RNA–Protein interactions for RNA: ENST00000566635.5

HERC2-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-208ENST00000566635 RBKSQ9H477 322 aa14.26□□□□□ -0.13
HERC2-208ENST00000566635 ITPR2Q14571 2701 aa14.26□□□□□ -0.13
HERC2-208ENST00000566635 TET2Q6N021 2002 aaPredicted RBP14.26□□□□□ -0.13
HERC2-208ENST00000566635 CR1P17927 2039 aa14.26□□□□□ -0.13
HERC2-208ENST00000566635 FAM90A9PA6NNJ1 464 aa14.26□□□□□ -0.13
HERC2-208ENST00000566635 H3BP45 60 aa14.26□□□□□ -0.13
HERC2-208ENST00000566635 TRIM77I1YAP6 450 aa14.26□□□□□ -0.13
HERC2-208ENST00000566635 TIMM23O14925 209 aa14.26□□□□□ -0.13
HERC2-208ENST00000566635 SYNGR2O43760 224 aa14.26□□□□□ -0.13
HERC2-208ENST00000566635 MC5RP33032 325 aa14.26□□□□□ -0.13
HERC2-208ENST00000566635 NUP62P37198 522 aaPredicted RBP14.26□□□□□ -0.13
HERC2-208ENST00000566635 CEACAM3P40198 252 aa14.26□□□□□ -0.13
HERC2-208ENST00000566635 UBE2E1P51965 193 aa14.26□□□□□ -0.13
HERC2-208ENST00000566635 PAX9P55771 341 aa14.26□□□□□ -0.13
HERC2-208ENST00000566635 VAMP2P63027 116 aa14.26□□□□□ -0.13
HERC2-208ENST00000566635 LRRC20Q8TCA0 184 aa14.26□□□□□ -0.13
HERC2-208ENST00000566635 ZANQ9Y493 2812 aa14.25□□□□□ -0.13
HERC2-208ENST00000566635 IGHV3OR16-10A0A075B7F0 116 aa14.25□□□□□ -0.13
HERC2-208ENST00000566635 FAM90A26D6RGX4 464 aa14.25□□□□□ -0.13
HERC2-208ENST00000566635 MYOD1P15172 320 aa14.25□□□□□ -0.13
HERC2-208ENST00000566635 PVALBP20472 110 aaPredicted RBP14.25□□□□□ -0.13
HERC2-208ENST00000566635 P2RY1P47900 373 aa14.25□□□□□ -0.13
HERC2-208ENST00000566635 RPS16P62249 146 aaKnown RBP14.25□□□□□ -0.13
HERC2-208ENST00000566635 SSX2Q16385 188 aa14.25□□□□□ -0.13
HERC2-208ENST00000566635 ZDHHC16Q969W1 377 aa14.25□□□□□ -0.13
HERC2-208ENST00000566635 C1orf159Q96HA4 380 aa14.25□□□□□ -0.13
HERC2-208ENST00000566635 REG4Q9BYZ8 158 aa14.25□□□□□ -0.13
HERC2-208ENST00000566635 MS4A7Q9GZW8 240 aaPredicted RBP14.25□□□□□ -0.13
HERC2-208ENST00000566635 ZC4H2Q9NQZ6 224 aa14.25□□□□□ -0.13
HERC2-208ENST00000566635 FAM24AA6NFZ4 105 aa14.24□□□□□ -0.13
HERC2-208ENST00000566635 BCL2L11O43521 198 aa14.24□□□□□ -0.13
HERC2-208ENST00000566635 IGLV2-23P01705 113 aa14.24□□□□□ -0.13
HERC2-208ENST00000566635 CAV2P51636 162 aa14.24□□□□□ -0.13
HERC2-208ENST00000566635 LGALS4P56470 323 aa14.24□□□□□ -0.13
HERC2-208ENST00000566635 UBE2KP61086 200 aa14.24□□□□□ -0.13
HERC2-208ENST00000566635 LOXL1Q08397 574 aaPredicted RBP14.24□□□□□ -0.13
HERC2-208ENST00000566635 TEX261Q6UWH6 196 aa14.24□□□□□ -0.13
HERC2-208ENST00000566635 CFHR4Q92496 578 aa14.24□□□□□ -0.13
HERC2-208ENST00000566635 BSCL2Q96G97 398 aaPredicted RBP14.24□□□□□ -0.13
HERC2-208ENST00000566635 HIF1ANQ9NWT6 349 aa14.24□□□□□ -0.13
HERC2-208ENST00000566635 U3KQ87 197 aa14.24□□□□□ -0.13
HERC2-208ENST00000566635 CENPVL3A0A0U1RRI6 287 aa14.24□□□□□ -0.13
HERC2-208ENST00000566635 IGSF23A1L1A6 192 aa14.24□□□□□ -0.13
HERC2-208ENST00000566635 C15orf61A6NNL5 157 aa14.24□□□□□ -0.13
HERC2-208ENST00000566635 SNAPC5O75971 98 aa14.24□□□□□ -0.13
HERC2-208ENST00000566635 IL6RP08887 468 aaPredicted RBP14.24□□□□□ -0.13
HERC2-208ENST00000566635 CNTFRP26992 372 aa14.24□□□□□ -0.13
HERC2-208ENST00000566635 PUSL1Q8N0Z8 303 aaKnown RBP14.24□□□□□ -0.13
HERC2-208ENST00000566635 OR2C3Q8N628 320 aa14.24□□□□□ -0.13
HERC2-208ENST00000566635 LYRM2Q9NU23 88 aaPredicted RBP14.24□□□□□ -0.13
HERC2-208ENST00000566635 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.24□□□□□ -0.138e-7■■■■■ 28.5
HERC2-208ENST00000566635 KANTRA0A1W2PQU2 76 aa14.23□□□□□ -0.13
HERC2-208ENST00000566635 SAA4P35542 130 aa14.23□□□□□ -0.13
HERC2-208ENST00000566635 AARDQ4LEZ3 155 aa14.23□□□□□ -0.13
HERC2-208ENST00000566635 FBLN7Q53RD9 439 aa14.23□□□□□ -0.13
HERC2-208ENST00000566635 MINOS1Q5TGZ0 78 aa14.23□□□□□ -0.13
HERC2-208ENST00000566635 RUSC1-AS1Q66K80 236 aa14.23□□□□□ -0.13
HERC2-208ENST00000566635 AJUBAQ96IF1 538 aa14.23□□□□□ -0.13
HERC2-208ENST00000566635 MINOS1-NBL1R4GNA1 71 aa14.23□□□□□ -0.13
HERC2-208ENST00000566635 TRAV40A0A0B4J280 105 aa14.23□□□□□ -0.13
HERC2-208ENST00000566635 UPK2O00526 184 aa14.23□□□□□ -0.13
HERC2-208ENST00000566635 GPR137BO60478 399 aa14.23□□□□□ -0.13
HERC2-208ENST00000566635 KBTBD11O94819 623 aa14.23□□□□□ -0.13
HERC2-208ENST00000566635 C4BPBP20851 252 aa14.23□□□□□ -0.13
HERC2-208ENST00000566635 CD24P25063 80 aa14.23□□□□□ -0.13
HERC2-208ENST00000566635 ARHGDIBP52566 201 aa14.23□□□□□ -0.13
HERC2-208ENST00000566635 OR8H3Q8N146 312 aa14.23□□□□□ -0.13
HERC2-208ENST00000566635 PIP4P2Q8N4L2 257 aa14.23□□□□□ -0.13
HERC2-208ENST00000566635 LINC01356Q8N9X3 169 aa14.23□□□□□ -0.13
HERC2-208ENST00000566635 ZNF680Q8NEM1 530 aa14.23□□□□□ -0.13
HERC2-208ENST00000566635 OR8H1Q8NGG4 311 aa14.23□□□□□ -0.13
HERC2-208ENST00000566635 RAB40CQ96S21 281 aa14.23□□□□□ -0.13
HERC2-208ENST00000566635 SMIM3Q9BZL3 60 aa14.23□□□□□ -0.13
HERC2-208ENST00000566635 C7orf69Q9H7B7 122 aa14.23□□□□□ -0.13
HERC2-208ENST00000566635 TPSG1Q9NRR2 321 aa14.23□□□□□ -0.13
HERC2-208ENST00000566635 BET1LQ9NYM9 111 aa14.23□□□□□ -0.13
HERC2-208ENST00000566635 TBL2Q9Y4P3 447 aaKnown RBP14.23□□□□□ -0.13
HERC2-208ENST00000566635 NPFFO15130 113 aa14.22□□□□□ -0.13
HERC2-208ENST00000566635 SLC25A17O43808 307 aa14.22□□□□□ -0.13
HERC2-208ENST00000566635 VENTXO95231 258 aa14.22□□□□□ -0.13
HERC2-208ENST00000566635 IFNA17P01571 189 aa14.22□□□□□ -0.13
HERC2-208ENST00000566635 EWSR1Q01844 656 aaKnown RBP eCLIP14.22□□□□□ -0.13
HERC2-208ENST00000566635 PRSS57Q6UWY2 283 aa14.22□□□□□ -0.13
HERC2-208ENST00000566635 TMEM14BQ9NUH8 114 aa14.22□□□□□ -0.13
HERC2-208ENST00000566635 FBXL17Q9UF56 701 aa14.22□□□□□ -0.13
HERC2-208ENST00000566635 FOXA2Q9Y261 457 aaPredicted RBP14.22□□□□□ -0.13
HERC2-208ENST00000566635 ZNF469Q96JG9 3925 aaPredicted RBP14.21□□□□□ -0.13
HERC2-208ENST00000566635 TRAV20A0A0B4J274 112 aa14.21□□□□□ -0.13
HERC2-208ENST00000566635 CEBPZOSA8MTT3 80 aa14.21□□□□□ -0.13
HERC2-208ENST00000566635 CFDP00746 253 aaPredicted RBP14.21□□□□□ -0.13
HERC2-208ENST00000566635 NHLH2Q02577 135 aa14.21□□□□□ -0.13
HERC2-208ENST00000566635 FAM122CQ6P4D5 195 aa14.21□□□□□ -0.13
HERC2-208ENST00000566635 ZNF429Q86V71 674 aa14.21□□□□□ -0.13
HERC2-208ENST00000566635 TMEM252Q8N6L7 170 aa14.21□□□□□ -0.13
HERC2-208ENST00000566635 DTD1Q8TEA8 209 aa14.21□□□□□ -0.13
HERC2-208ENST00000566635 PSENENQ9NZ42 101 aa14.21□□□□□ -0.13
HERC2-208ENST00000566635 AKAP9Q99996 3911 aa14.21□□□□□ -0.13
HERC2-208ENST00000566635 IGHV4-38-2P0DP08 117 aa14.21□□□□□ -0.13
HERC2-208ENST00000566635 TMEM267Q0VDI3 215 aaPredicted RBP14.21□□□□□ -0.13
HERC2-208ENST00000566635 HABP2Q14520 560 aaPredicted RBP14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms