RNA–Protein interactions for RNA: ENST00000569336.2

CLN6-209, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-209ENST00000569336 TMEM167AQ8TBQ9 72 aa7.65□□□□□ -1.18
CLN6-209ENST00000569336 SMIM4Q8WVI0 70 aa7.65□□□□□ -1.18
CLN6-209ENST00000569336 SRSF12Q8WXF0 261 aaKnown RBP7.65□□□□□ -1.18
CLN6-209ENST00000569336 RAX2Q96IS3 184 aa7.65□□□□□ -1.18
CLN6-209ENST00000569336 OR2A7Q96R45 310 aa7.65□□□□□ -1.18
CLN6-209ENST00000569336 P2RX4Q99571 388 aa7.65□□□□□ -1.18
CLN6-209ENST00000569336 SLIRPQ9GZT3 109 aaKnown RBP7.65□□□□□ -1.18
CLN6-209ENST00000569336 MIXL1Q9H2W2 232 aa7.65□□□□□ -1.18
CLN6-209ENST00000569336 PLEKHA2Q9HB19 425 aa7.65□□□□□ -1.18
CLN6-209ENST00000569336 COA4Q9NYJ1 87 aa7.65□□□□□ -1.18
CLN6-209ENST00000569336 CTDSP2O14595 271 aa7.64□□□□□ -1.19
CLN6-209ENST00000569336 SOX15O60248 233 aa7.64□□□□□ -1.19
CLN6-209ENST00000569336 BRI3O95415 125 aa7.64□□□□□ -1.19
CLN6-209ENST00000569336 TRGV3P03979 118 aa7.64□□□□□ -1.19
CLN6-209ENST00000569336 LGALS1P09382 135 aaKnown RBP7.64□□□□□ -1.19
CLN6-209ENST00000569336 OR9G9P0C7N8 305 aa7.64□□□□□ -1.19
CLN6-209ENST00000569336 IGLL1P15814 213 aa7.64□□□□□ -1.19
CLN6-209ENST00000569336 F2RP25116 425 aa7.64□□□□□ -1.19
CLN6-209ENST00000569336 UCP3P55916 312 aa7.64□□□□□ -1.19
CLN6-209ENST00000569336 ZNF616Q08AN1 781 aa7.64□□□□□ -1.19
CLN6-209ENST00000569336 FHL3Q13643 280 aa7.64□□□□□ -1.19
CLN6-209ENST00000569336 MEF2DQ14814 521 aa7.64□□□□□ -1.19
CLN6-209ENST00000569336 C18orf65Q6ZTR6 163 aa7.64□□□□□ -1.19
CLN6-209ENST00000569336 PUSL1Q8N0Z8 303 aaKnown RBP7.64□□□□□ -1.19
CLN6-209ENST00000569336 TMEM229BQ8NBD8 167 aa7.64□□□□□ -1.19
CLN6-209ENST00000569336 DMBX1Q8NFW5 382 aa7.64□□□□□ -1.19
CLN6-209ENST00000569336 ZNF486Q96H40 463 aaPredicted RBP7.64□□□□□ -1.19
CLN6-209ENST00000569336 GPHA2Q96T91 129 aa7.64□□□□□ -1.19
CLN6-209ENST00000569336 KLK15Q9H2R5 256 aa7.64□□□□□ -1.19
CLN6-209ENST00000569336 HRASLSQ9HDD0 168 aa7.64□□□□□ -1.19
CLN6-209ENST00000569336 ZNF355PQ9NSJ1 428 aa7.64□□□□□ -1.19
CLN6-209ENST00000569336 FAM212BQ9NTI7 297 aaPredicted RBP7.64□□□□□ -1.19
CLN6-209ENST00000569336 BET1LQ9NYM9 111 aa7.64□□□□□ -1.19
CLN6-209ENST00000569336 KLK11Q9UBX7 282 aa7.64□□□□□ -1.19
CLN6-209ENST00000569336 ZMAT5Q9UDW3 170 aaKnown RBP7.64□□□□□ -1.19
CLN6-209ENST00000569336 RSL24D1Q9UHA3 163 aaKnown RBP7.64□□□□□ -1.19
CLN6-209ENST00000569336 CEPT1Q9Y6K0 416 aa7.64□□□□□ -1.19
CLN6-209ENST00000569336 C13orf42A0A1B0GVH6 325 aa7.63□□□□□ -1.19
CLN6-209ENST00000569336 DPPA5A6NC42 116 aa7.63□□□□□ -1.19
CLN6-209ENST00000569336 MARCH11A6NNE9 402 aa7.63□□□□□ -1.19
CLN6-209ENST00000569336 I3L521 148 aa7.63□□□□□ -1.19
CLN6-209ENST00000569336 M0QYG6 137 aa7.63□□□□□ -1.19
CLN6-209ENST00000569336 CTDSPLO15194 276 aa7.63□□□□□ -1.19
CLN6-209ENST00000569336 RAMP3O60896 148 aa7.63□□□□□ -1.19
CLN6-209ENST00000569336 PGLYRP1O75594 196 aaPredicted RBP7.63□□□□□ -1.19
CLN6-209ENST00000569336 DHFRP00374 187 aa7.63□□□□□ -1.19
CLN6-209ENST00000569336 CD3DP04234 171 aa7.63□□□□□ -1.19
CLN6-209ENST00000569336 S100A5P33763 92 aa7.63□□□□□ -1.19
CLN6-209ENST00000569336 ECI1P42126 302 aa7.63□□□□□ -1.19
CLN6-209ENST00000569336 RPL27AP46776 148 aaKnown RBP7.63□□□□□ -1.19
CLN6-209ENST00000569336 RPL8P62917 257 aaKnown RBP7.63□□□□□ -1.19
CLN6-209ENST00000569336 DGCR2P98153 550 aa7.63□□□□□ -1.19
CLN6-209ENST00000569336 POU2AF1Q16633 256 aa7.63□□□□□ -1.19
CLN6-209ENST00000569336 OXLD1Q5BKU9 147 aa7.63□□□□□ -1.19
CLN6-209ENST00000569336 OR4A47Q6IF82 309 aa7.63□□□□□ -1.19
CLN6-209ENST00000569336 VKORC1L1Q8N0U8 176 aa7.63□□□□□ -1.19
CLN6-209ENST00000569336 OR11H1Q8NG94 326 aa7.63□□□□□ -1.19
CLN6-209ENST00000569336 DGCR14Q96DF8 476 aaKnown RBP7.63□□□□□ -1.19
CLN6-209ENST00000569336 ABHD1Q96SE0 405 aa7.63□□□□□ -1.19
CLN6-209ENST00000569336 RSRP1Q9BUV0 290 aa7.63□□□□□ -1.19
CLN6-209ENST00000569336 GNB4Q9HAV0 340 aa7.63□□□□□ -1.19
CLN6-209ENST00000569336 MSGN1A6NI15 193 aa7.62□□□□□ -1.19
CLN6-209ENST00000569336 FAM223BA6NKX1 122 aa7.62□□□□□ -1.19
CLN6-209ENST00000569336 S1PR2O95136 353 aa7.62□□□□□ -1.19
CLN6-209ENST00000569336 RAB3DO95716 219 aa7.62□□□□□ -1.19
CLN6-209ENST00000569336 CD74P04233 296 aa7.62□□□□□ -1.19
CLN6-209ENST00000569336 PGAM2P15259 253 aa7.62□□□□□ -1.19
CLN6-209ENST00000569336 HLA-GP17693 338 aa7.62□□□□□ -1.19
CLN6-209ENST00000569336 BRWD1-AS2P59051 145 aa7.62□□□□□ -1.19
CLN6-209ENST00000569336 MRGPRG-AS1Q2M3A8 158 aa7.62□□□□□ -1.19
CLN6-209ENST00000569336 PHLDA2Q53GA4 152 aa7.62□□□□□ -1.19
CLN6-209ENST00000569336 FAM209BQ5JX69 171 aa7.62□□□□□ -1.19
CLN6-209ENST00000569336 THOC7Q6I9Y2 204 aaKnown RBP7.62□□□□□ -1.19
CLN6-209ENST00000569336 STEAP1BQ6NZ63 245 aa7.62□□□□□ -1.19
CLN6-209ENST00000569336 SSX9Q7RTT3 188 aa7.62□□□□□ -1.19
CLN6-209ENST00000569336 FAM223AQ8IWN6 122 aa7.62□□□□□ -1.19
CLN6-209ENST00000569336 CCDC71LQ8N9Z2 235 aa7.62□□□□□ -1.19
CLN6-209ENST00000569336 ADAD2Q8NCV1 583 aaKnown RBP7.62□□□□□ -1.19
CLN6-209ENST00000569336 OR5T1Q8NG75 326 aa7.62□□□□□ -1.19
CLN6-209ENST00000569336 OR1N2Q8NGR9 330 aa7.62□□□□□ -1.19
CLN6-209ENST00000569336 CASTOR1Q8WTX7 329 aa7.62□□□□□ -1.19
CLN6-209ENST00000569336 USMG5Q96IX5 58 aa7.62□□□□□ -1.19
CLN6-209ENST00000569336 MS4A10Q96PG2 267 aa7.62□□□□□ -1.19
CLN6-209ENST00000569336 DUX3Q96PT4 197 aa7.62□□□□□ -1.19
CLN6-209ENST00000569336 OR5B12Q96R08 314 aa7.62□□□□□ -1.19
CLN6-209ENST00000569336 TINAGL1Q9GZM7 467 aaPredicted RBP7.62□□□□□ -1.19
CLN6-209ENST00000569336 COMMD5Q9GZQ3 224 aa7.62□□□□□ -1.19
CLN6-209ENST00000569336 NXF2Q9GZY0 626 aaKnown RBP7.62□□□□□ -1.19
CLN6-209ENST00000569336 RBM38Q9H0Z9 239 aaKnown RBP7.62□□□□□ -1.19
CLN6-209ENST00000569336 SLC2A9Q9NRM0 540 aa7.62□□□□□ -1.19
CLN6-209ENST00000569336 TMEM140Q9NV12 185 aa7.62□□□□□ -1.19
CLN6-209ENST00000569336 ZNF257Q9Y2Q1 563 aa7.62□□□□□ -1.19
CLN6-209ENST00000569336 FABP12A6NFH5 140 aa7.61□□□□□ -1.19
CLN6-209ENST00000569336 DISC1C4P0D8 188 aa7.61□□□□□ -1.19
CLN6-209ENST00000569336 LINC01619G3V211 115 aa7.61□□□□□ -1.19
CLN6-209ENST00000569336 CYB5BO43169 146 aa7.61□□□□□ -1.19
CLN6-209ENST00000569336 GSTZ1O43708 216 aaPredicted RBP7.61□□□□□ -1.19
CLN6-209ENST00000569336 ZNF735P0CB33 412 aa7.61□□□□□ -1.19
CLN6-209ENST00000569336 AKAIN1P0CW23 69 aa7.61□□□□□ -1.19
CLN6-209ENST00000569336 APELAP0DMC3 54 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms