RNA–Protein interactions for RNA: ENST00000566612.5

CDH1-210, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 4,138 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-210ENST00000566612 NAT8BQ9UHF3 227 aa9.7□□□□□ -0.86
CDH1-210ENST00000566612 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.69□□□□□ -0.86
CDH1-210ENST00000566612 COLCA2A8K830 154 aa9.69□□□□□ -0.86
CDH1-210ENST00000566612 CXorf1O96002 111 aa9.69□□□□□ -0.86
CDH1-210ENST00000566612 STARD4Q96DR4 205 aa9.69□□□□□ -0.86
CDH1-210ENST00000566612 PACRGQ96M98 296 aaPredicted RBP9.69□□□□□ -0.86
CDH1-210ENST00000566612 ZNF714Q96N38 554 aa9.69□□□□□ -0.86
CDH1-210ENST00000566612 USP34Q70CQ2 3546 aa9.69□□□□□ -0.86
CDH1-210ENST00000566612 CEP295Q9C0D2 2601 aa9.69□□□□□ -0.86
CDH1-210ENST00000566612 ARL14EPLP0DKL9 152 aa9.69□□□□□ -0.86
CDH1-210ENST00000566612 CNN1P51911 297 aaKnown RBP9.69□□□□□ -0.86
CDH1-210ENST00000566612 PRB3Q04118 309 aaPredicted RBP9.69□□□□□ -0.86
CDH1-210ENST00000566612 HCP5Q6MZN7 132 aa9.69□□□□□ -0.86
CDH1-210ENST00000566612 CD40P25942 277 aa9.69□□□□□ -0.86
CDH1-210ENST00000566612 ARSJQ5FYB0 599 aaPredicted RBP9.69□□□□□ -0.86
CDH1-210ENST00000566612 DBX2Q6ZNG2 339 aa9.69□□□□□ -0.86
CDH1-210ENST00000566612 OR1B1Q8NGR6 318 aa9.69□□□□□ -0.86
CDH1-210ENST00000566612 OR1L8Q8NGR8 309 aa9.69□□□□□ -0.86
CDH1-210ENST00000566612 TECRQ9NZ01 308 aaKnown RBP9.69□□□□□ -0.86
CDH1-210ENST00000566612 IDI2-AS1Q9NZ38 188 aa9.69□□□□□ -0.86
CDH1-210ENST00000566612 INSIG2Q9Y5U4 225 aa9.69□□□□□ -0.86
CDH1-210ENST00000566612 NCBP2LA6PVI3 153 aaKnown RBP9.68□□□□□ -0.86
CDH1-210ENST00000566612 PDE6DO43924 150 aa9.68□□□□□ -0.86
CDH1-210ENST00000566612 TMEM11P17152 192 aa9.68□□□□□ -0.86
CDH1-210ENST00000566612 IL15RAQ13261 267 aa9.68□□□□□ -0.86
CDH1-210ENST00000566612 GCSAMLQ5JQS6 135 aa9.68□□□□□ -0.86
CDH1-210ENST00000566612 GCSAMQ8N6F7 178 aa9.68□□□□□ -0.86
CDH1-210ENST00000566612 OR5B3Q8NH48 314 aa9.68□□□□□ -0.86
CDH1-210ENST00000566612 MRPL37Q9BZE1 423 aaKnown RBP9.68□□□□□ -0.86
CDH1-210ENST00000566612 FGF23Q9GZV9 251 aaPredicted RBP9.68□□□□□ -0.86
CDH1-210ENST00000566612 H0Y8G0 127 aa9.68□□□□□ -0.86
CDH1-210ENST00000566612 SCGB2A1O75556 95 aa9.68□□□□□ -0.86
CDH1-210ENST00000566612 TRGC1P0CF51 173 aa9.68□□□□□ -0.86
CDH1-210ENST00000566612 WDR86Q86TI4 376 aa9.68□□□□□ -0.86
CDH1-210ENST00000566612 Q8WTZ3 238 aa9.68□□□□□ -0.86
CDH1-210ENST00000566612 GATAD1Q8WUU5 269 aa9.68□□□□□ -0.86
CDH1-210ENST00000566612 P2RX4Q99571 388 aa9.68□□□□□ -0.86
CDH1-210ENST00000566612 CLCF1Q9UBD9 225 aa9.68□□□□□ -0.86
CDH1-210ENST00000566612 ZDHHC8Q9ULC8 765 aa9.68□□□□□ -0.86
CDH1-210ENST00000566612 A0A1W2PNU3 283 aaPredicted RBP9.68□□□□□ -0.86
CDH1-210ENST00000566612 HELTA6NFD8 242 aa9.68□□□□□ -0.86
CDH1-210ENST00000566612 ARL16Q0P5N6 197 aa9.68□□□□□ -0.86
CDH1-210ENST00000566612 SPNS3Q6ZMD2 512 aa9.68□□□□□ -0.86
CDH1-210ENST00000566612 ZNF383Q8NA42 475 aa9.68□□□□□ -0.86
CDH1-210ENST00000566612 OR4X1Q8NH49 305 aa9.68□□□□□ -0.86
CDH1-210ENST00000566612 VSTM2AQ8TAG5 236 aa9.68□□□□□ -0.86
CDH1-210ENST00000566612 ANAPC16Q96DE5 110 aa9.68□□□□□ -0.86
CDH1-210ENST00000566612 SFXN3Q9BWM7 321 aa9.68□□□□□ -0.86
CDH1-210ENST00000566612 SLC25A17O43808 307 aa9.67□□□□□ -0.86
CDH1-210ENST00000566612 REG1AP05451 166 aa9.67□□□□□ -0.86
CDH1-210ENST00000566612 HABP2Q14520 560 aaPredicted RBP9.67□□□□□ -0.86
CDH1-210ENST00000566612 MORN2Q502X0 79 aa9.67□□□□□ -0.86
CDH1-210ENST00000566612 OR51G1Q8NGK1 321 aa9.67□□□□□ -0.86
CDH1-210ENST00000566612 COQ2Q96H96 371 aa9.67□□□□□ -0.86
CDH1-210ENST00000566612 YLPM1P49750 1951 aaKnown RBP9.67□□□□□ -0.86
CDH1-210ENST00000566612 CA2P00918 260 aa9.67□□□□□ -0.86
CDH1-210ENST00000566612 SLC25A5P05141 298 aaKnown RBP9.67□□□□□ -0.86
CDH1-210ENST00000566612 SRSF7Q16629 238 aaKnown RBP eCLIP9.67□□□□□ -0.86
CDH1-210ENST00000566612 CD177Q8N6Q3 437 aa9.67□□□□□ -0.86
CDH1-210ENST00000566612 ZNF439Q8NDP4 499 aa9.67□□□□□ -0.86
CDH1-210ENST00000566612 BORCS7Q96B45 105 aa9.67□□□□□ -0.86
CDH1-210ENST00000566612 LAMA1P25391 3075 aa9.67□□□□□ -0.86
CDH1-210ENST00000566612 OR9G9P0C7N8 305 aa9.67□□□□□ -0.86
CDH1-210ENST00000566612 TDGF1P13385 188 aa9.67□□□□□ -0.86
CDH1-210ENST00000566612 GATA2P23769 480 aaPredicted RBP9.67□□□□□ -0.86
CDH1-210ENST00000566612 KRTDAPP60985 99 aa9.67□□□□□ -0.86
CDH1-210ENST00000566612 ZNF585BQ52M93 769 aa9.67□□□□□ -0.86
CDH1-210ENST00000566612 WFIKKN1Q96NZ8 548 aa9.67□□□□□ -0.86
CDH1-210ENST00000566612 CCL21O00585 134 aa9.67□□□□□ -0.86
CDH1-210ENST00000566612 CLN5O75503 358 aa9.67□□□□□ -0.86
CDH1-210ENST00000566612 KBTBD11O94819 623 aa9.67□□□□□ -0.86
CDH1-210ENST00000566612 CCL3L1P16619 93 aa9.67□□□□□ -0.86
CDH1-210ENST00000566612 PRRX1P54821 245 aa9.67□□□□□ -0.86
CDH1-210ENST00000566612 MRPL54Q6P161 138 aaKnown RBP9.67□□□□□ -0.86
CDH1-210ENST00000566612 RPRMLQ8N4K4 120 aa9.67□□□□□ -0.86
CDH1-210ENST00000566612 KDF1Q8NAX2 398 aaPredicted RBP9.67□□□□□ -0.86
CDH1-210ENST00000566612 PLSCR4Q9NRQ2 329 aa9.67□□□□□ -0.86
CDH1-210ENST00000566612 A0A1W2PN81 502 aa9.66□□□□□ -0.86
CDH1-210ENST00000566612 LINC00473A8K010 186 aa9.66□□□□□ -0.86
CDH1-210ENST00000566612 MPDU1O75352 247 aa9.66□□□□□ -0.86
CDH1-210ENST00000566612 PMCHP20382 165 aa9.66□□□□□ -0.86
CDH1-210ENST00000566612 CAMPP49913 170 aa9.66□□□□□ -0.86
CDH1-210ENST00000566612 OR4A47Q6IF82 309 aa9.66□□□□□ -0.86
CDH1-210ENST00000566612 SIGLECL1Q8N7X8 197 aa9.66□□□□□ -0.86
CDH1-210ENST00000566612 TMEM167BQ9NRX6 74 aa9.66□□□□□ -0.86
CDH1-210ENST00000566612 KBTBD11-OT1A0A1B0GTJ5 212 aa9.66□□□□□ -0.86
CDH1-210ENST00000566612 FAM87AP0C7U9 286 aa9.66□□□□□ -0.86
CDH1-210ENST00000566612 DUTP33316 252 aaKnown RBP9.66□□□□□ -0.86
CDH1-210ENST00000566612 IER3P46695 156 aa9.66□□□□□ -0.86
CDH1-210ENST00000566612 ATP5G3P48201 142 aa9.66□□□□□ -0.86
CDH1-210ENST00000566612 LYZP61626 148 aa9.66□□□□□ -0.86
CDH1-210ENST00000566612 RANP62826 216 aaKnown RBP9.66□□□□□ -0.86
CDH1-210ENST00000566612 RPL8P62917 257 aaKnown RBP9.66□□□□□ -0.86
CDH1-210ENST00000566612 Q6ZS49 121 aa9.66□□□□□ -0.86
CDH1-210ENST00000566612 RPP25LQ8N5L8 163 aaKnown RBP9.66□□□□□ -0.86
CDH1-210ENST00000566612 WDR31Q8NA23 367 aa9.66□□□□□ -0.86
CDH1-210ENST00000566612 MS4A10Q96PG2 267 aa9.66□□□□□ -0.86
CDH1-210ENST00000566612 RRHO14718 337 aa9.66□□□□□ -0.86
CDH1-210ENST00000566612 BSPH1Q075Z2 132 aa9.66□□□□□ -0.86
CDH1-210ENST00000566612 TLN1Q9Y490 2541 aaKnown RBP9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms