00000583327 TLN2Q9Y4G6 2542 aa10.83□□□□□ -0.68
ITGB4-209ENST00000583327 CUBNO60494 3623 aa10.83□□□□□ -0.68
ITGB4-209ENST00000583327 F8P00451 2351 aa10.82□□□□□ -0.68
ITGB4-209ENST00000583327 HMX3A6NHT5 357 aa10.82□□□□□ -0.68
ITGB4-209ENST00000583327 SSNA1O43805 119 aa10.82□□□□□ -0.68
ITGB4-209ENST00000583327 GPR137BO60478 399 aa10.82□□□□□ -0.68
ITGB4-209ENST00000583327 RPL15P61313 204 aaKnown RBP10.82□□□□□ -0.68
ITGB4-209ENST00000583327 BLCAPP62952 87 aa10.82□□□□□ -0.68
ITGB4-209ENST00000583327 ID3Q02535 119 aa10.82□□□□□ -0.68
ITGB4-209ENST00000583327 SMCO1Q147U7 214 aa10.82□□□□□ -0.68
ITGB4-209ENST00000583327 OR4D5Q8NGN0 318 aa10.82□□□□□ -0.68
ITGB4-209ENST00000583327 OR52E5Q8NH55 327 aa10.82□□□□□ -0.68
ITGB4-209ENST00000583327 C2orf50Q96LR7 162 aa10.82□□□□□ -0.68
ITGB4-209ENST00000583327 MED28Q9H204 178 aa10.82□□□□□ -0.68
ITGB4-209ENST00000583327 RANBP3Q9H6Z4 567 aaPredicted RBP10.82□□□□□ -0.68
ITGB4-209ENST00000583327 PRNDQ9UKY0 176 aa10.82□□□□□ -0.68
ITGB4-209ENST00000583327 ZNF257Q9Y2Q1 563 aa10.82□□□□□ -0.68
ITGB4-209ENST00000583327 FN1P02751 2386 aaKnown RBP10.81□□□□□ -0.68
ITGB4-209ENST00000583327 IGHV7-81A0A0B4J1V7 117 aa10.81□□□□□ -0.68
ITGB4-209ENST00000583327 TEX50A0A1B0GTY4 177 aa10.81□□□□□ -0.68
ITGB4-209ENST00000583327 A0A1B0GW64 132 aa10.81□□□□□ -0.68
ITGB4-209ENST00000583327 CGB1A6NKQ9 187 aa10.81□□□□□ -0.68
ITGB4-209ENST00000583327 C15orf61A6NNL5 157 aa10.81□□□□□ -0.68
ITGB4-209ENST00000583327 E7EUB6 86 aa10.81□□□□□ -0.68
ITGB4-209ENST00000583327 CCSO14618 274 aa10.81□□□□□ -0.68
ITGB4-209ENST00000583327 SNAPC5O75971 98 aa10.81□□□□□ -0.68
ITGB4-209ENST00000583327 TRAPPC2P0DI81 140 aa10.81□□□□□ -0.68
ITGB4-209ENST00000583327 TRAPPC2BP0DI82 140 aa10.81□□□□□ -0.68
ITGB4-209ENST00000583327 EGR2P11161 476 aaPredicted RBP10.81□□□□□ -0.68
ITGB4-209ENST00000583327 RPL8P62917 257 aaKnown RBP10.81□□□□□ -0.68
ITGB4-209ENST00000583327 UBA52P62987 128 aaKnown RBP10.81□□□□□ -0.68
ITGB4-209ENST00000583327 CX3CL1P78423 397 aa10.81□□□□□ -0.68
ITGB4-209ENST00000583327 GSG1LQ6UXU4 331 aa10.81□□□□□ -0.68
ITGB4-209ENST00000583327 Q8N2B8 174 aa10.81□□□□□ -0.68
ITGB4-209ENST00000583327 ZBTB8BQ8NAP8 495 aaPredicted RBP10.81□□□□□ -0.68
ITGB4-209ENST00000583327 JMJD8Q96S16 334 aa10.81□□□□□ -0.68
ITGB4-209ENST00000583327 RASL11BQ9BPW5 248 aa10.81□□□□□ -0.68
ITGB4-209ENST00000583327 QTRT1Q9BXR0 403 aaKnown RBP10.81□□□□□ -0.68
ITGB4-209ENST00000583327 FKBP11Q9NYL4 201 aa10.81□□□□□ -0.68
ITGB4-209ENST00000583327 CACNG5Q9UF02 275 aa10.81□□□□□ -0.68
ITGB4-209ENST00000583327 NSG2Q9Y328 171 aa10.81□□□□□ -0.68
ITGB4-209ENST00000583327 NSD1Q96L73 2696 aaPredicted RBP10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms