RNA–Protein interactions for RNA: ENST00000566009.5

SMPD3-206, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 4

Gene SMPD3, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-206ENST00000566009 TEX47Q8TBZ9 253 aa6.08□□□□□ -1.44
SMPD3-206ENST00000566009 CCDC124Q96CT7 223 aaKnown RBP6.08□□□□□ -1.44
SMPD3-206ENST00000566009 SLC7A6OSQ96CW6 309 aaPredicted RBP6.08□□□□□ -1.44
SMPD3-206ENST00000566009 NIPSNAP1Q9BPW8 284 aa6.08□□□□□ -1.44
SMPD3-206ENST00000566009 ZNF556Q9HAH1 456 aa6.08□□□□□ -1.44
SMPD3-206ENST00000566009 IGHV3OR16-13A0A075B7E8 117 aa6.07□□□□□ -1.44
SMPD3-206ENST00000566009 IGHV3-74A0A0B4J1X5 117 aa6.07□□□□□ -1.44
SMPD3-206ENST00000566009 CCDC182A6NF36 153 aa6.07□□□□□ -1.44
SMPD3-206ENST00000566009 TEX22C9J3V5 150 aa6.07□□□□□ -1.44
SMPD3-206ENST00000566009 H3BN98 237 aa6.07□□□□□ -1.44
SMPD3-206ENST00000566009 GABRPO00591 440 aa6.07□□□□□ -1.44
SMPD3-206ENST00000566009 ATP5HO75947 161 aa6.07□□□□□ -1.44
SMPD3-206ENST00000566009 CDRT1O95170 752 aa6.07□□□□□ -1.44
SMPD3-206ENST00000566009 HMGN1P05114 100 aa6.07□□□□□ -1.44
SMPD3-206ENST00000566009 CRYGCP07315 174 aa6.07□□□□□ -1.44
SMPD3-206ENST00000566009 ANXA8P13928 327 aa6.07□□□□□ -1.44
SMPD3-206ENST00000566009 HIST1H1BP16401 226 aaKnown RBP6.07□□□□□ -1.44
SMPD3-206ENST00000566009 RASSF2P50749 326 aa6.07□□□□□ -1.44
SMPD3-206ENST00000566009 FLOT2Q14254 428 aa6.07□□□□□ -1.44
SMPD3-206ENST00000566009 GINS1Q14691 196 aa6.07□□□□□ -1.44
SMPD3-206ENST00000566009 TMEM244Q5VVB8 128 aa6.07□□□□□ -1.44
SMPD3-206ENST00000566009 ZNF414Q96IQ9 312 aa6.07□□□□□ -1.44
SMPD3-206ENST00000566009 ZNF430Q9H8G1 570 aaPredicted RBP6.07□□□□□ -1.44
SMPD3-206ENST00000566009 POMPQ9Y244 141 aa6.07□□□□□ -1.44
SMPD3-206ENST00000566009 IGLV11-55A0A075B6I3 123 aa6.06□□□□□ -1.44
SMPD3-206ENST00000566009 TRAV2A0A0B4J234 112 aa6.06□□□□□ -1.44
SMPD3-206ENST00000566009 TCRBV3S1A0A5B6 114 aa6.06□□□□□ -1.44
SMPD3-206ENST00000566009 DBX1A6NMT0 343 aa6.06□□□□□ -1.44
SMPD3-206ENST00000566009 ZNF670-ZNF695F2Z2N8 137 aa6.06□□□□□ -1.44
SMPD3-206ENST00000566009 FKBP6O75344 327 aa6.06□□□□□ -1.44
SMPD3-206ENST00000566009 DHFRP00374 187 aa6.06□□□□□ -1.44
SMPD3-206ENST00000566009 KRT8P05787 483 aa6.06□□□□□ -1.44
SMPD3-206ENST00000566009 OSMP13725 252 aa6.06□□□□□ -1.44
SMPD3-206ENST00000566009 FGF9P31371 208 aaPredicted RBP6.06□□□□□ -1.44
SMPD3-206ENST00000566009 UBE2KP61086 200 aa6.06□□□□□ -1.44
SMPD3-206ENST00000566009 NUTF2P61970 127 aaKnown RBP6.06□□□□□ -1.44
SMPD3-206ENST00000566009 CDK5Q00535 292 aa6.06□□□□□ -1.44
SMPD3-206ENST00000566009 VMA21Q3ZAQ7 101 aa6.06□□□□□ -1.44
SMPD3-206ENST00000566009 SSX6Q7RTT6 188 aa6.06□□□□□ -1.44
SMPD3-206ENST00000566009 SLC35F2Q8IXU6 374 aa6.06□□□□□ -1.44
SMPD3-206ENST00000566009 IL1F10Q8WWZ1 152 aa6.06□□□□□ -1.44
SMPD3-206ENST00000566009 NRBF2Q96F24 287 aa6.06□□□□□ -1.44
SMPD3-206ENST00000566009 GPER1Q99527 375 aa6.06□□□□□ -1.44
SMPD3-206ENST00000566009 TEX12Q9BXU0 123 aa6.06□□□□□ -1.44
SMPD3-206ENST00000566009 FAM192AQ9GZU8 254 aa6.06□□□□□ -1.44
SMPD3-206ENST00000566009 LRRC42Q9Y546 428 aa6.06□□□□□ -1.44
SMPD3-206ENST00000566009 LOC102723971A0A1B0GUV8 181 aa6.05□□□□□ -1.44
SMPD3-206ENST00000566009 OR2T8A6NH00 312 aa6.05□□□□□ -1.44
SMPD3-206ENST00000566009 E7EUB6 86 aa6.05□□□□□ -1.44
SMPD3-206ENST00000566009 ITGB1BP1O14713 200 aa6.05□□□□□ -1.44
SMPD3-206ENST00000566009 CA11O75493 328 aa6.05□□□□□ -1.44
SMPD3-206ENST00000566009 IL6RP08887 468 aaPredicted RBP6.05□□□□□ -1.44
SMPD3-206ENST00000566009 DEFA4P12838 97 aa6.05□□□□□ -1.44
SMPD3-206ENST00000566009 AREGP15514 252 aa6.05□□□□□ -1.44
SMPD3-206ENST00000566009 PTBP1P26599 531 aaKnown RBP eCLIP6.05□□□□□ -1.44
SMPD3-206ENST00000566009 TAGLNQ01995 201 aaKnown RBP6.05□□□□□ -1.44
SMPD3-206ENST00000566009 Q6ZRU5 148 aa6.05□□□□□ -1.44
SMPD3-206ENST00000566009 C10orf67Q8IYJ2 551 aa6.05□□□□□ -1.44
SMPD3-206ENST00000566009 HS3ST5Q8IZT8 346 aa6.05□□□□□ -1.44
SMPD3-206ENST00000566009 DUSP18Q8NEJ0 188 aa6.05□□□□□ -1.44
SMPD3-206ENST00000566009 OR51A4Q8NGJ6 313 aa6.05□□□□□ -1.44
SMPD3-206ENST00000566009 CYYR1Q96J86 154 aa6.05□□□□□ -1.44
SMPD3-206ENST00000566009 C11orf54Q9H0W9 315 aaPredicted RBP6.05□□□□□ -1.44
SMPD3-206ENST00000566009 SPACA1Q9HBV2 294 aa6.05□□□□□ -1.44
SMPD3-206ENST00000566009 GMPPBQ9Y5P6 360 aa6.05□□□□□ -1.44
SMPD3-206ENST00000566009 TRAV3A0A0B4J244 114 aa6.04□□□□□ -1.44
SMPD3-206ENST00000566009 METTL15A6NJ78 407 aa6.04□□□□□ -1.44
SMPD3-206ENST00000566009 LINC00473A8K010 186 aa6.04□□□□□ -1.44
SMPD3-206ENST00000566009 NPIPB6E9PJ23 425 aa6.04□□□□□ -1.44
SMPD3-206ENST00000566009 M0R1X1 148 aa6.04□□□□□ -1.44
SMPD3-206ENST00000566009 NUPL2O15504 423 aaKnown RBP6.04□□□□□ -1.44
SMPD3-206ENST00000566009 SC5DO75845 299 aa6.04□□□□□ -1.44
SMPD3-206ENST00000566009 ISG15P05161 165 aa6.04□□□□□ -1.44
SMPD3-206ENST00000566009 CD5P06127 495 aa6.04□□□□□ -1.44
SMPD3-206ENST00000566009 ZNF688P0C7X2 276 aa6.04□□□□□ -1.44
SMPD3-206ENST00000566009 DAPP51397 102 aa6.04□□□□□ -1.44
SMPD3-206ENST00000566009 RPL37AP61513 92 aaKnown RBP6.04□□□□□ -1.44
SMPD3-206ENST00000566009 RPL11P62913 178 aaKnown RBP6.04□□□□□ -1.44
SMPD3-206ENST00000566009 TMEM236Q5W0B7 351 aa6.04□□□□□ -1.44
SMPD3-206ENST00000566009 RAB12Q6IQ22 244 aa6.04□□□□□ -1.44
SMPD3-206ENST00000566009 CBR4Q8N4T8 237 aa6.04□□□□□ -1.44
SMPD3-206ENST00000566009 OR13C3Q8NGS6 347 aa6.04□□□□□ -1.44
SMPD3-206ENST00000566009 MRPL30Q8TCC3 161 aaKnown RBP6.04□□□□□ -1.44
SMPD3-206ENST00000566009 DNAJC9Q8WXX5 260 aa6.04□□□□□ -1.44
SMPD3-206ENST00000566009 RAB40CQ96S21 281 aa6.04□□□□□ -1.44
SMPD3-206ENST00000566009 METTL9Q9H1A3 318 aa6.04□□□□□ -1.44
SMPD3-206ENST00000566009 TVP23BQ9NYZ1 205 aa6.04□□□□□ -1.44
SMPD3-206ENST00000566009 IL36GQ9NZH8 169 aa6.04□□□□□ -1.44
SMPD3-206ENST00000566009 H2AFY2Q9P0M6 372 aaPredicted RBP6.04□□□□□ -1.44
SMPD3-206ENST00000566009 RABAC1Q9UI14 185 aa6.04□□□□□ -1.44
SMPD3-206ENST00000566009 AP4S1Q9Y587 144 aa6.04□□□□□ -1.44
SMPD3-206ENST00000566009 PEX16Q9Y5Y5 336 aa6.04□□□□□ -1.44
SMPD3-206ENST00000566009 A0A1W2PP11 408 aa6.03□□□□□ -1.44
SMPD3-206ENST00000566009 UBE2QL1A1L167 161 aa6.03□□□□□ -1.44
SMPD3-206ENST00000566009 G3V2T6 193 aa6.03□□□□□ -1.44
SMPD3-206ENST00000566009 SIVA1O15304 175 aa6.03□□□□□ -1.44
SMPD3-206ENST00000566009 CREBL2O60519 120 aaPredicted RBP6.03□□□□□ -1.44
SMPD3-206ENST00000566009 DEFB130BP0DP73 79 aa6.03□□□□□ -1.44
SMPD3-206ENST00000566009 DEFB130AP0DP74 79 aa6.03□□□□□ -1.44
SMPD3-206ENST00000566009 IGFBP3P17936 291 aaPredicted RBP6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms