RNA–Protein interactions for RNA: ENST00000574054.1

CHRNB1-206, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-206ENST00000574054 SECTM1Q8WVN6 248 aa16.04■□□□□ 0.16
CHRNB1-206ENST00000574054 ISOC1Q96CN7 298 aa16.04■□□□□ 0.16
CHRNB1-206ENST00000574054 SPATA25Q9BR10 227 aa16.04■□□□□ 0.16
CHRNB1-206ENST00000574054 THAP7Q9BT49 309 aaPredicted RBP16.04■□□□□ 0.16
CHRNB1-206ENST00000574054 YTHDF1Q9BYJ9 559 aaKnown RBP16.04■□□□□ 0.16
CHRNB1-206ENST00000574054 RNF167Q9H6Y7 350 aa16.04■□□□□ 0.16
CHRNB1-206ENST00000574054 ZNF257Q9Y2Q1 563 aa16.04■□□□□ 0.16
CHRNB1-206ENST00000574054 PPP5D1E7EU14 171 aa16.03■□□□□ 0.16
CHRNB1-206ENST00000574054 TNFSF12O43508 249 aa16.03■□□□□ 0.16
CHRNB1-206ENST00000574054 IL6RP08887 468 aaPredicted RBP16.03■□□□□ 0.16
CHRNB1-206ENST00000574054 PTHLHP12272 177 aa16.03■□□□□ 0.16
CHRNB1-206ENST00000574054 EIF4EBP1Q13541 118 aaPredicted RBP16.03■□□□□ 0.16
CHRNB1-206ENST00000574054 ZNF66Q6ZN08 573 aa16.03■□□□□ 0.16
CHRNB1-206ENST00000574054 PUSL1Q8N0Z8 303 aaKnown RBP16.03■□□□□ 0.16
CHRNB1-206ENST00000574054 GVQW1Q8N7I0 195 aa16.03■□□□□ 0.16
CHRNB1-206ENST00000574054 BEST4Q8NFU0 473 aa16.03■□□□□ 0.16
CHRNB1-206ENST00000574054 TMEM167AQ8TBQ9 72 aa16.03■□□□□ 0.16
CHRNB1-206ENST00000574054 FBXL7Q9UJT9 491 aa16.03■□□□□ 0.16
CHRNB1-206ENST00000574054 RYR2Q92736 4967 aa16.02■□□□□ 0.16
CHRNB1-206ENST00000574054 HRASP01112 189 aa16.02■□□□□ 0.16
CHRNB1-206ENST00000574054 HLA-AP01891 365 aaKnown RBP16.02■□□□□ 0.16
CHRNB1-206ENST00000574054 FCGR2CP31995 323 aa16.02■□□□□ 0.16
CHRNB1-206ENST00000574054 MAS1LP35410 378 aa16.02■□□□□ 0.16
CHRNB1-206ENST00000574054 KIR2DS2P43631 304 aa16.02■□□□□ 0.16
CHRNB1-206ENST00000574054 CD81P60033 236 aa16.02■□□□□ 0.16
CHRNB1-206ENST00000574054 CD300EQ496F6 205 aaPredicted RBP16.02■□□□□ 0.16
CHRNB1-206ENST00000574054 OR2K2Q8NGT1 345 aa16.02■□□□□ 0.16
CHRNB1-206ENST00000574054 SLC25A38Q96DW6 304 aa16.02■□□□□ 0.16
CHRNB1-206ENST00000574054 ETV7Q9Y603 341 aa16.02■□□□□ 0.16
CHRNB1-206ENST00000574054 NPIPB5A8MRT5 1133 aa16.01■□□□□ 0.15
CHRNB1-206ENST00000574054 IGHV3-23P01764 117 aa16.01■□□□□ 0.15
CHRNB1-206ENST00000574054 FCER2P06734 321 aa16.01■□□□□ 0.15
CHRNB1-206ENST00000574054 BRWD1-AS2P59051 145 aa16.01■□□□□ 0.15
CHRNB1-206ENST00000574054 FAM209BQ5JX69 171 aa16.01■□□□□ 0.15
CHRNB1-206ENST00000574054 ADAMTSL5Q6ZMM2 481 aa16.01■□□□□ 0.15
CHRNB1-206ENST00000574054 OR13F1Q8NGS4 319 aa16.01■□□□□ 0.15
CHRNB1-206ENST00000574054 KCTD12Q96CX2 325 aaKnown RBP16.01■□□□□ 0.15
CHRNB1-206ENST00000574054 PLEKHA3Q9HB20 300 aa16.01■□□□□ 0.15
CHRNB1-206ENST00000574054 CCL28Q9NRJ3 127 aa16.01■□□□□ 0.15
CHRNB1-206ENST00000574054 SLC2A9Q9NRM0 540 aa16.01■□□□□ 0.15
CHRNB1-206ENST00000574054 A0A1B0GW64 132 aa16■□□□□ 0.15
CHRNB1-206ENST00000574054 E7EUB6 86 aa16■□□□□ 0.15
CHRNB1-206ENST00000574054 OR2C1O95371 312 aa16■□□□□ 0.15
CHRNB1-206ENST00000574054 AREGP15514 252 aa16■□□□□ 0.15
CHRNB1-206ENST00000574054 MECP2P51608 486 aaKnown RBP16■□□□□ 0.15
CHRNB1-206ENST00000574054 SCAND1P57086 179 aa16■□□□□ 0.15
CHRNB1-206ENST00000574054 RPL8P62917 257 aaKnown RBP16■□□□□ 0.15
CHRNB1-206ENST00000574054 NEDD8Q15843 81 aa16■□□□□ 0.15
CHRNB1-206ENST00000574054 HOGA1Q86XE5 327 aa16■□□□□ 0.15
CHRNB1-206ENST00000574054 S4R3C0 116 aa16■□□□□ 0.15
CHRNB1-206ENST00000574054 GGCTO75223 188 aaKnown RBP15.99■□□□□ 0.15
CHRNB1-206ENST00000574054 TPPPO94811 219 aa15.99■□□□□ 0.15
CHRNB1-206ENST00000574054 NDUFB8O95169 186 aa15.99■□□□□ 0.15
CHRNB1-206ENST00000574054 DHFRP00374 187 aa15.99■□□□□ 0.15
CHRNB1-206ENST00000574054 PPYP01298 95 aa15.99■□□□□ 0.15
CHRNB1-206ENST00000574054 IFNA6P05013 189 aa15.99■□□□□ 0.15
CHRNB1-206ENST00000574054 REG1AP05451 166 aa15.99■□□□□ 0.15
CHRNB1-206ENST00000574054 ZNF735P0CB33 412 aa15.99■□□□□ 0.15
CHRNB1-206ENST00000574054 MYOD1P15172 320 aa15.99■□□□□ 0.15
CHRNB1-206ENST00000574054 FXYD4P59646 89 aa15.99■□□□□ 0.15
CHRNB1-206ENST00000574054 GUCA2BQ16661 112 aa15.99■□□□□ 0.15
CHRNB1-206ENST00000574054 NEURL2Q9BR09 285 aa15.99■□□□□ 0.15
CHRNB1-206ENST00000574054 SLC5A7Q9GZV3 580 aa15.99■□□□□ 0.15
CHRNB1-206ENST00000574054 EDA2RQ9HAV5 297 aa15.99■□□□□ 0.15
CHRNB1-206ENST00000574054 HRASLSQ9HDD0 168 aa15.99■□□□□ 0.15
CHRNB1-206ENST00000574054 GAR1Q9NY12 217 aaKnown RBP15.99■□□□□ 0.15
CHRNB1-206ENST00000574054 SACSQ9NZJ4 4579 aa15.99■□□□□ 0.15
CHRNB1-206ENST00000574054 C2orf70A6NJV1 201 aa15.98■□□□□ 0.15
CHRNB1-206ENST00000574054 SULT1C2O00338 296 aa15.98■□□□□ 0.15
CHRNB1-206ENST00000574054 DEFA4P12838 97 aa15.98■□□□□ 0.15
CHRNB1-206ENST00000574054 FOLR2P14207 255 aa15.98■□□□□ 0.15
CHRNB1-206ENST00000574054 HLA-GP17693 338 aa15.98■□□□□ 0.15
CHRNB1-206ENST00000574054 EDN2P20800 178 aa15.98■□□□□ 0.15
CHRNB1-206ENST00000574054 PSMB6P28072 239 aa15.98■□□□□ 0.15
CHRNB1-206ENST00000574054 ARL3P36405 182 aa15.98■□□□□ 0.15
CHRNB1-206ENST00000574054 CLEC19AQ6UXS0 136 aa15.98■□□□□ 0.15
CHRNB1-206ENST00000574054 SPAG16Q8N0X2 631 aa15.98■□□□□ 0.15
CHRNB1-206ENST00000574054 AUNIPQ9H7T9 357 aa15.98■□□□□ 0.15
CHRNB1-206ENST00000574054 RETNQ9HD89 108 aa15.98■□□□□ 0.15
CHRNB1-206ENST00000574054 DIABLOQ9NR28 239 aa15.98■□□□□ 0.15
CHRNB1-206ENST00000574054 SLC2A8Q9NY64 477 aa15.98■□□□□ 0.15
CHRNB1-206ENST00000574054 CSMD3Q7Z407 3707 aa15.98■□□□□ 0.15
CHRNB1-206ENST00000574054 STARD9Q9P2P6 4700 aa15.98■□□□□ 0.15
CHRNB1-206ENST00000574054 A0A0A6YYH2 397 aa15.97■□□□□ 0.15
CHRNB1-206ENST00000574054 A6NJ64 397 aa15.97■□□□□ 0.15
CHRNB1-206ENST00000574054 MSMO1Q15800 293 aa15.97■□□□□ 0.15
CHRNB1-206ENST00000574054 DEFB114Q30KQ6 69 aa15.97■□□□□ 0.15
CHRNB1-206ENST00000574054 TIMM50Q3ZCQ8 353 aa15.97■□□□□ 0.15
CHRNB1-206ENST00000574054 OR4A47Q6IF82 309 aa15.97■□□□□ 0.15
CHRNB1-206ENST00000574054 LAX1Q8IWV1 398 aa15.97■□□□□ 0.15
CHRNB1-206ENST00000574054 OR4A5Q8NH83 315 aa15.97■□□□□ 0.15
CHRNB1-206ENST00000574054 EEF1AKMT3Q96AZ1 226 aa15.97■□□□□ 0.15
CHRNB1-206ENST00000574054 FANCD2OSQ96PS1 177 aa15.97■□□□□ 0.15
CHRNB1-206ENST00000574054 AIFM2Q9BRQ8 373 aa15.97■□□□□ 0.15
CHRNB1-206ENST00000574054 DMRT1Q9Y5R6 373 aa15.97■□□□□ 0.15
CHRNB1-206ENST00000574054 CEPT1Q9Y6K0 416 aa15.97■□□□□ 0.15
CHRNB1-206ENST00000574054 MEIS3P1A6NDR6 274 aa15.96■□□□□ 0.15
CHRNB1-206ENST00000574054 ZNF785A8K8V0 405 aa15.96■□□□□ 0.15
CHRNB1-206ENST00000574054 CRYGCP07315 174 aa15.96■□□□□ 0.15
CHRNB1-206ENST00000574054 CATR1Q13166 79 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms