RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 Q0VFX4 171 aa8.06□□□□□ -1.12
CCDC40-212ENST00000574799 FADS6Q8N9I5 356 aa8.06□□□□□ -1.12
CCDC40-212ENST00000574799 OR5A2Q8NGI9 324 aa8.06□□□□□ -1.12
CCDC40-212ENST00000574799 IGHV2-70DA0A0C4DH43 119 aa8.06□□□□□ -1.12
CCDC40-212ENST00000574799 K7EP13 123 aa8.06□□□□□ -1.12
CCDC40-212ENST00000574799 OR7C2O60412 319 aa8.06□□□□□ -1.12
CCDC40-212ENST00000574799 IGKV1-5P01602 117 aa8.06□□□□□ -1.12
CCDC40-212ENST00000574799 MIC13Q5XKP0 118 aa8.06□□□□□ -1.12
CCDC40-212ENST00000574799 SLC23A3Q6PIS1 610 aa8.06□□□□□ -1.12
CCDC40-212ENST00000574799 C1orf210Q8IVY1 113 aa8.06□□□□□ -1.12
CCDC40-212ENST00000574799 OR5B3Q8NH48 314 aa8.06□□□□□ -1.12
CCDC40-212ENST00000574799 OR2T6Q8NHC8 308 aa8.06□□□□□ -1.12
CCDC40-212ENST00000574799 LOC105371242A0A075B767 164 aa8.06□□□□□ -1.12
CCDC40-212ENST00000574799 A0A096LPE4 126 aa8.06□□□□□ -1.12
CCDC40-212ENST00000574799 A0A1W2PPZ6 126 aa8.06□□□□□ -1.12
CCDC40-212ENST00000574799 CTSSP25774 331 aa8.06□□□□□ -1.12
CCDC40-212ENST00000574799 CD1BP29016 333 aa8.06□□□□□ -1.12
CCDC40-212ENST00000574799 TMEM144Q7Z5S9 345 aa8.06□□□□□ -1.12
CCDC40-212ENST00000574799 SPRY4Q9C004 299 aa8.06□□□□□ -1.12
CCDC40-212ENST00000574799 RELNP78509 3460 aa8.05□□□□□ -1.12
CCDC40-212ENST00000574799 TRAV9-2A0A087WT02 112 aa8.05□□□□□ -1.12
CCDC40-212ENST00000574799 HELTA6NFD8 242 aa8.05□□□□□ -1.12
CCDC40-212ENST00000574799 OR2T8A6NH00 312 aa8.05□□□□□ -1.12
CCDC40-212ENST00000574799 ANKRD30BLA7E2S9 258 aa8.05□□□□□ -1.12
CCDC40-212ENST00000574799 CA2P00918 260 aa8.05□□□□□ -1.12
CCDC40-212ENST00000574799 RPL24P83731 157 aaKnown RBP8.05□□□□□ -1.12
CCDC40-212ENST00000574799 CRIP3Q6Q6R5 217 aa8.05□□□□□ -1.12
CCDC40-212ENST00000574799 PQLC2Q6ZP29 291 aa8.05□□□□□ -1.12
CCDC40-212ENST00000574799 OR4P4Q8NGL7 312 aa8.05□□□□□ -1.12
CCDC40-212ENST00000574799 OR1L1Q8NH94 360 aa8.05□□□□□ -1.12
CCDC40-212ENST00000574799 NANOS1Q8WY41 292 aaKnown RBP8.05□□□□□ -1.12
CCDC40-212ENST00000574799 FOXB1Q99853 325 aa8.05□□□□□ -1.12
CCDC40-212ENST00000574799 TECRQ9NZ01 308 aaKnown RBP8.05□□□□□ -1.12
CCDC40-212ENST00000574799 IL36GQ9NZH8 169 aa8.05□□□□□ -1.12
CCDC40-212ENST00000574799 MGAQ8IWI9 3026 aa8.05□□□□□ -1.12
CCDC40-212ENST00000574799 A0A1W2PS18 150 aa8.05□□□□□ -1.12
CCDC40-212ENST00000574799 CXorf1O96002 111 aa8.05□□□□□ -1.12
CCDC40-212ENST00000574799 FRMD6-AS1P0C7T7 363 aa8.05□□□□□ -1.12
CCDC40-212ENST00000574799 MFAP2P55001 183 aa8.05□□□□□ -1.12
CCDC40-212ENST00000574799 FGF12P61328 243 aa8.05□□□□□ -1.12
CCDC40-212ENST00000574799 UBE2G1P62253 170 aa8.05□□□□□ -1.12
CCDC40-212ENST00000574799 PSG4Q00888 419 aa8.05□□□□□ -1.12
CCDC40-212ENST00000574799 FAM27BQ5VT28 67 aa8.05□□□□□ -1.12
CCDC40-212ENST00000574799 RCHY1Q96PM5 261 aa8.05□□□□□ -1.12
CCDC40-212ENST00000574799 OR8B2Q96RD0 313 aa8.05□□□□□ -1.12
CCDC40-212ENST00000574799 CLEC7AQ9BXN2 247 aa8.05□□□□□ -1.12
CCDC40-212ENST00000574799 OR2D2Q9H210 308 aa8.05□□□□□ -1.12
CCDC40-212ENST00000574799 NCOR1P1Q9H4R4 102 aa8.05□□□□□ -1.12
CCDC40-212ENST00000574799 MRPS16Q9Y3D3 137 aaKnown RBP8.05□□□□□ -1.12
CCDC40-212ENST00000574799 GAGE12BA1L429 117 aa8.05□□□□□ -1.12
CCDC40-212ENST00000574799 C5orf49A4QMS7 147 aa8.05□□□□□ -1.12
CCDC40-212ENST00000574799 C3orf80F5H4A9 247 aa8.05□□□□□ -1.12
CCDC40-212ENST00000574799 SYNGR1O43759 233 aa8.05□□□□□ -1.12
CCDC40-212ENST00000574799 HLA-DQA1P01909 254 aa8.05□□□□□ -1.12
CCDC40-212ENST00000574799 UQCRFS1P47985 274 aa8.05□□□□□ -1.12
CCDC40-212ENST00000574799 PLPPR2Q96GM1 343 aa8.05□□□□□ -1.12
CCDC40-212ENST00000574799 ENY2Q9NPA8 101 aa8.05□□□□□ -1.12
CCDC40-212ENST00000574799 DEPPQ9NTK1 212 aa8.05□□□□□ -1.12
CCDC40-212ENST00000574799 IGKV1-6A0A0C4DH72 117 aa8.04□□□□□ -1.12
CCDC40-212ENST00000574799 CER1O95813 267 aa8.04□□□□□ -1.12
CCDC40-212ENST00000574799 WNT2P09544 360 aa8.04□□□□□ -1.12
CCDC40-212ENST00000574799 ZNF83P51522 516 aa8.04□□□□□ -1.12
CCDC40-212ENST00000574799 TRIM61Q5EBN2 209 aa8.04□□□□□ -1.12
CCDC40-212ENST00000574799 PRAMEF5Q5TYX0 476 aa8.04□□□□□ -1.12
CCDC40-212ENST00000574799 PRAMEF6Q5VXH4 476 aa8.04□□□□□ -1.12
CCDC40-212ENST00000574799 SLC25A34Q6PIV7 304 aa8.04□□□□□ -1.12
CCDC40-212ENST00000574799 C12orf54Q6X4T0 127 aa8.04□□□□□ -1.12
CCDC40-212ENST00000574799 CENPVQ7Z7K6 275 aaPredicted RBP8.04□□□□□ -1.12
CCDC40-212ENST00000574799 VASH2Q86V25 355 aa8.04□□□□□ -1.12
CCDC40-212ENST00000574799 CHRDL1Q9BU40 450 aa8.04□□□□□ -1.12
CCDC40-212ENST00000574799 CSTL1Q9H114 145 aa8.04□□□□□ -1.12
CCDC40-212ENST00000574799 RNASE7Q9H1E1 156 aaKnown RBP8.04□□□□□ -1.12
CCDC40-212ENST00000574799 TP53TG3Q9ULZ0 132 aa8.04□□□□□ -1.12
CCDC40-212ENST00000574799 TRBV9A0A0B4J1U6 114 aa8.04□□□□□ -1.12
CCDC40-212ENST00000574799 MLNRO43193 412 aa8.04□□□□□ -1.12
CCDC40-212ENST00000574799 Q0VG73 95 aa8.04□□□□□ -1.12
CCDC40-212ENST00000574799 OR4A16Q8NH70 328 aa8.04□□□□□ -1.12
CCDC40-212ENST00000574799 ABHD3Q8WU67 409 aa8.04□□□□□ -1.12
CCDC40-212ENST00000574799 SSBP3Q9BWW4 388 aaPredicted RBP8.04□□□□□ -1.12
CCDC40-212ENST00000574799 CRIM1Q9NZV1 1036 aa8.04□□□□□ -1.12
CCDC40-212ENST00000574799 RNF114Q9Y508 228 aa8.04□□□□□ -1.12
CCDC40-212ENST00000574799 SNAI2O43623 268 aa8.04□□□□□ -1.12
CCDC40-212ENST00000574799 CA7P43166 264 aa8.04□□□□□ -1.12
CCDC40-212ENST00000574799 PLP2Q04941 152 aa8.04□□□□□ -1.12
CCDC40-212ENST00000574799 RSPO1Q2MKA7 263 aaPredicted RBP8.04□□□□□ -1.12
CCDC40-212ENST00000574799 ZNF841Q6ZN19 808 aa8.04□□□□□ -1.12
CCDC40-212ENST00000574799 WFDC8Q8IUA0 241 aa8.04□□□□□ -1.12
CCDC40-212ENST00000574799 PNKDQ8N490 385 aa8.04□□□□□ -1.12
CCDC40-212ENST00000574799 HS3ST6Q96QI5 342 aa8.04□□□□□ -1.12
CCDC40-212ENST00000574799 PRRG4Q9BZD6 226 aa8.04□□□□□ -1.12
CCDC40-212ENST00000574799 WDR54Q9H977 334 aa8.04□□□□□ -1.12
CCDC40-212ENST00000574799 RARRES3Q9UL19 164 aa8.04□□□□□ -1.12
CCDC40-212ENST00000574799 R4GN57 208 aa8.04□□□□□ -1.12
CCDC40-212ENST00000574799 OR4C46A6NHA9 309 aa8.03□□□□□ -1.12
CCDC40-212ENST00000574799 TMPRSS2O15393 492 aa8.03□□□□□ -1.12
CCDC40-212ENST00000574799 CRYBB3P26998 211 aa8.03□□□□□ -1.12
CCDC40-212ENST00000574799 PSG5Q15238 335 aa8.03□□□□□ -1.12
CCDC40-212ENST00000574799 CENPWQ5EE01 88 aa8.03□□□□□ -1.12
CCDC40-212ENST00000574799 PRR31Q5SQ13 230 aa8.03□□□□□ -1.12
CCDC40-212ENST00000574799 GTF2H5Q6ZYL4 71 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms