RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 SLC2A9Q9NRM0 540 aa5.53□□□□□ -1.52
HERPUD1-206ENST00000563343 RDH8Q9NYR8 311 aa5.53□□□□□ -1.52
HERPUD1-206ENST00000563343 A0A0A6YYD4 124 aa5.52□□□□□ -1.53
HERPUD1-206ENST00000563343 CGB1A6NKQ9 187 aa5.52□□□□□ -1.53
HERPUD1-206ENST00000563343 TGOLN2O43493 480 aa5.52□□□□□ -1.53
HERPUD1-206ENST00000563343 LALBAP00709 142 aa5.52□□□□□ -1.53
HERPUD1-206ENST00000563343 ZNF735P0CB33 412 aa5.52□□□□□ -1.53
HERPUD1-206ENST00000563343 RRASP10301 218 aa5.52□□□□□ -1.53
HERPUD1-206ENST00000563343 DUTP33316 252 aaKnown RBP5.52□□□□□ -1.53
HERPUD1-206ENST00000563343 RPS27AP62979 156 aaKnown RBP5.52□□□□□ -1.53
HERPUD1-206ENST00000563343 RTL8BQ17RB0 113 aa5.52□□□□□ -1.53
HERPUD1-206ENST00000563343 CCDC58Q4VC31 144 aa5.52□□□□□ -1.53
HERPUD1-206ENST00000563343 MEDAGQ5VYS4 303 aa5.52□□□□□ -1.53
HERPUD1-206ENST00000563343 FAM90A2PQ658T7 463 aa5.52□□□□□ -1.53
HERPUD1-206ENST00000563343 OR10K2Q6IF99 312 aa5.52□□□□□ -1.53
HERPUD1-206ENST00000563343 SSX9Q7RTT3 188 aa5.52□□□□□ -1.53
HERPUD1-206ENST00000563343 OR52I1Q8NGK6 324 aa5.52□□□□□ -1.53
HERPUD1-206ENST00000563343 OSR1Q8TAX0 266 aaPredicted RBP5.52□□□□□ -1.53
HERPUD1-206ENST00000563343 NEDD4LQ96PU5 975 aa5.52□□□□□ -1.53
HERPUD1-206ENST00000563343 MYCBPQ99417 103 aaPredicted RBP5.52□□□□□ -1.53
HERPUD1-206ENST00000563343 THTPAQ9BU02 230 aa5.52□□□□□ -1.53
HERPUD1-206ENST00000563343 TM2D1Q9BX74 207 aa5.52□□□□□ -1.53
HERPUD1-206ENST00000563343 FAM107BQ9H098 131 aa5.52□□□□□ -1.53
HERPUD1-206ENST00000563343 OR2D2Q9H210 308 aa5.52□□□□□ -1.53
HERPUD1-206ENST00000563343 Q9N2K0 584 aa5.52□□□□□ -1.53
HERPUD1-206ENST00000563343 DAZ1Q9NQZ3 744 aaKnown RBP5.52□□□□□ -1.53
HERPUD1-206ENST00000563343 K7EMT4 169 aa5.51□□□□□ -1.53
HERPUD1-206ENST00000563343 ACTL6BO94805 426 aa5.51□□□□□ -1.53
HERPUD1-206ENST00000563343 CD3GP09693 182 aa5.51□□□□□ -1.53
HERPUD1-206ENST00000563343 RPA2P15927 270 aa5.51□□□□□ -1.53
HERPUD1-206ENST00000563343 HIST1H1BP16401 226 aaKnown RBP5.51□□□□□ -1.53
HERPUD1-206ENST00000563343 RPL27AP46776 148 aaKnown RBP5.51□□□□□ -1.53
HERPUD1-206ENST00000563343 CMC4P56277 68 aaPredicted RBP5.51□□□□□ -1.53
HERPUD1-206ENST00000563343 QRFPP83859 136 aa5.51□□□□□ -1.53
HERPUD1-206ENST00000563343 CBX3Q13185 183 aa5.51□□□□□ -1.53
HERPUD1-206ENST00000563343 UNC119Q13432 240 aa5.51□□□□□ -1.53
HERPUD1-206ENST00000563343 FLOT2Q14254 428 aa5.51□□□□□ -1.53
HERPUD1-206ENST00000563343 RNF212Q495C1 297 aa5.51□□□□□ -1.53
HERPUD1-206ENST00000563343 Q499Y3 187 aa5.51□□□□□ -1.53
HERPUD1-206ENST00000563343 PLET1Q6UQ28 207 aa5.51□□□□□ -1.53
HERPUD1-206ENST00000563343 CSNK1G2-AS1Q8NCQ2 148 aa5.51□□□□□ -1.53
HERPUD1-206ENST00000563343 SMIM19Q96E16 107 aa5.51□□□□□ -1.53
HERPUD1-206ENST00000563343 PGLYRP3Q96LB9 341 aa5.51□□□□□ -1.53
HERPUD1-206ENST00000563343 CXorf58Q96LI9 332 aa5.51□□□□□ -1.53
HERPUD1-206ENST00000563343 RNF2Q99496 336 aa5.51□□□□□ -1.53
HERPUD1-206ENST00000563343 RIMS4Q9H426 269 aaPredicted RBP5.51□□□□□ -1.53
HERPUD1-206ENST00000563343 CHMP1AQ9HD42 196 aaPredicted RBP5.51□□□□□ -1.53
HERPUD1-206ENST00000563343 MRPS18AQ9NVS2 196 aaKnown RBP5.51□□□□□ -1.53
HERPUD1-206ENST00000563343 GHRLQ9UBU3 117 aa5.51□□□□□ -1.53
HERPUD1-206ENST00000563343 AK3Q9UIJ7 227 aa5.51□□□□□ -1.53
HERPUD1-206ENST00000563343 ARL2BPQ9Y2Y0 163 aa5.51□□□□□ -1.53
HERPUD1-206ENST00000563343 IGHV3OR16-8A0A075B7F1 116 aa5.5□□□□□ -1.53
HERPUD1-206ENST00000563343 A0A1W2PPK0 400 aa5.5□□□□□ -1.53
HERPUD1-206ENST00000563343 FOXI3A8MTJ6 420 aaPredicted RBP5.5□□□□□ -1.53
HERPUD1-206ENST00000563343 CREBL2O60519 120 aaPredicted RBP5.5□□□□□ -1.53
HERPUD1-206ENST00000563343 MRPS14O60783 128 aaKnown RBP5.5□□□□□ -1.53
HERPUD1-206ENST00000563343 DCTN3O75935 186 aa5.5□□□□□ -1.53
HERPUD1-206ENST00000563343 IFNA21P01568 189 aa5.5□□□□□ -1.53
HERPUD1-206ENST00000563343 IFNA17P01571 189 aa5.5□□□□□ -1.53
HERPUD1-206ENST00000563343 REG1AP05451 166 aa5.5□□□□□ -1.53
HERPUD1-206ENST00000563343 SRMP19623 302 aa5.5□□□□□ -1.53
HERPUD1-206ENST00000563343 C4BPBP20851 252 aa5.5□□□□□ -1.53
HERPUD1-206ENST00000563343 CALB2P22676 271 aa5.5□□□□□ -1.53
HERPUD1-206ENST00000563343 KRTAP10-2P60368 255 aa5.5□□□□□ -1.53
HERPUD1-206ENST00000563343 TPBGQ13641 420 aa5.5□□□□□ -1.53
HERPUD1-206ENST00000563343 OR2G6Q5TZ20 316 aa5.5□□□□□ -1.53
HERPUD1-206ENST00000563343 MORN3Q6PF18 240 aaPredicted RBP5.5□□□□□ -1.53
HERPUD1-206ENST00000563343 SPATA12Q7Z6I5 190 aa5.5□□□□□ -1.53
HERPUD1-206ENST00000563343 AMIGO2Q86SJ2 522 aa5.5□□□□□ -1.53
HERPUD1-206ENST00000563343 UBE2DNLQ8IWF7 75 aa5.5□□□□□ -1.53
HERPUD1-206ENST00000563343 PUSL1Q8N0Z8 303 aaKnown RBP5.5□□□□□ -1.53
HERPUD1-206ENST00000563343 C18orf15Q96N68 181 aa5.5□□□□□ -1.53
HERPUD1-206ENST00000563343 UQCC2Q9BRT2 126 aa5.5□□□□□ -1.53
HERPUD1-206ENST00000563343 CABLES2Q9BTV7 478 aa5.5□□□□□ -1.53
HERPUD1-206ENST00000563343 OR51E2Q9H255 320 aa5.5□□□□□ -1.53
HERPUD1-206ENST00000563343 KCNK15Q9H427 330 aa5.5□□□□□ -1.53
HERPUD1-206ENST00000563343 AMBNQ9NP70 447 aa5.5□□□□□ -1.53
HERPUD1-206ENST00000563343 SMPXQ9UHP9 88 aa5.5□□□□□ -1.53
HERPUD1-206ENST00000563343 MGAT4AQ9UM21 535 aa5.5□□□□□ -1.53
HERPUD1-206ENST00000563343 POMPQ9Y244 141 aa5.5□□□□□ -1.53
HERPUD1-206ENST00000563343 LOC100996750A0A140TA64 210 aa5.49□□□□□ -1.53
HERPUD1-206ENST00000563343 DPPA5A6NC42 116 aa5.49□□□□□ -1.53
HERPUD1-206ENST00000563343 TMEM14DPA8MWL7 114 aa5.49□□□□□ -1.53
HERPUD1-206ENST00000563343 NDUFA4O00483 81 aa5.49□□□□□ -1.53
HERPUD1-206ENST00000563343 CHEK1O14757 476 aa5.49□□□□□ -1.53
HERPUD1-206ENST00000563343 SOCS1O15524 211 aa5.49□□□□□ -1.53
HERPUD1-206ENST00000563343 ZNF207O43670 478 aaKnown RBP5.49□□□□□ -1.53
HERPUD1-206ENST00000563343 KBTBD11O94819 623 aa5.49□□□□□ -1.53
HERPUD1-206ENST00000563343 GSTT2P0CG29 244 aa5.49□□□□□ -1.53
HERPUD1-206ENST00000563343 GSTT2BP0CG30 244 aa5.49□□□□□ -1.53
HERPUD1-206ENST00000563343 PTBP1P26599 531 aaKnown RBP eCLIP5.49□□□□□ -1.53
HERPUD1-206ENST00000563343 TFPI2P48307 235 aa5.49□□□□□ -1.53
HERPUD1-206ENST00000563343 ETV1P50549 477 aa5.49□□□□□ -1.53
HERPUD1-206ENST00000563343 XGP55808 180 aa5.49□□□□□ -1.53
HERPUD1-206ENST00000563343 TMEM50BP56557 158 aa5.49□□□□□ -1.53
HERPUD1-206ENST00000563343 YIF1BQ5BJH7 314 aa5.49□□□□□ -1.53
HERPUD1-206ENST00000563343 IGSF11Q5DX21 431 aa5.49□□□□□ -1.53
HERPUD1-206ENST00000563343 LEMD1Q68G75 181 aa5.49□□□□□ -1.53
HERPUD1-206ENST00000563343 TRPT1Q86TN4 253 aaKnown RBP5.49□□□□□ -1.53
HERPUD1-206ENST00000563343 VKORC1L1Q8N0U8 176 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms