RNA–Protein interactions for RNA: ENST00000572949.5

USP6-204, Transcript of ubiquitin specific peptidase 6, humanhuman

TSL 2

Gene USP6, Length 7,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-204ENST00000572949 CMC4P56277 68 aaPredicted RBP8.1□□□□□ -1.11
USP6-204ENST00000572949 CFHR1Q03591 330 aa8.1□□□□□ -1.11
USP6-204ENST00000572949 FAM89BQ8N5H3 189 aa8.1□□□□□ -1.11
USP6-204ENST00000572949 CGB7P0DN87 165 aa8.1□□□□□ -1.11
USP6-204ENST00000572949 ERVK11-1P61568 191 aa8.1□□□□□ -1.11
USP6-204ENST00000572949 RPS11P62280 158 aaKnown RBP eCLIP8.1□□□□□ -1.11
USP6-204ENST00000572949 IGSF11Q5DX21 431 aa8.1□□□□□ -1.11
USP6-204ENST00000572949 SAPCD1Q5SSQ6 148 aa8.1□□□□□ -1.11
USP6-204ENST00000572949 RTN4RL2Q86UN3 420 aa8.1□□□□□ -1.11
USP6-204ENST00000572949 VKORC1L1Q8N0U8 176 aa8.1□□□□□ -1.11
USP6-204ENST00000572949 CLRN3Q8NCR9 226 aa8.1□□□□□ -1.11
USP6-204ENST00000572949 TMEM54Q969K7 222 aa8.1□□□□□ -1.11
USP6-204ENST00000572949 SPTAN1Q13813 2472 aaKnown RBP8.1□□□□□ -1.11
USP6-204ENST00000572949 PITX3O75364 302 aa8.1□□□□□ -1.11
USP6-204ENST00000572949 SCMH1Q96GD3 660 aa8.1□□□□□ -1.11
USP6-204ENST00000572949 KCNE5Q9UJ90 142 aa8.1□□□□□ -1.11
USP6-204ENST00000572949 LHBP01229 141 aa8.1□□□□□ -1.11
USP6-204ENST00000572949 COX6A1P12074 109 aa8.1□□□□□ -1.11
USP6-204ENST00000572949 FOXA2Q9Y261 457 aaPredicted RBP8.1□□□□□ -1.11
USP6-204ENST00000572949 HS3ST3B1Q9Y662 390 aa8.1□□□□□ -1.11
USP6-204ENST00000572949 SHANK3Q9BYB0 1731 aa8.1□□□□□ -1.11
USP6-204ENST00000572949 ATP5LO75964 103 aa8.1□□□□□ -1.11
USP6-204ENST00000572949 EFNB1P98172 346 aa8.1□□□□□ -1.11
USP6-204ENST00000572949 PQLC2Q6ZP29 291 aa8.1□□□□□ -1.11
USP6-204ENST00000572949 OR5AN1Q8NGI8 311 aa8.1□□□□□ -1.11
USP6-204ENST00000572949 REPIN1Q9BWE0 567 aaKnown RBP8.1□□□□□ -1.11
USP6-204ENST00000572949 TUBD1Q9UJT1 453 aa8.1□□□□□ -1.11
USP6-204ENST00000572949 HSF4Q9ULV5 492 aa8.1□□□□□ -1.11
USP6-204ENST00000572949 ARAP2Q8WZ64 1704 aa8.09□□□□□ -1.11
USP6-204ENST00000572949 SCTP09683 121 aa8.09□□□□□ -1.11
USP6-204ENST00000572949 CKS1BP61024 79 aa8.09□□□□□ -1.11
USP6-204ENST00000572949 LBHQ53QV2 105 aaPredicted RBP8.09□□□□□ -1.11
USP6-204ENST00000572949 CST9LQ9H4G1 147 aa8.09□□□□□ -1.11
USP6-204ENST00000572949 HMX2A2RU54 273 aa8.09□□□□□ -1.11
USP6-204ENST00000572949 H0Y980 276 aa8.09□□□□□ -1.11
USP6-204ENST00000572949 CD7P09564 240 aa8.09□□□□□ -1.11
USP6-204ENST00000572949 MUC1P15941 1255 aaPredicted RBP8.09□□□□□ -1.11
USP6-204ENST00000572949 HSPE1P61604 102 aaKnown RBP8.09□□□□□ -1.11
USP6-204ENST00000572949 CADM3Q8N126 398 aa8.09□□□□□ -1.11
USP6-204ENST00000572949 OR10AG1Q8NH19 301 aa8.09□□□□□ -1.11
USP6-204ENST00000572949 ALG14Q96F25 216 aa8.09□□□□□ -1.11
USP6-204ENST00000572949 PRADC1Q9BSG0 188 aa8.09□□□□□ -1.11
USP6-204ENST00000572949 FBXL15Q9H469 300 aa8.09□□□□□ -1.11
USP6-204ENST00000572949 JPT1Q9UK76 154 aa8.09□□□□□ -1.11
USP6-204ENST00000572949 PLXNA1Q9UIW2 1896 aa8.09□□□□□ -1.11
USP6-204ENST00000572949 HKR1P10072 659 aa8.09□□□□□ -1.11
USP6-204ENST00000572949 FOXB2Q5VYV0 432 aa8.09□□□□□ -1.11
USP6-204ENST00000572949 C10orf111Q8N326 155 aa8.09□□□□□ -1.11
USP6-204ENST00000572949 CHCHD5Q9BSY4 110 aa8.09□□□□□ -1.11
USP6-204ENST00000572949 TMEM160Q9NX00 188 aa8.09□□□□□ -1.11
USP6-204ENST00000572949 TBL2Q9Y4P3 447 aaKnown RBP8.09□□□□□ -1.11
USP6-204ENST00000572949 RNF114Q9Y508 228 aa8.09□□□□□ -1.11
USP6-204ENST00000572949 FOXS1O43638 330 aa8.09□□□□□ -1.11
USP6-204ENST00000572949 GLMPQ8WWB7 406 aa8.09□□□□□ -1.11
USP6-204ENST00000572949 F11RQ9Y624 299 aaKnown RBP8.09□□□□□ -1.11
USP6-204ENST00000572949 S100A7L2Q5SY68 101 aa8.09□□□□□ -1.11
USP6-204ENST00000572949 WDR82Q6UXN9 313 aa8.09□□□□□ -1.11
USP6-204ENST00000572949 ABHD1Q96SE0 405 aa8.09□□□□□ -1.11
USP6-204ENST00000572949 MED12Q93074 2177 aa8.09□□□□□ -1.11
USP6-204ENST00000572949 ZGRF1Q86YA3 2104 aa8.09□□□□□ -1.11
USP6-204ENST00000572949 NDUFB4O95168 129 aa8.09□□□□□ -1.12
USP6-204ENST00000572949 KLK2P20151 261 aa8.09□□□□□ -1.12
USP6-204ENST00000572949 FGF9P31371 208 aaPredicted RBP8.09□□□□□ -1.12
USP6-204ENST00000572949 LINC00305Q7Z4B0 112 aa8.09□□□□□ -1.12
USP6-204ENST00000572949 SPACA3Q8IXA5 215 aa8.09□□□□□ -1.12
USP6-204ENST00000572949 C10orf126Q8N4M7 172 aa8.09□□□□□ -1.12
USP6-204ENST00000572949 NRTNQ99748 197 aa8.09□□□□□ -1.12
USP6-204ENST00000572949 NEU3Q9UQ49 428 aa8.09□□□□□ -1.12
USP6-204ENST00000572949 A0A1B0GTL3 188 aa8.08□□□□□ -1.12
USP6-204ENST00000572949 ZNRF1Q8ND25 227 aa8.08□□□□□ -1.12
USP6-204ENST00000572949 MARCH11A6NNE9 402 aa8.08□□□□□ -1.12
USP6-204ENST00000572949 SMIM18P0DKX4 95 aa8.08□□□□□ -1.12
USP6-204ENST00000572949 LEPP41159 167 aa8.08□□□□□ -1.12
USP6-204ENST00000572949 NPBWR2P48146 333 aa8.08□□□□□ -1.12
USP6-204ENST00000572949 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.08□□□□□ -1.12
USP6-204ENST00000572949 FAM181AQ8N9Y4 354 aa8.08□□□□□ -1.12
USP6-204ENST00000572949 SPAG8Q99932 426 aaPredicted RBP8.08□□□□□ -1.12
USP6-204ENST00000572949 CYB5R1Q9UHQ9 305 aa8.08□□□□□ -1.12
USP6-204ENST00000572949 FOCADQ5VW36 1801 aa8.08□□□□□ -1.12
USP6-204ENST00000572949 MOSP00540 346 aa8.08□□□□□ -1.12
USP6-204ENST00000572949 C8orf88P0DMB2 117 aa8.08□□□□□ -1.12
USP6-204ENST00000572949 IL11P20809 199 aa8.08□□□□□ -1.12
USP6-204ENST00000572949 OR11H4Q8NGC9 324 aa8.08□□□□□ -1.12
USP6-204ENST00000572949 MZB1Q8WU39 189 aa8.08□□□□□ -1.12
USP6-204ENST00000572949 LTBP4Q8N2S1 1624 aa8.08□□□□□ -1.12
USP6-204ENST00000572949 NPIPB8E9PQR5 432 aa8.08□□□□□ -1.12
USP6-204ENST00000572949 NPIPB9F8W1W9 429 aa8.08□□□□□ -1.12
USP6-204ENST00000572949 NPIPB7O75200 414 aa8.08□□□□□ -1.12
USP6-204ENST00000572949 ZP3P21754 424 aa8.08□□□□□ -1.12
USP6-204ENST00000572949 RPL32P62910 135 aaKnown RBP8.08□□□□□ -1.12
USP6-204ENST00000572949 SERF2P84101 59 aa8.08□□□□□ -1.12
USP6-204ENST00000572949 ZP4Q12836 540 aa8.08□□□□□ -1.12
USP6-204ENST00000572949 ZNF146Q15072 292 aa8.08□□□□□ -1.12
USP6-204ENST00000572949 MIC13Q5XKP0 118 aa8.08□□□□□ -1.12
USP6-204ENST00000572949 PKIBQ9C010 78 aa8.08□□□□□ -1.12
USP6-204ENST00000572949 TRAV40A0A0B4J280 105 aa8.08□□□□□ -1.12
USP6-204ENST00000572949 ZIC3O60481 467 aa8.08□□□□□ -1.12
USP6-204ENST00000572949 LEPROTL1O95214 131 aa8.08□□□□□ -1.12
USP6-204ENST00000572949 ICAM4Q14773 271 aa8.08□□□□□ -1.12
USP6-204ENST00000572949 UNQ6494/PRO21346Q6UXR6 183 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms