RNA–Protein interactions for RNA: ENST00000572174.5

RPAIN-211, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-211ENST00000572174 DGCR2P98153 550 aa10.9□□□□□ -0.66
RPAIN-211ENST00000572174 RUNX1Q01196 453 aa10.9□□□□□ -0.66
RPAIN-211ENST00000572174 POU2AF1Q16633 256 aa10.9□□□□□ -0.66
RPAIN-211ENST00000572174 FAM209BQ5JX69 171 aa10.9□□□□□ -0.66
RPAIN-211ENST00000572174 SPANXN2Q5MJ10 180 aa10.9□□□□□ -0.66
RPAIN-211ENST00000572174 THOC7Q6I9Y2 204 aaKnown RBP10.9□□□□□ -0.66
RPAIN-211ENST00000572174 C8orf86Q6ZUL3 223 aa10.9□□□□□ -0.66
RPAIN-211ENST00000572174 PUSL1Q8N0Z8 303 aaKnown RBP10.9□□□□□ -0.66
RPAIN-211ENST00000572174 CADM3Q8N126 398 aa10.9□□□□□ -0.66
RPAIN-211ENST00000572174 CCDC71LQ8N9Z2 235 aa10.9□□□□□ -0.66
RPAIN-211ENST00000572174 TMEM167AQ8TBQ9 72 aa10.9□□□□□ -0.66
RPAIN-211ENST00000572174 SRSF12Q8WXF0 261 aaKnown RBP10.9□□□□□ -0.66
RPAIN-211ENST00000572174 DEDD2Q8WXF8 326 aa10.9□□□□□ -0.66
RPAIN-211ENST00000572174 DPF1Q92782 380 aa10.9□□□□□ -0.66
RPAIN-211ENST00000572174 DGCR14Q96DF8 476 aaKnown RBP10.9□□□□□ -0.66
RPAIN-211ENST00000572174 PRRT1Q99946 306 aa10.9□□□□□ -0.66
RPAIN-211ENST00000572174 FAM103A1Q9BTL3 118 aaKnown RBP10.9□□□□□ -0.66
RPAIN-211ENST00000572174 RSRP1Q9BUV0 290 aa10.9□□□□□ -0.66
RPAIN-211ENST00000572174 ZNF430Q9H8G1 570 aaPredicted RBP10.9□□□□□ -0.66
RPAIN-211ENST00000572174 HRASLSQ9HDD0 168 aa10.9□□□□□ -0.66
RPAIN-211ENST00000572174 ZMAT5Q9UDW3 170 aaKnown RBP10.9□□□□□ -0.66
RPAIN-211ENST00000572174 FBXO7Q9Y3I1 522 aa10.9□□□□□ -0.66
RPAIN-211ENST00000572174 M0QYG6 137 aa10.89□□□□□ -0.67
RPAIN-211ENST00000572174 CCL24O00175 119 aa10.89□□□□□ -0.67
RPAIN-211ENST00000572174 ATG12O94817 140 aa10.89□□□□□ -0.67
RPAIN-211ENST00000572174 BRI3O95415 125 aa10.89□□□□□ -0.67
RPAIN-211ENST00000572174 DHFRP00374 187 aa10.89□□□□□ -0.67
RPAIN-211ENST00000572174 OR8U8P0C7N1 319 aa10.89□□□□□ -0.67
RPAIN-211ENST00000572174 EGR2P11161 476 aaPredicted RBP10.89□□□□□ -0.67
RPAIN-211ENST00000572174 RPA2P15927 270 aa10.89□□□□□ -0.67
RPAIN-211ENST00000572174 TNFSF8P32971 234 aa10.89□□□□□ -0.67
RPAIN-211ENST00000572174 TPPP2P59282 170 aa10.89□□□□□ -0.67
RPAIN-211ENST00000572174 RND3P61587 244 aa10.89□□□□□ -0.67
RPAIN-211ENST00000572174 SURF2Q15527 256 aaPredicted RBP10.89□□□□□ -0.67
RPAIN-211ENST00000572174 IDO2Q6ZQW0 420 aa10.89□□□□□ -0.67
RPAIN-211ENST00000572174 ZNF491Q8N8L2 437 aa10.89□□□□□ -0.67
RPAIN-211ENST00000572174 WFDC9Q8NEX5 89 aa10.89□□□□□ -0.67
RPAIN-211ENST00000572174 TERB2Q8NHR7 220 aa10.89□□□□□ -0.67
RPAIN-211ENST00000572174 TINAGL1Q9GZM7 467 aaPredicted RBP10.89□□□□□ -0.67
RPAIN-211ENST00000572174 ZNF355PQ9NSJ1 428 aa10.89□□□□□ -0.67
RPAIN-211ENST00000572174 TRRAPQ9Y4A5 3859 aa10.89□□□□□ -0.67
RPAIN-211ENST00000572174 C13orf42A0A1B0GVH6 325 aa10.88□□□□□ -0.67
RPAIN-211ENST00000572174 DPPA5A6NC42 116 aa10.88□□□□□ -0.67
RPAIN-211ENST00000572174 MARCH11A6NNE9 402 aa10.88□□□□□ -0.67
RPAIN-211ENST00000572174 RAMP3O60896 148 aa10.88□□□□□ -0.67
RPAIN-211ENST00000572174 TRGV3P03979 118 aa10.88□□□□□ -0.67
RPAIN-211ENST00000572174 OR9G9P0C7N8 305 aa10.88□□□□□ -0.67
RPAIN-211ENST00000572174 PJVKQ0ZLH3 352 aa10.88□□□□□ -0.67
RPAIN-211ENST00000572174 HIST2H2BDQ6DRA6 164 aa10.88□□□□□ -0.67
RPAIN-211ENST00000572174 HSD17B13Q7Z5P4 300 aaPredicted RBP10.88□□□□□ -0.67
RPAIN-211ENST00000572174 LHFPL1Q86WI0 220 aa10.88□□□□□ -0.67
RPAIN-211ENST00000572174 SCGB3A2Q96PL1 93 aa10.88□□□□□ -0.67
RPAIN-211ENST00000572174 TSC22D3Q99576 134 aa10.88□□□□□ -0.67
RPAIN-211ENST00000572174 SRSF8Q9BRL6 282 aaKnown RBP10.88□□□□□ -0.67
RPAIN-211ENST00000572174 COMMD5Q9GZQ3 224 aa10.88□□□□□ -0.67
RPAIN-211ENST00000572174 SLC2A9Q9NRM0 540 aa10.88□□□□□ -0.67
RPAIN-211ENST00000572174 SCP2D1Q9UJQ7 156 aa10.88□□□□□ -0.67
RPAIN-211ENST00000572174 MSGN1A6NI15 193 aa10.87□□□□□ -0.67
RPAIN-211ENST00000572174 CYB5BO43169 146 aa10.87□□□□□ -0.67
RPAIN-211ENST00000572174 LGALS1P09382 135 aaKnown RBP10.87□□□□□ -0.67
RPAIN-211ENST00000572174 HLA-GP17693 338 aa10.87□□□□□ -0.67
RPAIN-211ENST00000572174 RPL27AP46776 148 aaKnown RBP10.87□□□□□ -0.67
RPAIN-211ENST00000572174 SCGB2B2Q4G0G5 96 aa10.87□□□□□ -0.67
RPAIN-211ENST00000572174 PHLDA2Q53GA4 152 aa10.87□□□□□ -0.67
RPAIN-211ENST00000572174 OR4A47Q6IF82 309 aa10.87□□□□□ -0.67
RPAIN-211ENST00000572174 LCNL1Q6ZST4 164 aa10.87□□□□□ -0.67
RPAIN-211ENST00000572174 SSX9Q7RTT3 188 aa10.87□□□□□ -0.67
RPAIN-211ENST00000572174 REC114Q7Z4M0 266 aa10.87□□□□□ -0.67
RPAIN-211ENST00000572174 MRPL41Q8IXM3 137 aaKnown RBP10.87□□□□□ -0.67
RPAIN-211ENST00000572174 LINC00482Q8N8I6 264 aa10.87□□□□□ -0.67
RPAIN-211ENST00000572174 USMG5Q96IX5 58 aa10.87□□□□□ -0.67
RPAIN-211ENST00000572174 P2RX4Q99571 388 aa10.87□□□□□ -0.67
RPAIN-211ENST00000572174 COA4Q9NYJ1 87 aa10.87□□□□□ -0.67
RPAIN-211ENST00000572174 COPZ2Q9P299 210 aa10.87□□□□□ -0.67
RPAIN-211ENST00000572174 C14orf166Q9Y224 244 aaKnown RBP10.87□□□□□ -0.67
RPAIN-211ENST00000572174 ZNF257Q9Y2Q1 563 aa10.87□□□□□ -0.67
RPAIN-211ENST00000572174 ANKRD20A5PA0PJZ0 165 aa10.86□□□□□ -0.67
RPAIN-211ENST00000572174 FAM223BA6NKX1 122 aa10.86□□□□□ -0.67
RPAIN-211ENST00000572174 SNAPC5O75971 98 aa10.86□□□□□ -0.67
RPAIN-211ENST00000572174 S1PR2O95136 353 aa10.86□□□□□ -0.67
RPAIN-211ENST00000572174 SERPINE2P07093 398 aa10.86□□□□□ -0.67
RPAIN-211ENST00000572174 PPP5CP53041 499 aa10.86□□□□□ -0.67
RPAIN-211ENST00000572174 PIGPP57054 158 aa10.86□□□□□ -0.67
RPAIN-211ENST00000572174 BRWD1-AS2P59051 145 aa10.86□□□□□ -0.67
RPAIN-211ENST00000572174 SSBP2P81877 361 aaPredicted RBP10.86□□□□□ -0.67
RPAIN-211ENST00000572174 ZNF616Q08AN1 781 aa10.86□□□□□ -0.67
RPAIN-211ENST00000572174 PYDC2Q56P42 97 aa10.86□□□□□ -0.67
RPAIN-211ENST00000572174 SAMD5Q5TGI4 173 aa10.86□□□□□ -0.67
RPAIN-211ENST00000572174 ETV3LQ6ZN32 361 aa10.86□□□□□ -0.67
RPAIN-211ENST00000572174 TBC1D26Q86UD7 250 aa10.86□□□□□ -0.67
RPAIN-211ENST00000572174 FAM223AQ8IWN6 122 aa10.86□□□□□ -0.67
RPAIN-211ENST00000572174 VKORC1L1Q8N0U8 176 aa10.86□□□□□ -0.67
RPAIN-211ENST00000572174 GPHA2Q96T91 129 aa10.86□□□□□ -0.67
RPAIN-211ENST00000572174 KLK15Q9H2R5 256 aa10.86□□□□□ -0.67
RPAIN-211ENST00000572174 TMEM140Q9NV12 185 aa10.86□□□□□ -0.67
RPAIN-211ENST00000572174 FKBP11Q9NYL4 201 aa10.86□□□□□ -0.67
RPAIN-211ENST00000572174 PIGBOS1A0A0B4J2F0 54 aa10.85□□□□□ -0.67
RPAIN-211ENST00000572174 NPIPB5A8MRT5 1133 aa10.85□□□□□ -0.67
RPAIN-211ENST00000572174 H0Y980 276 aa10.85□□□□□ -0.67
RPAIN-211ENST00000572174 I3L521 148 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms