RNA–Protein interactions for RNA: ENST00000562874.2

SF3B3-203, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 401 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-203ENST00000562874 ATP5G2Q06055 141 aa11.97□□□□□ -0.49
SF3B3-203ENST00000562874 C15orf32Q32M92 178 aa11.97□□□□□ -0.49
SF3B3-203ENST00000562874 ZNF66Q6ZN08 573 aa11.97□□□□□ -0.49
SF3B3-203ENST00000562874 TTC9CQ8N5M4 171 aa11.97□□□□□ -0.49
SF3B3-203ENST00000562874 TMEM167AQ8TBQ9 72 aa11.97□□□□□ -0.49
SF3B3-203ENST00000562874 SLC5A7Q9GZV3 580 aa11.97□□□□□ -0.49
SF3B3-203ENST00000562874 SELENOKQ9Y6D0 94 aa11.97□□□□□ -0.49
SF3B3-203ENST00000562874 TRBV9A0A0B4J1U6 114 aa11.96□□□□□ -0.49
SF3B3-203ENST00000562874 DPPA5A6NC42 116 aa11.96□□□□□ -0.49
SF3B3-203ENST00000562874 SULT1C2O00338 296 aa11.96□□□□□ -0.49
SF3B3-203ENST00000562874 HLA-AP01891 365 aaKnown RBP11.96□□□□□ -0.49
SF3B3-203ENST00000562874 IL6RP08887 468 aaPredicted RBP11.96□□□□□ -0.49
SF3B3-203ENST00000562874 TIMM50Q3ZCQ8 353 aa11.96□□□□□ -0.49
SF3B3-203ENST00000562874 SGPP2Q8IWX5 399 aa11.96□□□□□ -0.49
SF3B3-203ENST00000562874 SPAG16Q8N0X2 631 aa11.96□□□□□ -0.49
SF3B3-203ENST00000562874 OR51H1Q8NH63 302 aa11.96□□□□□ -0.49
SF3B3-203ENST00000562874 VSTM2AQ8TAG5 236 aa11.96□□□□□ -0.49
SF3B3-203ENST00000562874 IFT46Q9NQC8 304 aa11.96□□□□□ -0.49
SF3B3-203ENST00000562874 DIABLOQ9NR28 239 aa11.96□□□□□ -0.49
SF3B3-203ENST00000562874 ZNF257Q9Y2Q1 563 aa11.96□□□□□ -0.49
SF3B3-203ENST00000562874 NBEAL2Q6ZNJ1 2754 aa11.96□□□□□ -0.5
SF3B3-203ENST00000562874 DNAH7Q8WXX0 4024 aa11.95□□□□□ -0.5
SF3B3-203ENST00000562874 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.95□□□□□ -0.5
SF3B3-203ENST00000562874 A0A0A6YYH2 397 aa11.95□□□□□ -0.5
SF3B3-203ENST00000562874 A6NJ64 397 aa11.95□□□□□ -0.5
SF3B3-203ENST00000562874 AIREO43918 545 aa11.95□□□□□ -0.5
SF3B3-203ENST00000562874 ZNF735P0CB33 412 aa11.95□□□□□ -0.5
SF3B3-203ENST00000562874 RPA2P15927 270 aa11.95□□□□□ -0.5
SF3B3-203ENST00000562874 OR4A47Q6IF82 309 aa11.95□□□□□ -0.5
SF3B3-203ENST00000562874 ZNF818PQ6ZRF7 136 aa11.95□□□□□ -0.5
SF3B3-203ENST00000562874 ZMAT4Q9H898 229 aa11.95□□□□□ -0.5
SF3B3-203ENST00000562874 FBXL7Q9UJT9 491 aa11.95□□□□□ -0.5
SF3B3-203ENST00000562874 TRAV3A0A0B4J244 114 aa11.94□□□□□ -0.5
SF3B3-203ENST00000562874 CGB1A6NKQ9 187 aa11.94□□□□□ -0.5
SF3B3-203ENST00000562874 NDUFB8O95169 186 aa11.94□□□□□ -0.5
SF3B3-203ENST00000562874 HRASP01112 189 aa11.94□□□□□ -0.5
SF3B3-203ENST00000562874 RPS19P39019 145 aaKnown RBP11.94□□□□□ -0.5
SF3B3-203ENST00000562874 KIR2DS2P43631 304 aa11.94□□□□□ -0.5
SF3B3-203ENST00000562874 RPL8P62917 257 aaKnown RBP11.94□□□□□ -0.5
SF3B3-203ENST00000562874 CATR1Q13166 79 aa11.94□□□□□ -0.5
SF3B3-203ENST00000562874 TATDN3Q17R31 274 aa11.94□□□□□ -0.5
SF3B3-203ENST00000562874 UBE2NLQ5JXB2 153 aa11.94□□□□□ -0.5
SF3B3-203ENST00000562874 LCN12Q6JVE5 192 aa11.94□□□□□ -0.5
SF3B3-203ENST00000562874 ADAMTSL5Q6ZMM2 481 aa11.94□□□□□ -0.5
SF3B3-203ENST00000562874 SAMD12Q8N8I0 201 aa11.94□□□□□ -0.5
SF3B3-203ENST00000562874 NECAP1Q8NC96 275 aa11.94□□□□□ -0.5
SF3B3-203ENST00000562874 OR5AP2Q8NGF4 316 aa11.94□□□□□ -0.5
SF3B3-203ENST00000562874 YIPF6Q96EC8 236 aa11.94□□□□□ -0.5
SF3B3-203ENST00000562874 CCDC140Q96MF4 163 aa11.94□□□□□ -0.5
SF3B3-203ENST00000562874 THAP7Q9BT49 309 aaPredicted RBP11.94□□□□□ -0.5
SF3B3-203ENST00000562874 HRASLSQ9HDD0 168 aa11.94□□□□□ -0.5
SF3B3-203ENST00000562874 C19orf73Q9NVV2 129 aa11.94□□□□□ -0.5
SF3B3-203ENST00000562874 EHFQ9NZC4 300 aa11.94□□□□□ -0.5
SF3B3-203ENST00000562874 PEMTQ9UBM1 199 aa11.94□□□□□ -0.5
SF3B3-203ENST00000562874 NPIPB5A8MRT5 1133 aa11.93□□□□□ -0.5
SF3B3-203ENST00000562874 H0Y980 276 aa11.93□□□□□ -0.5
SF3B3-203ENST00000562874 S1PR2O95136 353 aa11.93□□□□□ -0.5
SF3B3-203ENST00000562874 HLA-GP17693 338 aa11.93□□□□□ -0.5
SF3B3-203ENST00000562874 TAS2R20P59543 309 aa11.93□□□□□ -0.5
SF3B3-203ENST00000562874 HERV-K104P61576 105 aa11.93□□□□□ -0.5
SF3B3-203ENST00000562874 TMEM69Q5SWH9 247 aa11.93□□□□□ -0.5
SF3B3-203ENST00000562874 AADACL3Q5VUY0 350 aa11.93□□□□□ -0.5
SF3B3-203ENST00000562874 GTSCR1Q86UQ5 136 aa11.93□□□□□ -0.5
SF3B3-203ENST00000562874 SLC25A42Q86VD7 318 aa11.93□□□□□ -0.5
SF3B3-203ENST00000562874 Q8N402 240 aa11.93□□□□□ -0.5
SF3B3-203ENST00000562874 MUC7Q8TAX7 377 aa11.93□□□□□ -0.5
SF3B3-203ENST00000562874 DYNLRB2Q8TF09 96 aa11.93□□□□□ -0.5
SF3B3-203ENST00000562874 CACNG8Q8WXS5 425 aa11.93□□□□□ -0.5
SF3B3-203ENST00000562874 FANCD2OSQ96PS1 177 aa11.93□□□□□ -0.5
SF3B3-203ENST00000562874 TM2D3Q9BRN9 247 aa11.93□□□□□ -0.5
SF3B3-203ENST00000562874 FXYD6Q9H0Q3 95 aa11.93□□□□□ -0.5
SF3B3-203ENST00000562874 PLEKHA3Q9HB20 300 aa11.93□□□□□ -0.5
SF3B3-203ENST00000562874 SLC2A9Q9NRM0 540 aa11.93□□□□□ -0.5
SF3B3-203ENST00000562874 BET1LQ9NYM9 111 aa11.93□□□□□ -0.5
SF3B3-203ENST00000562874 XRCC3O43542 346 aa11.92□□□□□ -0.5
SF3B3-203ENST00000562874 PMP2P02689 132 aa11.92□□□□□ -0.5
SF3B3-203ENST00000562874 RLN1P04808 185 aa11.92□□□□□ -0.5
SF3B3-203ENST00000562874 PSMB6P28072 239 aa11.92□□□□□ -0.5
SF3B3-203ENST00000562874 MAS1LP35410 378 aa11.92□□□□□ -0.5
SF3B3-203ENST00000562874 CBX5P45973 191 aa11.92□□□□□ -0.5
SF3B3-203ENST00000562874 MSMO1Q15800 293 aa11.92□□□□□ -0.5
SF3B3-203ENST00000562874 CD300EQ496F6 205 aaPredicted RBP11.92□□□□□ -0.5
SF3B3-203ENST00000562874 CLEC19AQ6UXS0 136 aa11.92□□□□□ -0.5
SF3B3-203ENST00000562874 WFDC10AQ9H1F0 79 aa11.92□□□□□ -0.5
SF3B3-203ENST00000562874 ZC4H2Q9NQZ6 224 aa11.92□□□□□ -0.5
SF3B3-203ENST00000562874 DMRT1Q9Y5R6 373 aa11.92□□□□□ -0.5
SF3B3-203ENST00000562874 MFSD2BA6NFX1 497 aa11.91□□□□□ -0.5
SF3B3-203ENST00000562874 C3orf84H3BNL1 204 aa11.91□□□□□ -0.5
SF3B3-203ENST00000562874 OR2C1O95371 312 aa11.91□□□□□ -0.5
SF3B3-203ENST00000562874 EIF4EP06730 217 aaKnown RBP11.91□□□□□ -0.5
SF3B3-203ENST00000562874 CTRB1P17538 263 aa11.91□□□□□ -0.5
SF3B3-203ENST00000562874 ARL3P36405 182 aa11.91□□□□□ -0.5
SF3B3-203ENST00000562874 RFX2P48378 723 aa11.91□□□□□ -0.5
SF3B3-203ENST00000562874 CD81P60033 236 aa11.91□□□□□ -0.5
SF3B3-203ENST00000562874 NCS1P62166 190 aa11.91□□□□□ -0.5
SF3B3-203ENST00000562874 CTRB2Q6GPI1 263 aa11.91□□□□□ -0.5
SF3B3-203ENST00000562874 ZBTB34Q8NCN2 500 aa11.91□□□□□ -0.5
SF3B3-203ENST00000562874 DMBX1Q8NFW5 382 aa11.91□□□□□ -0.5
SF3B3-203ENST00000562874 TSPAN14Q8NG11 270 aa11.91□□□□□ -0.5
SF3B3-203ENST00000562874 S100A16Q96FQ6 103 aaKnown RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 169.4 ms