RNA–Protein interactions for RNA: ENST00000572270.1

CCDC40-208, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 460 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-208ENST00000572270 IGHV3OR16-8A0A075B7F1 116 aa9.34□□□□□ -0.91
CCDC40-208ENST00000572270 TRBV6-6A0A0A6YYG2 114 aa9.34□□□□□ -0.91
CCDC40-208ENST00000572270 F8W735 103 aaPredicted RBP9.34□□□□□ -0.91
CCDC40-208ENST00000572270 K7EMT4 169 aa9.34□□□□□ -0.91
CCDC40-208ENST00000572270 NDUFA4O00483 81 aa9.34□□□□□ -0.91
CCDC40-208ENST00000572270 IL6RP08887 468 aaPredicted RBP9.34□□□□□ -0.91
CCDC40-208ENST00000572270 FAM3BP58499 235 aaPredicted RBP9.34□□□□□ -0.91
CCDC40-208ENST00000572270 KLK9Q2XQG4 91 aa9.34□□□□□ -0.91
CCDC40-208ENST00000572270 CCDC58Q4VC31 144 aa9.34□□□□□ -0.91
CCDC40-208ENST00000572270 LEMD1Q68G75 181 aa9.34□□□□□ -0.91
CCDC40-208ENST00000572270 GBGT1Q8N5D6 347 aa9.34□□□□□ -0.91
CCDC40-208ENST00000572270 TMEM14BQ9NUH8 114 aa9.34□□□□□ -0.91
CCDC40-208ENST00000572270 THYN1Q9P016 225 aa9.34□□□□□ -0.91
CCDC40-208ENST00000572270 KLK9Q9UKQ9 250 aa9.34□□□□□ -0.91
CCDC40-208ENST00000572270 TMED3Q9Y3Q3 217 aa9.34□□□□□ -0.91
CCDC40-208ENST00000572270 RBM7Q9Y580 266 aaKnown RBP9.34□□□□□ -0.91
CCDC40-208ENST00000572270 A0A1B0GW64 132 aa9.33□□□□□ -0.92
CCDC40-208ENST00000572270 OR2T8A6NH00 312 aa9.33□□□□□ -0.92
CCDC40-208ENST00000572270 REG1AP05451 166 aa9.33□□□□□ -0.92
CCDC40-208ENST00000572270 ZNF735P0CB33 412 aa9.33□□□□□ -0.92
CCDC40-208ENST00000572270 SPP1P10451 314 aa9.33□□□□□ -0.92
CCDC40-208ENST00000572270 SERPINB10P48595 397 aa9.33□□□□□ -0.92
CCDC40-208ENST00000572270 FLOT2Q14254 428 aa9.33□□□□□ -0.92
CCDC40-208ENST00000572270 IRF3Q14653 427 aa9.33□□□□□ -0.92
CCDC40-208ENST00000572270 OR2G6Q5TZ20 316 aa9.33□□□□□ -0.92
CCDC40-208ENST00000572270 MORN3Q6PF18 240 aaPredicted RBP9.33□□□□□ -0.92
CCDC40-208ENST00000572270 OR6M1Q8NGM8 313 aa9.33□□□□□ -0.92
CCDC40-208ENST00000572270 VSTM2AQ8TAG5 236 aa9.33□□□□□ -0.92
CCDC40-208ENST00000572270 BSCL2Q96G97 398 aaPredicted RBP9.33□□□□□ -0.92
CCDC40-208ENST00000572270 C5orf30Q96GV9 206 aa9.33□□□□□ -0.92
CCDC40-208ENST00000572270 HDHD3Q9BSH5 251 aaPredicted RBP9.33□□□□□ -0.92
CCDC40-208ENST00000572270 TMEM59Q9BXS4 323 aa9.33□□□□□ -0.92
CCDC40-208ENST00000572270 OR51E2Q9H255 320 aa9.33□□□□□ -0.92
CCDC40-208ENST00000572270 AASSQ9UDR5 926 aa9.33□□□□□ -0.92
CCDC40-208ENST00000572270 SMPXQ9UHP9 88 aa9.33□□□□□ -0.92
CCDC40-208ENST00000572270 NBDYA0A0U1RRE5 68 aa9.32□□□□□ -0.92
CCDC40-208ENST00000572270 C15orf62A8K5M9 175 aa9.32□□□□□ -0.92
CCDC40-208ENST00000572270 DFFBO76075 338 aa9.32□□□□□ -0.92
CCDC40-208ENST00000572270 SRMP19623 302 aa9.32□□□□□ -0.92
CCDC40-208ENST00000572270 PTBP1P26599 531 aaKnown RBP eCLIP9.32□□□□□ -0.92
CCDC40-208ENST00000572270 DUTP33316 252 aaKnown RBP9.32□□□□□ -0.92
CCDC40-208ENST00000572270 MAS1LP35410 378 aa9.32□□□□□ -0.92
CCDC40-208ENST00000572270 DEFB131AP59861 70 aa9.32□□□□□ -0.92
CCDC40-208ENST00000572270 RPS27AP62979 156 aaKnown RBP9.32□□□□□ -0.92
CCDC40-208ENST00000572270 PLA2G7Q13093 441 aa9.32□□□□□ -0.92
CCDC40-208ENST00000572270 Q499Y3 187 aa9.32□□□□□ -0.92
CCDC40-208ENST00000572270 XAF1Q6GPH4 301 aa9.32□□□□□ -0.92
CCDC40-208ENST00000572270 LYPD1Q8N2G4 141 aa9.32□□□□□ -0.92
CCDC40-208ENST00000572270 NKAIN3Q8N8D7 197 aa9.32□□□□□ -0.92
CCDC40-208ENST00000572270 UQCC2Q9BRT2 126 aa9.32□□□□□ -0.92
CCDC40-208ENST00000572270 ATG101Q9BSB4 218 aa9.32□□□□□ -0.92
CCDC40-208ENST00000572270 RHPN1-AS1Q9BWJ2 59 aa9.32□□□□□ -0.92
CCDC40-208ENST00000572270 Q9N2K0 584 aa9.32□□□□□ -0.92
CCDC40-208ENST00000572270 AK3Q9UIJ7 227 aa9.32□□□□□ -0.92
CCDC40-208ENST00000572270 FLG2Q5D862 2391 aaPredicted RBP9.31□□□□□ -0.92
CCDC40-208ENST00000572270 IGKV1-6A0A0C4DH72 117 aa9.31□□□□□ -0.92
CCDC40-208ENST00000572270 TRBV5-5A0A0J9YX44 114 aa9.31□□□□□ -0.92
CCDC40-208ENST00000572270 TCRBV3S1A0A5B6 114 aa9.31□□□□□ -0.92
CCDC40-208ENST00000572270 E7EUB6 86 aa9.31□□□□□ -0.92
CCDC40-208ENST00000572270 CHEK1O14757 476 aa9.31□□□□□ -0.92
CCDC40-208ENST00000572270 FCGR3BO75015 233 aa9.31□□□□□ -0.92
CCDC40-208ENST00000572270 KBTBD11O94819 623 aa9.31□□□□□ -0.92
CCDC40-208ENST00000572270 GIG44P09565 113 aaPredicted RBP9.31□□□□□ -0.92
CCDC40-208ENST00000572270 UBBP0CG47 229 aa9.31□□□□□ -0.92
CCDC40-208ENST00000572270 HTR2CP28335 458 aa9.31□□□□□ -0.92
CCDC40-208ENST00000572270 ARFRP1Q13795 201 aa9.31□□□□□ -0.92
CCDC40-208ENST00000572270 SPSB3Q6PJ21 355 aa9.31□□□□□ -0.92
CCDC40-208ENST00000572270 TMEM116Q8NCL8 245 aa9.31□□□□□ -0.92
CCDC40-208ENST00000572270 GGHQ92820 318 aa9.31□□□□□ -0.92
CCDC40-208ENST00000572270 SMIM19Q96E16 107 aa9.31□□□□□ -0.92
CCDC40-208ENST00000572270 C12orf4Q9NQ89 552 aa9.31□□□□□ -0.92
CCDC40-208ENST00000572270 FAT1Q14517 4588 aa9.31□□□□□ -0.92
CCDC40-208ENST00000572270 VPS13BQ7Z7G8 4022 aa9.3□□□□□ -0.92
CCDC40-208ENST00000572270 IGHV7-4-1A0A0J9YVY3 117 aa9.3□□□□□ -0.92
CCDC40-208ENST00000572270 A0A1W2PPK0 400 aa9.3□□□□□ -0.92
CCDC40-208ENST00000572270 LINC00473A8K010 186 aa9.3□□□□□ -0.92
CCDC40-208ENST00000572270 DNASE2O00115 360 aaPredicted RBP9.3□□□□□ -0.92
CCDC40-208ENST00000572270 BET1O15155 118 aa9.3□□□□□ -0.92
CCDC40-208ENST00000572270 CYB5BO43169 146 aa9.3□□□□□ -0.92
CCDC40-208ENST00000572270 C4BPBP20851 252 aa9.3□□□□□ -0.92
CCDC40-208ENST00000572270 KRTAP10-2P60368 255 aa9.3□□□□□ -0.92
CCDC40-208ENST00000572270 OR10K2Q6IF99 312 aa9.3□□□□□ -0.92
CCDC40-208ENST00000572270 VKORC1L1Q8N0U8 176 aa9.3□□□□□ -0.92
CCDC40-208ENST00000572270 OR4A4PQ8NGN8 299 aa9.3□□□□□ -0.92
CCDC40-208ENST00000572270 OR10J5Q8NHC4 309 aa9.3□□□□□ -0.92
CCDC40-208ENST00000572270 GIMAP1Q8WWP7 306 aa9.3□□□□□ -0.92
CCDC40-208ENST00000572270 YTHDF1Q9BYJ9 559 aaKnown RBP9.3□□□□□ -0.92
CCDC40-208ENST00000572270 ARGLU1Q9NWB6 273 aaPredicted RBP9.3□□□□□ -0.92
CCDC40-208ENST00000572270 CLEC5AQ9NY25 188 aa9.3□□□□□ -0.92
CCDC40-208ENST00000572270 PTTG2Q9NZH5 202 aa9.3□□□□□ -0.92
CCDC40-208ENST00000572270 MRPS7Q9Y2R9 242 aaKnown RBP9.3□□□□□ -0.92
CCDC40-208ENST00000572270 TRDCB7Z8K6 153 aa9.29□□□□□ -0.92
CCDC40-208ENST00000572270 SPART-AS1P0CW21 52 aa9.29□□□□□ -0.92
CCDC40-208ENST00000572270 CRHBPP24387 322 aa9.29□□□□□ -0.92
CCDC40-208ENST00000572270 ATP6AP1Q15904 470 aa9.29□□□□□ -0.92
CCDC40-208ENST00000572270 YIF1BQ5BJH7 314 aa9.29□□□□□ -0.92
CCDC40-208ENST00000572270 ZNF66Q6ZN08 573 aa9.29□□□□□ -0.92
CCDC40-208ENST00000572270 TRPT1Q86TN4 253 aaKnown RBP9.29□□□□□ -0.92
CCDC40-208ENST00000572270 SYT8Q8NBV8 401 aa9.29□□□□□ -0.92
CCDC40-208ENST00000572270 TMEM167AQ8TBQ9 72 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms