RNA–Protein interactions for RNA: ENST00000569117.1

CDH3-210, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-210ENST00000569117 TSNAXQ99598 290 aaKnown RBP8.34□□□□□ -1.07
CDH3-210ENST00000569117 SEC22CQ9BRL7 303 aa8.34□□□□□ -1.07
CDH3-210ENST00000569117 GPN1Q9HCN4 374 aaPredicted RBP8.34□□□□□ -1.07
CDH3-210ENST00000569117 VPREB3Q9UKI3 123 aa8.34□□□□□ -1.07
CDH3-210ENST00000569117 A0A0B4J2A0 478 aa8.33□□□□□ -1.08
CDH3-210ENST00000569117 DUXBA0A1W2PPF3 345 aa8.33□□□□□ -1.08
CDH3-210ENST00000569117 DNAJC9-AS1A6NH13 148 aa8.33□□□□□ -1.08
CDH3-210ENST00000569117 MARCH11A6NNE9 402 aa8.33□□□□□ -1.08
CDH3-210ENST00000569117 CREBL2O60519 120 aaPredicted RBP8.33□□□□□ -1.08
CDH3-210ENST00000569117 ATG12O94817 140 aa8.33□□□□□ -1.08
CDH3-210ENST00000569117 OR2F2O95006 317 aa8.33□□□□□ -1.08
CDH3-210ENST00000569117 NDUFA3O95167 84 aa8.33□□□□□ -1.08
CDH3-210ENST00000569117 HRASP01112 189 aa8.33□□□□□ -1.08
CDH3-210ENST00000569117 IGLV2-23P01705 113 aa8.33□□□□□ -1.08
CDH3-210ENST00000569117 NQO2P16083 231 aa8.33□□□□□ -1.08
CDH3-210ENST00000569117 LGALS7P47929 136 aa8.33□□□□□ -1.08
CDH3-210ENST00000569117 MMDQ15546 238 aa8.33□□□□□ -1.08
CDH3-210ENST00000569117 TMEM268Q5VZI3 342 aa8.33□□□□□ -1.08
CDH3-210ENST00000569117 CADM3Q8N126 398 aa8.33□□□□□ -1.08
CDH3-210ENST00000569117 LGI3Q8N145 548 aa8.33□□□□□ -1.08
CDH3-210ENST00000569117 OR2C3Q8N628 320 aa8.33□□□□□ -1.08
CDH3-210ENST00000569117 SLC35G3Q8N808 338 aa8.33□□□□□ -1.08
CDH3-210ENST00000569117 COQ8AQ8NI60 647 aa8.33□□□□□ -1.08
CDH3-210ENST00000569117 ZNF418Q8TF45 676 aaPredicted RBP8.33□□□□□ -1.08
CDH3-210ENST00000569117 R3HDM4Q96D70 268 aa8.33□□□□□ -1.08
CDH3-210ENST00000569117 RBM14Q96PK6 669 aaKnown RBP8.33□□□□□ -1.08
CDH3-210ENST00000569117 PHB2Q99623 299 aa8.33□□□□□ -1.08
CDH3-210ENST00000569117 TEP1Q99973 2627 aaKnown RBP8.33□□□□□ -1.08
CDH3-210ENST00000569117 AIFM2Q9BRQ8 373 aa8.33□□□□□ -1.08
CDH3-210ENST00000569117 SHPKQ9UHJ6 478 aa8.33□□□□□ -1.08
CDH3-210ENST00000569117 MOB4Q9Y3A3 225 aa8.33□□□□□ -1.08
CDH3-210ENST00000569117 A0A0A6YYJ9 748 aa8.32□□□□□ -1.08
CDH3-210ENST00000569117 DBX1A6NMT0 343 aa8.32□□□□□ -1.08
CDH3-210ENST00000569117 CLDN34H7C241 214 aa8.32□□□□□ -1.08
CDH3-210ENST00000569117 NBR2O15453 112 aa8.32□□□□□ -1.08
CDH3-210ENST00000569117 FGF16O43320 207 aa8.32□□□□□ -1.08
CDH3-210ENST00000569117 CHST1O43916 411 aa8.32□□□□□ -1.08
CDH3-210ENST00000569117 IGKV1-5P01602 117 aa8.32□□□□□ -1.08
CDH3-210ENST00000569117 P0C879 139 aa8.32□□□□□ -1.08
CDH3-210ENST00000569117 SAA1P0DJI8 122 aaPredicted RBP8.32□□□□□ -1.08
CDH3-210ENST00000569117 CNTFRP26992 372 aa8.32□□□□□ -1.08
CDH3-210ENST00000569117 AKR1C2P52895 323 aa8.32□□□□□ -1.08
CDH3-210ENST00000569117 HILS1P60008 231 aa8.32□□□□□ -1.08
CDH3-210ENST00000569117 UBE2KP61086 200 aa8.32□□□□□ -1.08
CDH3-210ENST00000569117 ERVK-16P61578 105 aa8.32□□□□□ -1.08
CDH3-210ENST00000569117 RPS16P62249 146 aaKnown RBP8.32□□□□□ -1.08
CDH3-210ENST00000569117 VMA21Q3ZAQ7 101 aa8.32□□□□□ -1.08
CDH3-210ENST00000569117 TMEM219Q86XT9 240 aa8.32□□□□□ -1.08
CDH3-210ENST00000569117 ZNF695Q8IW36 515 aa8.32□□□□□ -1.08
CDH3-210ENST00000569117 SELENOHQ8IZQ5 122 aaKnown RBP8.32□□□□□ -1.08
CDH3-210ENST00000569117 FAM71E2Q8N5Q1 922 aa8.32□□□□□ -1.08
CDH3-210ENST00000569117 NPBQ8NG41 125 aa8.32□□□□□ -1.08
CDH3-210ENST00000569117 VSTM2AQ8TAG5 236 aa8.32□□□□□ -1.08
CDH3-210ENST00000569117 SEC22AQ96IW7 307 aa8.32□□□□□ -1.08
CDH3-210ENST00000569117 RITA1Q96K30 269 aa8.32□□□□□ -1.08
CDH3-210ENST00000569117 SLC25A33Q9BSK2 321 aa8.32□□□□□ -1.08
CDH3-210ENST00000569117 PLSCR3Q9NRY6 295 aa8.32□□□□□ -1.08
CDH3-210ENST00000569117 TMEM140Q9NV12 185 aa8.32□□□□□ -1.08
CDH3-210ENST00000569117 KIAA1456Q9P272 454 aa8.32□□□□□ -1.08
CDH3-210ENST00000569117 ALG5Q9Y673 324 aa8.32□□□□□ -1.08
CDH3-210ENST00000569117 SRRM4A7MD48 611 aaKnown RBP8.31□□□□□ -1.08
CDH3-210ENST00000569117 M0QZK8 103 aa8.31□□□□□ -1.08
CDH3-210ENST00000569117 RRHO14718 337 aa8.31□□□□□ -1.08
CDH3-210ENST00000569117 SLC25A17O43808 307 aa8.31□□□□□ -1.08
CDH3-210ENST00000569117 KBTBD11O94819 623 aa8.31□□□□□ -1.08
CDH3-210ENST00000569117 KRASP01116 189 aa8.31□□□□□ -1.08
CDH3-210ENST00000569117 CRYGBP07316 175 aa8.31□□□□□ -1.08
CDH3-210ENST00000569117 FGF2P09038 288 aa8.31□□□□□ -1.08
CDH3-210ENST00000569117 VDAC1P21796 283 aa8.31□□□□□ -1.08
CDH3-210ENST00000569117 G6PCP35575 357 aa8.31□□□□□ -1.08
CDH3-210ENST00000569117 HNF4GQ14541 408 aa8.31□□□□□ -1.08
CDH3-210ENST00000569117 KIR3DS1Q14943 382 aa8.31□□□□□ -1.08
CDH3-210ENST00000569117 PSG5Q15238 335 aa8.31□□□□□ -1.08
CDH3-210ENST00000569117 LY6EQ16553 131 aa8.31□□□□□ -1.08
CDH3-210ENST00000569117 NMSQ5H8A3 153 aa8.31□□□□□ -1.08
CDH3-210ENST00000569117 OR4A47Q6IF82 309 aa8.31□□□□□ -1.08
CDH3-210ENST00000569117 FAM219AQ8IW50 185 aa8.31□□□□□ -1.08
CDH3-210ENST00000569117 VKORC1L1Q8N0U8 176 aa8.31□□□□□ -1.08
CDH3-210ENST00000569117 PUSL1Q8N0Z8 303 aaKnown RBP8.31□□□□□ -1.08
CDH3-210ENST00000569117 C12orf45Q8N5I9 185 aaPredicted RBP8.31□□□□□ -1.08
CDH3-210ENST00000569117 DMBX1Q8NFW5 382 aa8.31□□□□□ -1.08
CDH3-210ENST00000569117 LSM10Q969L4 123 aaKnown RBP8.31□□□□□ -1.08
CDH3-210ENST00000569117 CHIAQ9BZP6 476 aa8.31□□□□□ -1.08
CDH3-210ENST00000569117 RAB18Q9NP72 206 aa8.31□□□□□ -1.08
CDH3-210ENST00000569117 ESM1Q9NQ30 184 aa8.31□□□□□ -1.08
CDH3-210ENST00000569117 BET1LQ9NYM9 111 aa8.31□□□□□ -1.08
CDH3-210ENST00000569117 C1RLQ9NZP8 487 aa8.31□□□□□ -1.08
CDH3-210ENST00000569117 MMP24Q9Y5R2 645 aa8.31□□□□□ -1.08
CDH3-210ENST00000569117 CUBNO60494 3623 aa8.31□□□□□ -1.08
CDH3-210ENST00000569117 GPR137BO60478 399 aa8.3□□□□□ -1.08
CDH3-210ENST00000569117 OR2A4O95047 310 aa8.3□□□□□ -1.08
CDH3-210ENST00000569117 IL6RP08887 468 aaPredicted RBP8.3□□□□□ -1.08
CDH3-210ENST00000569117 F2RL1P55085 397 aa8.3□□□□□ -1.08
CDH3-210ENST00000569117 C5orf64Q2M2E5 130 aa8.3□□□□□ -1.08
CDH3-210ENST00000569117 LIN54Q6MZP7 749 aa8.3□□□□□ -1.08
CDH3-210ENST00000569117 Q6ZNX1 250 aa8.3□□□□□ -1.08
CDH3-210ENST00000569117 SSX9Q7RTT3 188 aa8.3□□□□□ -1.08
CDH3-210ENST00000569117 H2BFWTQ7Z2G1 175 aa8.3□□□□□ -1.08
CDH3-210ENST00000569117 LYZL2Q7Z4W2 148 aa8.3□□□□□ -1.08
CDH3-210ENST00000569117 C5orf56Q8N8D9 126 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms