RNA–Protein interactions for RNA: ENST00000578595.1

SS18-209, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 406 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-209ENST00000578595 CD3DP04234 171 aa15.15■□□□□ 0.02
SS18-209ENST00000578595 ERVK-16P61578 105 aa15.15■□□□□ 0.02
SS18-209ENST00000578595 DEFA5Q01523 94 aa15.15■□□□□ 0.02
SS18-209ENST00000578595 LPCAT3Q6P1A2 487 aa15.15■□□□□ 0.02
SS18-209ENST00000578595 OR1N2Q8NGR9 330 aa15.15■□□□□ 0.02
SS18-209ENST00000578595 CD300LFQ8TDQ1 290 aa15.15■□□□□ 0.02
SS18-209ENST00000578595 TMEM68Q96MH6 324 aa15.15■□□□□ 0.02
SS18-209ENST00000578595 FYTTD1Q96QD9 318 aaKnown RBP15.15■□□□□ 0.02
SS18-209ENST00000578595 MCRIP2Q9BUT9 160 aaKnown RBP15.15■□□□□ 0.02
SS18-209ENST00000578595 GPR61Q9BZJ8 451 aa15.15■□□□□ 0.02
SS18-209ENST00000578595 MTFP1Q9UDX5 166 aa15.15■□□□□ 0.02
SS18-209ENST00000578595 C13orf42A0A1B0GVH6 325 aa15.14■□□□□ 0.01
SS18-209ENST00000578595 DPPA5A6NC42 116 aa15.14■□□□□ 0.01
SS18-209ENST00000578595 GABARAPH6UMI1 98 aa15.14■□□□□ 0.01
SS18-209ENST00000578595 RBFOX2O43251 390 aaKnown RBP eCLIP15.14■□□□□ 0.01
SS18-209ENST00000578595 WIPF1O43516 503 aa15.14■□□□□ 0.01
SS18-209ENST00000578595 PGLYRP1O75594 196 aaPredicted RBP15.14■□□□□ 0.01
SS18-209ENST00000578595 TPPPO94811 219 aa15.14■□□□□ 0.01
SS18-209ENST00000578595 S1PR2O95136 353 aa15.14■□□□□ 0.01
SS18-209ENST00000578595 OR8U8P0C7N1 319 aa15.14■□□□□ 0.01
SS18-209ENST00000578595 NQO2P16083 231 aa15.14■□□□□ 0.01
SS18-209ENST00000578595 RPL27AP46776 148 aaKnown RBP15.14■□□□□ 0.01
SS18-209ENST00000578595 BRWD1-AS2P59051 145 aa15.14■□□□□ 0.01
SS18-209ENST00000578595 TAS2R19P59542 299 aa15.14■□□□□ 0.01
SS18-209ENST00000578595 MRPS10P82664 201 aaKnown RBP15.14■□□□□ 0.01
SS18-209ENST00000578595 ZNF616Q08AN1 781 aa15.14■□□□□ 0.01
SS18-209ENST00000578595 SCGB2B2Q4G0G5 96 aa15.14■□□□□ 0.01
SS18-209ENST00000578595 VAX1Q5SQQ9 334 aa15.14■□□□□ 0.01
SS18-209ENST00000578595 OR4A47Q6IF82 309 aa15.14■□□□□ 0.01
SS18-209ENST00000578595 TMEM167AQ8TBQ9 72 aa15.14■□□□□ 0.01
SS18-209ENST00000578595 SPIN2AQ99865 258 aa15.14■□□□□ 0.01
SS18-209ENST00000578595 SPIN2BQ9BPZ2 258 aa15.14■□□□□ 0.01
SS18-209ENST00000578595 SLIRPQ9GZT3 109 aaKnown RBP15.14■□□□□ 0.01
SS18-209ENST00000578595 RSL24D1Q9UHA3 163 aaKnown RBP15.14■□□□□ 0.01
SS18-209ENST00000578595 RAB3DO95716 219 aa15.13■□□□□ 0.01
SS18-209ENST00000578595 LGALS1P09382 135 aaKnown RBP15.13■□□□□ 0.01
SS18-209ENST00000578595 PPP5CP53041 499 aa15.13■□□□□ 0.01
SS18-209ENST00000578595 TAS2R31P59538 309 aa15.13■□□□□ 0.01
SS18-209ENST00000578595 KIAA0141Q14154 515 aaPredicted RBP15.13■□□□□ 0.01
SS18-209ENST00000578595 MRGPRG-AS1Q2M3A8 158 aa15.13■□□□□ 0.01
SS18-209ENST00000578595 ASPHD1Q5U4P2 390 aa15.13■□□□□ 0.01
SS18-209ENST00000578595 FOXB2Q5VYV0 432 aa15.13■□□□□ 0.01
SS18-209ENST00000578595 PUSL1Q8N0Z8 303 aaKnown RBP15.13■□□□□ 0.01
SS18-209ENST00000578595 H3BUA1 57 aa15.12■□□□□ 0.01
SS18-209ENST00000578595 I3L521 148 aa15.12■□□□□ 0.01
SS18-209ENST00000578595 OR9G9P0C7N8 305 aa15.12■□□□□ 0.01
SS18-209ENST00000578595 TBPP20226 339 aa15.12■□□□□ 0.01
SS18-209ENST00000578595 F2RP25116 425 aa15.12■□□□□ 0.01
SS18-209ENST00000578595 HOXD3P31249 432 aaPredicted RBP15.12■□□□□ 0.01
SS18-209ENST00000578595 LPAR6P43657 344 aa15.12■□□□□ 0.01
SS18-209ENST00000578595 RPL8P62917 257 aaKnown RBP15.12■□□□□ 0.01
SS18-209ENST00000578595 PDLIM3Q53GG5 364 aaPredicted RBP15.12■□□□□ 0.01
SS18-209ENST00000578595 SLC38A6Q8IZM9 456 aa15.12■□□□□ 0.01
SS18-209ENST00000578595 ARRDC1Q8N5I2 433 aa15.12■□□□□ 0.01
SS18-209ENST00000578595 DGCR14Q96DF8 476 aaKnown RBP15.12■□□□□ 0.01
SS18-209ENST00000578595 PLEKHA2Q9HB19 425 aa15.12■□□□□ 0.01
SS18-209ENST00000578595 TMEM140Q9NV12 185 aa15.12■□□□□ 0.01
SS18-209ENST00000578595 COMMD9Q9P000 198 aa15.12■□□□□ 0.01
SS18-209ENST00000578595 IGHV4OR15-8A0A075B7B6 117 aa15.11■□□□□ 0.01
SS18-209ENST00000578595 A0A087WW49 117 aa15.11■□□□□ 0.01
SS18-209ENST00000578595 A0A0G2JLM5 398 aa15.11■□□□□ 0.01
SS18-209ENST00000578595 HMX3A6NHT5 357 aa15.11■□□□□ 0.01
SS18-209ENST00000578595 MAS1LP35410 378 aa15.11■□□□□ 0.01
SS18-209ENST00000578595 STEAP1BQ6NZ63 245 aa15.11■□□□□ 0.01
SS18-209ENST00000578595 TBC1D26Q86UD7 250 aa15.11■□□□□ 0.01
SS18-209ENST00000578595 TMEM229BQ8NBD8 167 aa15.11■□□□□ 0.01
SS18-209ENST00000578595 SMIM4Q8WVI0 70 aa15.11■□□□□ 0.01
SS18-209ENST00000578595 RSRP1Q9BUV0 290 aa15.11■□□□□ 0.01
SS18-209ENST00000578595 BET1LQ9NYM9 111 aa15.11■□□□□ 0.01
SS18-209ENST00000578595 RABL2AQ9UBK7 228 aaPredicted RBP15.11■□□□□ 0.01
SS18-209ENST00000578595 RABL2BQ9UNT1 228 aa15.11■□□□□ 0.01
SS18-209ENST00000578595 FABP12A6NFH5 140 aa15.1■□□□□ 0.01
SS18-209ENST00000578595 SEC14L6B5MCN3 397 aa15.1■□□□□ 0.01
SS18-209ENST00000578595 LINC01619G3V211 115 aa15.1■□□□□ 0.01
SS18-209ENST00000578595 HLA-GP17693 338 aa15.1■□□□□ 0.01
SS18-209ENST00000578595 S100A5P33763 92 aa15.1■□□□□ 0.01
SS18-209ENST00000578595 SLURP1P55000 103 aa15.1■□□□□ 0.01
SS18-209ENST00000578595 RUNX1Q01196 453 aa15.1■□□□□ 0.01
SS18-209ENST00000578595 SSBP1Q04837 148 aaKnown RBP15.1■□□□□ 0.01
SS18-209ENST00000578595 KPRPQ5T749 579 aaPredicted RBP15.1■□□□□ 0.01
SS18-209ENST00000578595 FAAP20Q6NZ36 180 aa15.1■□□□□ 0.01
SS18-209ENST00000578595 OR4D10Q8NGI6 311 aa15.1■□□□□ 0.01
SS18-209ENST00000578595 OR4A5Q8NH83 315 aa15.1■□□□□ 0.01
SS18-209ENST00000578595 ANKRD34BA5PLL1 514 aa15.09■□□□□ 0.01
SS18-209ENST00000578595 MARCH11A6NNE9 402 aa15.09■□□□□ 0.01
SS18-209ENST00000578595 KRASP01116 189 aa15.09■□□□□ 0.01
SS18-209ENST00000578595 PRH1P02810 166 aa15.09■□□□□ 0.01
SS18-209ENST00000578595 MYOD1P15172 320 aa15.09■□□□□ 0.01
SS18-209ENST00000578595 PI3P19957 117 aa15.09■□□□□ 0.01
SS18-209ENST00000578595 TNFSF8P32971 234 aa15.09■□□□□ 0.01
SS18-209ENST00000578595 UCP3P55916 312 aa15.09■□□□□ 0.01
SS18-209ENST00000578595 FHL3Q13643 280 aa15.09■□□□□ 0.01
SS18-209ENST00000578595 MEF2DQ14814 521 aa15.09■□□□□ 0.01
SS18-209ENST00000578595 SLC25A42Q86VD7 318 aa15.09■□□□□ 0.01
SS18-209ENST00000578595 ADAD2Q8NCV1 583 aaKnown RBP15.09■□□□□ 0.01
SS18-209ENST00000578595 COMMD5Q9GZQ3 224 aa15.09■□□□□ 0.01
SS18-209ENST00000578595 SLC2A9Q9NRM0 540 aa15.09■□□□□ 0.01
SS18-209ENST00000578595 DISC1C4P0D8 188 aa15.08■□□□□ 0
SS18-209ENST00000578595 AKAIN1P0CW23 69 aa15.08■□□□□ 0
SS18-209ENST00000578595 G6PCP35575 357 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms